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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000210_pilon:511778..518343- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.18962.1.p1 ID=MSTRG.18962.1.p1|Name=MSTRG.18962.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6566bp|location=Sequence derived from alignment at sc0000210_pilon:511778..518343- (Clytia hemisphaerica_ch_hm2_pilon)
TCATCATTAATGGTTTTACCTAGATCGTCTATCTAGGTAAGTGTCTAGAA
GAGAAGAAGAGGGGGGTCCCATCCCATCCCCAGAGCCAGAGCCAGATGCC
AGAGCCAGACGGTAGAGTCAGTTCGCCAGTGCACGAACGACCCCAGTGCA
CGAACGAGCGTCTTTGAACTTGAAAAAAATAGACTGGGTTCGAATAGCGC
TCGCTTTAACGACTTATTATTCCAAGAAGAAGCTTTCAAAAAAGTGAAAA
CAAACTGAAAGAAGGACTTCAAGCTTGTTTACGAGATGGTCAAAAAGGAT
TTATGTAAAAACCAAAAGTAAGTGAAAAAAGTGAAAAATAAGTTTGCCGT
TCGTGCACTGGGCACCCCCCTCTACTAATCGAACGTTTGATTATTGTTAG
CGACTCCAGAAGTCACGCAACTATCGTTGACGTCAAACCAAATGTTTCAT
TTTTCCGTGAACTTTGAACCCTTCTAACTTTTCTTCTATGTATGCTAAAG
CGTTCCGGTTTTTACTAAAAGAAAGCCCGTGATCTTAGCTTTCCAGCGGT
ATATAACACTGCGGACACGGGCTAGACGGCAAATTGGTAAAATGCCGAAC
GTTTTGCAACATTTTGAAAATTGTTTGCCGACGGGAGAAAAGAAATTTGC
AACTTTCAAAGAATAAATGTGTCTGGAAACGGAGGAAAAAGTAATTGGAG
GCTGAAACTTTGTATGTTTATCAGAAAAAGGGTGAGGAATTCAAAAATCA
CATTCGCTAATTCTAGTTCTTTCATTTTCATGTAGTTTTTTTAACTTTTT
TGCTTCTTTAGCATGGGAATGTCCCAAAAAAAAGTTTTTATTTCTGCCGA
AATGGATTTTCTTTTCATTTGGGGTTTCTACTTTCAGAAAAACTTATTCT
CTACTCATTTTGTTCCTCCATTTCCAGAGGCCCCTTGAAAATGGGTCCTA
CCACCTTTTTTGACTCATTTCAACCTTTTCCAAGCTATTTTCTTCAAAAA
CAAAAATAAAACAATGCAATGTCTTCTTTTTTCAAAAAAAGATATATCTT
TTGTTATTTTGATAAATATACTAAATATTTTACAAACATTTTTATATAAT
AATATTTTAACACCATCAAAGAATTCTCCCTCCAAATTTGAGGTCTCTAG
CTACACTAGAAAAAGAGATATGCAAAATTTAAGAAGCATGACTGGAAAAT
TTCTTTTTTTTCTTTTTTGACACATTTTTCGAATTTTTCCAAGCTATTTT
CCTAACCTTTTTTTGACATTTTTAGTCAAAATTTTGACACTAAAATTTGA
ATATCTTTACAACCACTTATCCTCTGGAGGCCTATGACCCCTCATTTTCT
TTCTTTTTCAAAGCTCTACAAGATAGGATAGATTTTGAAAAAAAAATTAA
AACTTGAAAAATCTTCTGGAGTTGCTATTATTGTGCGTGATCGAAGTAAT
CAATAATGATCTAAAATAATCAAAGGTAGTCAGTGACCACCTATCGATTT
TATGGGAGATTGATTATTCAATCGACTCCAAATTATGACGTTTTCTTCAA
CCATTTTTTATTCGTGCGATCATTTCGATTCGTTCGATCATATTTTGTTA
CAATCATATTGATTGAATACCTTTGATCATGTTGAATACCTTCGATCATA
