MSTRG.19405.1.p1 (mRNA) -

Overview
NameMSTRG.19405.1.p1
Unique NameMSTRG.19405.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000221_pilon:458809..460113+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.19405.1.p1 ID=MSTRG.19405.1.p1|Name=MSTRG.19405.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1305bp|location=Sequence derived from alignment at sc0000221_pilon:458809..460113+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCAAAGAATTGACTTTTAGGGTTTTTTCACTTTATAAATTTGATTAcag agaaaagaaaagtaaaataaatcttCGGAATGGAAAACGAACAACCAGCT GTCAACAACCAtttgaataatgatgaaatggACGTAAGATTTGTATTTCa taagataataataataataataaagaaataaGACAATCTTAAGGCTccat ttttttacatgaatGTTTGGGAtgttgaattatttttatcaaaaaaataa aacataaagtGTTGACTTCTACGTTTGAATCCAAAGTTTCATCTAATAGG TTTGGATTGCTTTGAATAACTTAAATTAACAAAATAAGACATACTTTATT CTAATTCAGGAAAAATTACCAACGATTCCAATTCCACCTTCTGAGAAGTC CAATGGTCGTGTTTTCTTGGAGAGTCTGTTGAACAAAACAGTGAAGATTG AAATTACAGATGGGCGTACATTGATTGGTACATATTTGTGCACTGATCga gagaaaaacatcattttaGGATCTTGCCAAGAATTCATCGCTAATCCAGG TTTCTTGcattacgttttttttttatttgttgattTAACCCTACTATTTA AGCCCCTTTAACTGATTAATCTGCCTCATCTATAAAAACAACTGAGACGT TTTTAATCTGCTAcaatatttaagaaaaattaagcaATTTTACCAGCAAA GAAAGAATTTGAAGGTGTTAGCGAAATTATCAGGTACAGTAGGACCTGTT CTGCCTGGTATGTGTGTCTGCTCTATAGATAGTAGAAGAGAGAAGTTTGC AAAGAGTTTTGAAACATATGGAAAAATTTAATCACTTTAACTTTTGCAAG TTTTATaaacatatatatatataataacaTCCTTTCATTTTCAGAGACTA GCTTAGAGGAACCAAGGCTTCTTGGATTAGCAATGATCCCTGGGAGGCAT GTTAAATCTCTCCATGCTGACATTGACAATGAATTCCATTTAGCGTTAAA AGATATCTTGAAATCTTCTGTTAAAGATTGAATCGATTGATGCAAGGAGG CTAATCGATGGTCTAGTATAAAGCTCACCAAATTTGAGGTGGATCTACAA TTTGGTTCTTAACATTTGGAGGAGTTATGTTAAAGATACCCAAGCATTTA TGTCACAACATTGATGAAATGTTTTCATCCAACAATTTCTTGGAATGCTG TTTTAATGCTTTCATAACTGAAATTCTTTAtcagaattttctttttaaat tgtaAAAGAAATAACAAATGTTAAGACTGATATATTTTGTGTCAATTCAT TTTCT

Coding sequence (CDS) from alignment at sc0000221_pilon:458809..460113+

>MSTRG.19405.1.p1 ID=MSTRG.19405.1.p1|Name=MSTRG.19405.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1143bp|location=Sequence derived from alignment at sc0000221_pilon:458809..460113+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAACGAACAACCAGCTGTCAACAACCAtttgaataatgatgaaat
ggACGAAAAATTACCAACGATTCCAATTCCACCTTCTGAGAAGTCCAATG
GTCGTGTTTTCTTGGAGAGTCTGTTGAACAAAACAGTGAAGATTGAAATT
ACAGATGGGCGTACATTGATTGGTACATATTTGTGCACTGATCgagagaa
aaacatcattttaGGATCTTGCCAAGAATTCATCGCTAATCCAGAGACTA
GCTTAGAGGAACCAAGGCTTCTTGGATTAGCAATGATCCCTGGGAGGCAT
GTTAAATCTCTCCATGCTGACATTGACAATGAATTCCATTTAGCGTTAAA
AGATATCTTGAAATCTTCTGTTAAAGATTGAATGGAAAACGAACAACCAG
CTGTCAACAACCAtttgaataatgatgaaatggACGAAAAATTACCAACG
ATTCCAATTCCACCTTCTGAGAAGTCCAATGGTCGTGTTTTCTTGGAGAG
TCTGTTGAACAAAACAGTGAAGATTGAAATTACAGATGGGCGTACATTGA
TTGGTACATATTTGTGCACTGATCgagagaaaaacatcattttaGGATCT
TGCCAAGAATTCATCGCTAATCCAGAGACTAGCTTAGAGGAACCAAGGCT
TCTTGGATTAGCAATGATCCCTGGGAGGCATGTTAAATCTCTCCATGCTG
ACATTGACAATGAATTCCATTTAGCGTTAAAAGATATCTTGAAATCTTCT
GTTAAAGATTGAATGGAAAACGAACAACCAGCTGTCAACAACCAtttgaa
taatgatgaaatggACGAAAAATTACCAACGATTCCAATTCCACCTTCTG
AGAAGTCCAATGGTCGTGTTTTCTTGGAGAGTCTGTTGAACAAAACAGTG
AAGATTGAAATTACAGATGGGCGTACATTGATTGGTACATATTTGTGCAC
TGATCgagagaaaaacatcattttaGGATCTTGCCAAGAATTCATCGCTA
ATCCAGAGACTAGCTTAGAGGAACCAAGGCTTCTTGGATTAGCAATGATC
CCTGGGAGGCATGTTAAATCTCTCCATGCTGACATTGACAATGAATTCCA
TTTAGCGTTAAAAGATATCTTGAAATCTTCTGTTAAAGATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.19405MSTRG.19405Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19405.1.p1MSTRG.19405.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19405.1.p1.exon1MSTRG.19405.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.19405.1.p1.exon2MSTRG.19405.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.19405.1.p1.exon3MSTRG.19405.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000221_pilongenomesc0000221_pilon:458809..460113 +