MSTRG.19385.1.p1 (mRNA) -

Overview
NameMSTRG.19385.1.p1
Unique NameMSTRG.19385.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000221_pilon:10855..12431+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.19385.1.p1 ID=MSTRG.19385.1.p1|Name=MSTRG.19385.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1577bp|location=Sequence derived from alignment at sc0000221_pilon:10855..12431+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAAGGAACATCTATCAGTGGACATCTTAGAGAAAGCTTTATATCACGAA GATCATCTTCTCATACCTCTACCAAAAGCAAGAACCATACATAAAATTGA TTCCCAACCCATTGAGCCACCACCATTCCAGCCACAAGATCAGGTACCAG CCGCTACAGATCAACCACATGACAGCGGTGCAAGCTCAACCGATCAGGAT GGTAGTGAACCTGTCACAACACCTCCCAAAGGATTGATAATGAAAGTTTC TCCACTTCTTGATGTTGATATTGTGGTTCCGCTTAGTGACGTCATTAGCC AGGTAACATGCTCTATTTTCATTAGCTCTTGACTCCCGTCTTGGAGGTCT GAGTTCGATGCTAACCATGATACTACATCTCATCTGACAAGTCCAAATCA TACCCTGCCGCGGGATGGATACGTGAAGTGTCAAAAGATTTAGGCATTGT GCAAAGTGCTGTAGGTTCGGCCTCACGATTGACATGTATCGTTTGAGTGT CAAGGTATATGCCATGACTCAGCAGCTCGTAGCCATAAAGTTTTAATGCA GTGAAATTATATTATACCTCATTGGGTTTGATTTTATAGTAGCTATTTCT TAGGCTCCAGGTTTCAGGTTCCAAATAAATCTTTGTTGTATTTTAGTTAT TCTCCGATTCTCCGATGTGTTTATCGCAATGTTcgcaaaattattcaaaa tagtGATTTCTAATTGTCCTAATTGAATTGTTCTCTGTCTTTTCCATTGT GTAGATTTGTTTGGATCTTGGAAGTTATTATTTTCCGAAAGAGATGTTTG GAGATGCAGGGCGCGTTTTTCAGAGAGCGTACGACGTTCTGGTGAGTTAA ATCTTTTATTGCCCGCCTCATTCGAAAAATTTGTGGGAGGGGAAAatgca ttgagtttcaagcccgaagggctagaggcgaaactttaacccttttcagg caagagaaattgaagctacttatttcctatccaaaacgcgcatagaacgc gccgtaatcatgatgatggattgtatctagcggttcctttgttttggagg actacattttttgaaatctagcgatagattttagtttcaatccggcgttt gtgtaaaaactacgctcGGCGTCTcgtctctagcccttcgggctcgAAAC TCAATGGGAAAAAGGGGCTTAGCTTTGATTCGAGGGATGATGAACGTGTT AAGCTTCAGTTTGTTGAGTGTCCTCGACAAGGACTCGGCCTGAATCTTAT ATAAGAAGTTATATTTACGACGTATTTATGACGTTGCATTTACAACACTG CAATAATGATGCGAGTTATGATTTACGGCCTAACCGAGTCAGCCCAATAG CCGTGGACAAAAATAGCTCTTAATCGAAATCTAGATAGATATAGATATGT GCGGCGTATATAGTTCcatgcttaacctcgctatttcAAATCAATTAACG TTCACGAGACGATCACAACATTTATCTTACAGGAGAAAGCCGGATTGAAG AACAAGCTGATTTCCAGTTTCCGTTTAGCCTGTTGTCATTTGACCAAACA GCCTGTACCCGATGCACTCAAACCAAG

Coding sequence (CDS) from alignment at sc0000221_pilon:10855..12431+

>MSTRG.19385.1.p1 ID=MSTRG.19385.1.p1|Name=MSTRG.19385.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1440bp|location=Sequence derived from alignment at sc0000221_pilon:10855..12431+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGGAACATCTATCAGTGGACATCTTAGAGAAAGCTTTATATCACGAAGA
TCATCTTCTCATACCTCTACCAAAAGCAAGAACCATACATAAAATTGATT
CCCAACCCATTGAGCCACCACCATTCCAGCCACAAGATCAGGTACCAGCC
GCTACAGATCAACCACATGACAGCGGTGCAAGCTCAACCGATCAGGATGG
TAGTGAACCTGTCACAACACCTCCCAAAGGATTGATAATGAAAGTTTCTC
CACTTCTTGATGTTGATATTGTGGTTCCGCTTAGTGACGTCATTAGCCAG
ATTTGTTTGGATCTTGGAAGTTATTATTTTCCGAAAGAGATGTTTGGAGA
TGCAGGGCGCGTTTTTCAGAGAGCGTACGACGTTCTGGAGAAAGCCGGAT
TGAAGAACAAGCTGATTTCCAGTTTCCGTTTAGCCTGTTGTCATTTGACC
AAACAGCCTGTACCCGATGCACTCAAACCAAAGGAACATCTATCAGTGGA
CATCTTAGAGAAAGCTTTATATCACGAAGATCATCTTCTCATACCTCTAC
CAAAAGCAAGAACCATACATAAAATTGATTCCCAACCCATTGAGCCACCA
CCATTCCAGCCACAAGATCAGGTACCAGCCGCTACAGATCAACCACATGA
CAGCGGTGCAAGCTCAACCGATCAGGATGGTAGTGAACCTGTCACAACAC
CTCCCAAAGGATTGATAATGAAAGTTTCTCCACTTCTTGATGTTGATATT
GTGGTTCCGCTTAGTGACGTCATTAGCCAGATTTGTTTGGATCTTGGAAG
TTATTATTTTCCGAAAGAGATGTTTGGAGATGCAGGGCGCGTTTTTCAGA
GAGCGTACGACGTTCTGGAGAAAGCCGGATTGAAGAACAAGCTGATTTCC
AGTTTCCGTTTAGCCTGTTGTCATTTGACCAAACAGCCTGTACCCGATGC
ACTCAAACCAAAGGAACATCTATCAGTGGACATCTTAGAGAAAGCTTTAT
ATCACGAAGATCATCTTCTCATACCTCTACCAAAAGCAAGAACCATACAT
AAAATTGATTCCCAACCCATTGAGCCACCACCATTCCAGCCACAAGATCA
GGTACCAGCCGCTACAGATCAACCACATGACAGCGGTGCAAGCTCAACCG
ATCAGGATGGTAGTGAACCTGTCACAACACCTCCCAAAGGATTGATAATG
AAAGTTTCTCCACTTCTTGATGTTGATATTGTGGTTCCGCTTAGTGACGT
CATTAGCCAGATTTGTTTGGATCTTGGAAGTTATTATTTTCCGAAAGAGA
TGTTTGGAGATGCAGGGCGCGTTTTTCAGAGAGCGTACGACGTTCTGGAG
AAAGCCGGATTGAAGAACAAGCTGATTTCCAGTTTCCGTTTAGCCTGTTG
TCATTTGACCAAACAGCCTGTACCCGATGCACTCAAACCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.19385MSTRG.19385Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19385.1.p1.exon1MSTRG.19385.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.19385.1.p1.exon2MSTRG.19385.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.19385.1.p1.exon3MSTRG.19385.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.19385.1.p1MSTRG.19385.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000221_pilongenomesc0000221_pilon:10855..12431 +