TTGAATACCTTCGATCATACAGTTACATCAAAATGCCTCGAAAATGTCAA
TATGAAAATTGCGTAATAAGAGAACGTATGTCTCGCTCATTATAAAAAGG
CCGAGACAAACTTTCAATAATTGGATTGTAACATCGAGTTAAGTCTCTTT
TGTTAAGTCACCAGGGGGTAAATAAAACAGACCTTGATACATTTATCGTT
CGTTTCAACTTGACCATTTGTTTCAAACTCAGCCTCCTAAATATTAGGGG
TAGGTAAAATATGTACAAAGATATTCATACTTTTCCAACCCGGCCAATCT
TTAAAAAAGAAGCGAACAATAAAATGTAATTACCCTTTCCAAATAAACCT
CTTCGGTGGCGAGCGTAGTCTACTCTGACGTAATTGTAAAATTTATGTAA
TGGGAGTTTGACATAGTAATGTAATGATGTTTGGGGAATTATGAAGTTCT
CTGGGATTTCGATTGCATTTATTCAGGTTGATTTTTTATGACTTCTAATG
GTACTTTTTCTAACGAGTTTGATTACTCTGTTCTCACACTTATGTCTTTT
TTTTTTCGCGTCCTTTTCCGTGATTACTTTTATTTATATTTTTAAAGACA
GGTAAGAAGGCATATTGATGTAACTGTCATATTGAATACCTTCGATCATA
TTGAATAATCATAATAATAATTTATTTGTCACGTGACTATGGTTGGTTTT
TGGTAGCAATATTCAACAACAAAATATTCATTCAATAAAAAAACAAATTT
ATATTCAACAATTTCATTTTCATATTCAAGAGAAAATTGGTCGGCTAGTT
CGAAACACGGGTCACGGGTCACGGGTTACGGGGCACGGGGTACGGGTCAC
GGGTCACGGGGCACGGGGCATACAATTTACAGACCGGAAAAAATATAACG
ATATCATGACGTATAATTCATTACACGTACTACATAACACATATAATAGT
ACTAATAATACTAGTATAGTATGCCTGAAACAATTATATACGAATAGTAT
TATCATGAAAATTTTTAAATAATATGTCACCCACAAATTTTGACAAAATG
ATATTGAATGACAAAAATATTGTCAAAATCATGAAATATAAGGCCTCTGA
ACCAATTTACAGCAAAATGTTTTTTCATACTCAATAGGATGCTAATCATG
TGACTGGATATAGATTGACATGTGTTAAAACGATTAAATGCTGCAAGATA
GTGGTTTTAGAGATATGAGTATAATTACGTCATTTTTATTAAAAATTCAT
AATGGTAGGTGGAAAATATTGACACATTTATAAAATACCATCATTTCTAC
GTTATTATCCATTAAAATTATATTCATACTCATAGTGATGGAGGGGATAT
AATGAGATATGATTTAACAATAGCTGTACTATCATTTTCTGGAGAAAGCT
CGGTTTTGAGGTGATGGGAATTGTAATATGTATATTACTTACGTATAACA
TATAACATGCATATAACACTAAAAGTGTATTATTTATAATATAAGCTTAT
TATATGTATGTAATATGTTGCGGTGTTTTCTGGTCTGCATTATACACGAC
GCAAACTTCGAAAGCACGTGGAAAGCACGTGGTTAGGTTTTAGCGTTTTA
AATAGTCATACGTGGATAAAATACCTTAAAATTGATTTTTTCGATAATTT
TTAGTGTTTTTAAAACATTTTCTGTTTGAATTACTTTGATCTGAGCTGCC
CCGTGACCCCGTGACCCGTGCCCCGTGCCCCGTAACCCGTGCCCCGTGCC
CCGGACCCGTGACCCGGAACCCGTGTTTCGAACTAGCCGAAAATTGGTTC
AACAAGATAAAAAAAATTATCCAAGAATGATAATTATATGTGCAGAAAAA
AATAATGTGCAAGTGATTTTAAGTGATTCTACATATTGAGGACATTGTTC
AAGTACGTAAAGCGTAGTTTTAGTTAGTTTTATCAAACTCTGTAACAATT
TTTGGTATAATACTAAATCGAATGTCAAGAAGAAGGTGGCCCTCTGGCCA
AGGAGGGCACTGACCTTGACAGTCGGCAGGGCCGCTGGAGATTGAAAAGT
