MSTRG.18946.1.p1 (mRNA) -

Overview
NameMSTRG.18946.1.p1
Unique NameMSTRG.18946.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000210_pilon:365984..368057+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.18946.1.p1 ID=MSTRG.18946.1.p1|Name=MSTRG.18946.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2074bp|location=Sequence derived from alignment at sc0000210_pilon:365984..368057+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTGAGGGATATAAATAAGCTCGTTTTGTCACTTGAGAAATTAGTTGA CTTTTCTAACAAAACAAGAAGGACAAGAAGAAGAACAGAAAAGCAAGCAT GGAAATGGCGTCATCAATTCAAGTTCTGCTTACGACAACTTTCCTACTGT TCATTTTACCATATTCTCAATGTGGGTGCAGTTTGAAACACACTGGAAGA ACCTACGAAGGAGATGGTGAAGGTGAAGTGCAATACTTGGATCGTCATTA CGTCGATTGTTACAATGGAGCATTGAACTTCTTGAAACTTGAAAGAAGAA ACGGTGAGAATTGTTTTGTTCATATAATTTATTACGTCAATTGTGTGGCT GTCAGTATTGCATTAAGGTCTGGGGCcgcttgaaacatttttcatcaaat agaaacatttgaaaactgaaacacGCTTCACTTTGATGAAATCTGTTTCA AGTAGCTGTTAACGAGACGATTAATAGGCGCAATAAGATAGCATTATGGG TAATGGAGGGTCATTTCGGTAGATCAAGCCAGATCAATACAGGCCTCGAC CTCTTAAACATAGGATtggtgtaaaaaaaaattcctagcCGAATATAAAA GGCACGATTTGTATTTTCGATCTTGCAATAATTGTCACGGCCTCTTCAga gtatatttttcaaaactattcaTCTTGGCTGGTTTGGGACGGCTTTCGCC TTGGTACAAATATAAATTTACCGTCTTCAACTTTAGCTTATAGTGATATC AGATACGCATACAAATGCTGTGATCAAGGCCTTCTTGGTGTGAAATGGAG TGGAAAGACAAGCGAAAGATTGCTCATGGGTTTCAAAGGATCTCGTTACT CTATCTGGGAGTTGGGTAAAGGAGATGGCATGAAAATGGATTGCGGATCA GACGGAGCAATATCATCATTCGTGTTGAAAACCAACTGGTCCTTACACTT GGTATTTGGCCACTATGAATATACATGCGTCAAAATCAACAACAACCACT ACCCCCATTTCGAGCATAAATCTCAAAGGGCTCGTGTGAAGCGACATCTG GCATACCTGGATCGACTTCAAGCAAACTGTGGGAAAGGCGTCATCAAGTC ACACAAATTCAACTTGCCAGAAGGTGATGATTTGTCTCATATCAACAGTT GGGTCAAGATGGCTGAAGAGGTCTGGTGTAGATGTCCAACAGGAGGCTGt taagattttaatttcaaagatCATGAATTGGTACAGTGGGAACTCTTTAA CTTGAACCTTTATAATTAGAatgtccttaactcgaacaagtcttctcgtc ccttcagttaacctTACCTTATAAAttttactccataactcaaaatttgt ttAACTCAATCAAATTTGCTTTCCCTGTGCGggttcgagttattgagact cCGCTATACGTATTATAACatgatttcaaagataatgAATTggcataatt tttatttttaaagatatttaacaaattattttattgtagatttttagaga aacggctattttattGTTACTTTTTAGGCTTTAGACATTGGCTCTAACAT TCAATATTCACTCTGGTTACcgtaatgggctcttccagaaaagatttgaa tatgggggatgaaggatataacattttttagaaatttaccccgaacattg tgaattttgacccgtTGACAACGGATctcacccccggacaagcatcagtt gacgcCCCGgaaattcaaaatcacccctaatcagagAGCAAGTTTGCCCC TCTCAAAAGGAATGTTTtaataaccccccccccggacaaattATCTAATA TATCCTCCCCCCTtcccatgtacaaaaatttcctggaagagcccaattcg GAATTCCTAATAAAGTACCACGccaaattttgttcattttcgaACCAGCA TTTCGGTTGTCGATGATCTTTTTGAGAAGAATGGAATTCAAAAAAGTGCT TTCTGGCTTTCTTGCTTTTATTTCAATACaaaaaaaTAGCTAGAGTGAAT GtagtaaaaaattaatttttgggacTTTTGTAGAGTTTCTATTATATTAT TTAACTATAGAAGATGAAtgggaa