GGACCATGTCAGATATGAATGTTTGGTAAGGGGTCACTCACAAATCGATT
TTAGGTTAGAAAAACGTCAATTGACGTATATGGGGGGGGGTGGGATAAAG
ATTGTTGACGTTTTTTTTTCAAATCCAGAAACATCAATTTTTCATTCCAT
GCCAAAAATTACTTCTCGCCATGTTTCTGTTTGATCGCTTCTTCTGTTTT
AAAAACCAAAACAAACGGCCCAATGTTTATGTCTTTTATTTGTTTGACAG
CCTGAACGGCCCTTGAATTTTTGCAGATGGCCGTTCTTTGCGCTACATAT
TACGAAGATAATTAATTGCGGGAATTTTGTGAACAAGTTTATAAATTATC
TCTGTTTCGTTTTTTTTCAAATATAAACTATGCGAGCCGTAGTGGAAATC
AAGATGGCTGACGAAACAGCAATGAAGGCAGTTTTTCATTGATTTTCGGG
GATATCAAGGTGTTTGACGTTTTTGGGTGTGGGTGGGTGGGTCAGCTTTT
AAAACGTCAATTGACGTTTTTCTGACCTAAAATCGATTTGTGAGTGACCC
CTAAGTTCTCCCCTAATAAGCGCTGTGGTGGAAAAACTGTCCATAACTCT
GACATTCAAACAACGGTTAAGTTAATCACCAGGATTAACTTATTGAAAGT
TAATCACAATTTAACCTAATCGATTTTTGAACAACCAGGCCCAGCTGTTT
AAAATATAATTCATCATTATCATAACAATATCTGATACCAAATGACACCT
GTCTACCTTGTTCCCTAATCACTTATAATGTCTCTTTTAATCTTTTTTTA
TTCTCTAACAGGGAAAAAATTAAAAGATAAGATGTCACTTGAATCTCTTT
CGCGATATGATGATGCTGAAGACGAGATCAAAGATGAAGACCATGATTTA
GTTTTACAAACCAAGAAAAGTCTAGAGGCTATTCGTCCCCCATCAAGACC
TGTATCTGATGCTGAGAGTATCGGTGAACAGAGCAATAAACCAAAGAGTT
TAGTGTCTTATTTTGGAGATGCTTACGGTTCTAGTAGTGAAAGTGAAAAT
GATGATTCTGATGTAGATACAAGAACAACTGTAGTTAACCTGGGTTTACA
TGATGGTCAAGCATCCTCTCTTGAGAGTGGTTCACCTGCAACCATAGATC
TTGATACAGAGGGTGGTATTCGTGACAATTTAGATGATGTTCGCTTGCCA
CCTCAGCCTGAAGGAAGGTGCTCTAAATCATTACAAGAGAAAATTTTGAA
AATGTACGAACGTAAGATGGCAGGTATGGATGTGAATGAGTATGTACAGA
AGAAAAAGAACTTTCGGAACCCAAGCATTTATCAGAAACTTGTCAGTTAT
ATAGGTATTGATGAACATGGCACAAACTTCCCAAAACATATTTACGATCC
CTCCATATGGGGACCTGAGTCATATTACGAGGAACTTGCCAAAGCTCAAA
AAGAGTACAACGACAAGAAAGAGAAAGAAAAGAATAAAGCTAATAATCGA
GCCAAAGTTGAATTTGTGTCGGGAACTAAAAAACCACCTAGTACAGCGCC
ACTAGCAACTACTGCTGGCTCAGCTGTACCTGAAAAGAAATCAAAATGGG
ATCAAGGCCCTGGTAAAAAGTAACTTTTAAACCAGAGCGTTTCTTCAGGT
TTGTGTTCTACTCAAGCAAATGAACAATATTTTTGAACTGGAATGGTTAA
TTGTCTGATGATTTTGGATACTGAATATTATTATCGTCTTTTTTTGAAGA
CTAACAAAGAGTATGGAAATATTTATCCATCCAATGTGTGAGACAAATAA
ACAGCTTGATCTGAAAATGAGGTTAGTCATTGCTTTTCATAGAATTTCTG
TGAAATATATGTGAAATTTATAAAATTTCCTTAAAAACCATCTACAGTGC
TCAACCATGATCCATGGGTCCCCCAGGGTTCAGGTACCCCAAAATAGAAT
TCTAAAGAAGCCCCCCTCCCCCAACTTTGAGCTACCCCATTGGTCAGCAA
ATATGTTCTTCTCCTTGCGAGACTAGGTTTAAAGTACAAGAAGCAAACTG