Coding sequence (CDS) from alignment at sc0000210_pilon:365984..368057+

>MSTRG.18946.1.p1 ID=MSTRG.18946.1.p1|Name=MSTRG.18946.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1344bp|location=Sequence derived from alignment at sc0000210_pilon:365984..368057+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAATGGCGTCATCAATTCAAGTTCTGCTTACGACAACTTTCCTACT
GTTCATTTTACCATATTCTCAATGTGGGTGCAGTTTGAAACACACTGGAA
GAACCTACGAAGGAGATGGTGAAGGTGAAGTGCAATACTTGGATCGTCAT
TACGTCGATTGTTACAATGGAGCATTGAACTTCTTGAAACTTGAAAGAAG
AAACGCTTATAGTGATATCAGATACGCATACAAATGCTGTGATCAAGGCC
TTCTTGGTGTGAAATGGAGTGGAAAGACAAGCGAAAGATTGCTCATGGGT
TTCAAAGGATCTCGTTACTCTATCTGGGAGTTGGGTAAAGGAGATGGCAT
GAAAATGGATTGCGGATCAGACGGAGCAATATCATCATTCGTGTTGAAAA
CCAACTGGTCCTTACACTTGGTATTTGGCCACTATGAATATACATGCGTC
AAAATCAACAACAACCACTACCCCCATTTCGAGCATAAATCTCAAAGGGC
TCGTGTGAAGCGACATCTGGCATACCTGGATCGACTTCAAGCAAACTGTG
GGAAAGGCGTCATCAAGTCACACAAATTCAACTTGCCAGAAGGTGATGAT
TTGTCTCATATCAACAGTTGGGTCAAGATGGCTGAAGAGGTCTGGTGTAG
ATGTCCAACAGGAGGCTGttaaATGGAAATGGCGTCATCAATTCAAGTTC
TGCTTACGACAACTTTCCTACTGTTCATTTTACCATATTCTCAATGTGGG
TGCAGTTTGAAACACACTGGAAGAACCTACGAAGGAGATGGTGAAGGTGA
AGTGCAATACTTGGATCGTCATTACGTCGATTGTTACAATGGAGCATTGA
ACTTCTTGAAACTTGAAAGAAGAAACGCTTATAGTGATATCAGATACGCA
TACAAATGCTGTGATCAAGGCCTTCTTGGTGTGAAATGGAGTGGAAAGAC
AAGCGAAAGATTGCTCATGGGTTTCAAAGGATCTCGTTACTCTATCTGGG
AGTTGGGTAAAGGAGATGGCATGAAAATGGATTGCGGATCAGACGGAGCA
ATATCATCATTCGTGTTGAAAACCAACTGGTCCTTACACTTGGTATTTGG
CCACTATGAATATACATGCGTCAAAATCAACAACAACCACTACCCCCATT
TCGAGCATAAATCTCAAAGGGCTCGTGTGAAGCGACATCTGGCATACCTG
GATCGACTTCAAGCAAACTGTGGGAAAGGCGTCATCAAGTCACACAAATT
CAACTTGCCAGAAGGTGATGATTTGTCTCATATCAACAGTTGGGTCAAGA
TGGCTGAAGAGGTCTGGTGTAGATGTCCAACAGGAGGCTGttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.18946MSTRG.18946Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18946.1.p1.exon1MSTRG.18946.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18946.1.p1.exon2MSTRG.18946.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18946.1.p1MSTRG.18946.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000210_pilongenomesc0000210_pilon:365984..368057 +