GGTGAAAAGGGAAAGACAAACAAAGTTATAAAGTCTTCTGAATGAAAAGG
TTCGATTCAAAATTGGAAAATTGGGTTAGTCAAGGAAAATACTTCATACA
AAAACAACAGCCCCCGCCCCCACTAATGAAAATGCAGGTATCTCCAAACA
TATCAAGTACTCCCTGAATTTAAAGAATACTTCCAGGTATCTGGCTACTA
ACACTTATTTTTAGGTACCTCCAAATTTCTGGGGGGAGGGGTGGTGGACC
ATATGTGATCATATACCTGACCAACCTAACTCACAGAACATATCTTTGTT
GTTTTTTTTGTAAATTAGTTGTCAAGCAGACTTTGTAATTATAGATTGTA
TTGTTCAAAAGGAAACCCTTTTAGTTTTATTAATCTTAAAAGTATGACTT
TGATTTTGGATACTTAATTTTCCTTCTCGTCCAAAGGTTGGGAGAACCAT
CTAACAATTTAATTTGATATCCAAATTCGATACCCCTAGGAATTTGAGGT
GTACCTAGCATTTATGAGTCTCTTAAGGTAAAGCACAATGACTCCATCAT
ACATAAACATCCATTGATGAGCATAATCATCAACTTATTATAAGAAGCTT
ATAAAACCACTTAGCTAAGCATTGAGTCTTCTAAAAATACTTCAAACAAA
AATTGAAAATTTTTAATCCTGACATCCAGACCAGATTTTCTATTTTTGGT
TGTTCATCAATTGTCAAGTAGACTTATTGTATTGTATTGTTAAACCCAAA
CATTTTCATCTTTTAGTTTTTATCAATTTGCAGCACAACCTTATTTTTGG
ATACTTGTTTTCTTTC Coding sequence (CDS) from alignment at sc0000210_pilon:511778..518343- >MSTRG.18962.1.p1 ID=MSTRG.18962.1.p1|Name=MSTRG.18962.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=792bp|location=Sequence derived from alignment at sc0000210_pilon:511778..518343- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCACTTGAATCTCTTTCGCGATATGATGATGCTGAAGACGAGATCAA
AGATGAAGACCATGATTTAGTTTTACAAACCAAGAAAAGTCTAGAGGCTA
TTCGTCCCCCATCAAGACCTGTATCTGATGCTGAGAGTATCGGTGAACAG
AGCAATAAACCAAAGAGTTTAGTGTCTTATTTTGGAGATGCTTACGGTTC
TAGTAGTGAAAGTGAAAATGATGATTCTGATGTAGATACAAGAACAACTG
TAGTTAACCTGGGTTTACATGATGGTCAAGCATCCTCTCTTGAGAGTGGT
TCACCTGCAACCATAGATCTTGATACAGAGGGTGGTATTCGTGACAATTT
AGATGATGTTCGCTTGCCACCTCAGCCTGAAGGAAGGTGCTCTAAATCAT
TACAAGAGAAAATTTTGAAAATGTACGAACGTAAGATGGCAGGTATGGAT
GTGAATGAGTATGTACAGAAGAAAAAGAACTTTCGGAACCCAAGCATTTA
TCAGAAACTTGTCAGTTATATAGGTATTGATGAACATGGCACAAACTTCC
CAAAACATATTTACGATCCCTCCATATGGGGACCTGAGTCATATTACGAG
GAACTTGCCAAAGCTCAAAAAGAGTACAACGACAAGAAAGAGAAAGAAAA
GAATAAAGCTAATAATCGAGCCAAAGTTGAATTTGTGTCGGGAACTAAAA
AACCACCTAGTACAGCGCCACTAGCAACTACTGCTGGCTCAGCTGTACCT
GAAAAGAAATCAAAATGGGATCAAGGCCCTGGTAAAAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000210_pilon | genome | sc0000210_pilon:511778..518343 - |
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