MSTRG.18945.3.p1 (mRNA) -

Overview
NameMSTRG.18945.3.p1
Unique NameMSTRG.18945.3.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000210_pilon:350153..352814+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.18945.3.p1 ID=MSTRG.18945.3.p1|Name=MSTRG.18945.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2662bp|location=Sequence derived from alignment at sc0000210_pilon:350153..352814+ (Clytia hemisphaerica_ch_hm2_pilon)
agCTACAACAAAGAAAAGACCGGATTCAAAGAAACAGATAACACCTTTGA AAAGTAAAGATGCAGgtaggaaaaatctttaaaaaatccgtaaattcatt cattttaatgaaagtaTTTGATTCTAACACTCGACAAAATTAGTTTCTCA ACAACACATCTATAATAATACTTCAAATCTTGATAAAAGGCCGAAGTTTG TACGGATGATTGATTAGGCTCTTGAAAAGTCATTTTTAGGAACATGTGGA TTGGAAAATAATTCctttattaaatttgatattaAGATCAGAATTagctt aaattttgatgaaagtTGAGATATAAAACAAGCCTTGGAAAGTTTCCTAT ACACAGTCTACACAGGTTCAAGTTGTTTTGATGGCGCCTTTCCCTGGGTC AATCCATGTCATGTGAGGGAATTGGATACCATAACTCAGATTCAAaagta tgggtagatattccagacattgtggtgtgctgaGCACttaggaggttcta cacctgcgaggacatccgtcctcccgtgtagttcgagtgtcatggtatac gtcATGGCTCTGCAGCTTGCATCagcagggttgcaatgtctgcttgcgct gtgattcttACTTAATGGGTAGGACtcattccgatgcatcggaagaccta tctatctatctatctaaacaaaatcgacaattttaaaatttttgaattag tGAAACTTGAAAATCTTTATTCTTTTATAAAGCTTACGACTTGGATGATC CATTGGGAGGATTGCTTTCAGATGAAGAATCAActccaatcaaaacaaca ccTCCAAAGAAATCACTTTCCAGGAGGATATCCAGTGATCGATTGAAAGT TGAACCATCTTTCGCTTCAAAGGATAATGACAAAAACCATGGTACAGAAA GAAAGAGTATATTTCTTTTAATAGTCGTGTAGAAAAGCCTCTTAGGGTGT ACCTTTCAAaagattgggctattccagaaaaaattgtacccctatgttga ggagatcttttttccaatttttcaggacccccttggatttttttctccca tttctttggaccaccctggattttcaacctgattttactgaccaccctgg atcttattattaaaaaaacaaggtcaccctggattttttatttcccagac caccctggattttttattttccaggccACCCTGGACGTCTCCTCAACAca ggggtacagactatttctggaataccCCATTGGCCGATAGTctaatattt gaaaatggagAACACTATTCGATTCAGCTTTTTTAGATTCGGAAGCAGTA TGTAGGTTAGTTAGAAGAATTAAGATAGAATAATCAGACTTGTTCGGTTA GAAAAGATGTCAAACGCTCTAAAATGTTGAATAACTTAGGCATTAAAACT CTCAGTATGGTATAGGTTATTTTGACTGAAACCAGCCTATAAGGCTTTAT GATAATCTTACAAAAGCAATGCAAAATAGTTAGTTGATCCAACAATATAT TGTTTCAATTATATTCTAAACTTTTAACATCGAATCGTTCTAAATAAtgt cttttatgttttgatgattcgtTTAAAAAGTTACCTGCAATATTTCTGCA AGCTATAAGCATTTTTCAATGCGTTACAGACGTCAACAAAGTTGCAAAAG GTTTCTTCTACCATAGACTTGGATCCAAGCAATGACCCATTTCTTTCTTC TGACGCCAAAGAAGGGAGACCGACATTGAGTCGTGGTCGTCAAAGTAGTT TCGACGAGTTCACAGCTAGTGAAAGTGAAAATGCATCTCCAAGGCAACCA GTCAACACAACAAATAAAAATCGTAAAGGAAGAGGACGAAATAGGAAAGG TTCAATTGAACCGACTATCCCTGAAAGCGACGAACCAAAAACAGCTAGTA AGCCTTTAGCATATCCTCCTTTTCTGAAATAACCTGAATAAGGGGTGCCA TGGATTTCCGATATCCAGGAAACAGCTAAAATTGctaaagctaaggctac actgataaTTTTTTCcggcggctgcaatgcaatttGCTTCGCGTTGCAAG TGCGCGAGAAATTGCAAAGTGTGACACGTTAGTTTTTTCTATAATCGCTC TAagattctgaatttttttttcatggtgTCCTCAAGCGTCTGGTATTCCG ATCTTATTAAGTGATTCGAACGTCGGACgatcaaacaaaaatattcgaat GCAACAGTTGCATTGTAGCCGCctgaaaaaatcatcaatgtAGCCTTAGC TTAAACCTAAAACAATAATCCTAAAATCGACAACAAATTGATATTCTCAA CACCCTTCCAAATATTCTGCAAAAGCCCAtttttttGCCACTTATTCTCG CACTCAAAAACTGAAATGGagtttttatttcacttttcaTCTACAGGCTT TTTCTCAAGAATAGTGTTTTCCATTTCCATATTCTTTCCATATTCTTTCG AGGAAAATCAATATTCTTAAAGGTAGGTTatgatccaaattcaacctaAC TTTAACATGTAATACATACAATCAAAAACatagtatttttttgaaattct ttagcattactgaaaaacaaatatattttactttttcgttTAGAAAAGCC GGCACCGAAGAAGAAGAACGAAGATGATGATATGTTTGGTGATAGTGATG GATTACCGGGtt

Coding sequence (CDS) from alignment at sc0000210_pilon:350153..352814+

>MSTRG.18945.3.p1 ID=MSTRG.18945.3.p1|Name=MSTRG.18945.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1089bp|location=Sequence derived from alignment at sc0000210_pilon:350153..352814+ (Clytia hemisphaerica_ch_hm2_pilon)
gCTACAACAAAGAAAAGACCGGATTCAAAGAAACAGATAACACCTTTGAA
AAGTAAAGATGCAGACTTGGATCCAAGCAATGACCCATTTCTTTCTTCTG
ACGCCAAAGAAGGGAGACCGACATTGAGTCGTGGTCGTCAAAGTAGTTTC
GACGAGTTCACAGCTAGTGAAAGTGAAAATGCATCTCCAAGGCAACCAGT
CAACACAACAAATAAAAATCGTAAAGGAAGAGGACGAAATAGGAAAGGTT
CAATTGAACCGACTATCCCTGAAAGCGACGAACCAAAAACAGCTAAAAAG
CCGGCACCGAAGAAGAAGAACGAAGATGATGATATGTTTGGTGATAGTGA
TGGATTACCGGGtgCTACAACAAAGAAAAGACCGGATTCAAAGAAACAGA
TAACACCTTTGAAAAGTAAAGATGCAGACTTGGATCCAAGCAATGACCCA
TTTCTTTCTTCTGACGCCAAAGAAGGGAGACCGACATTGAGTCGTGGTCG
TCAAAGTAGTTTCGACGAGTTCACAGCTAGTGAAAGTGAAAATGCATCTC
CAAGGCAACCAGTCAACACAACAAATAAAAATCGTAAAGGAAGAGGACGA
AATAGGAAAGGTTCAATTGAACCGACTATCCCTGAAAGCGACGAACCAAA
AACAGCTAAAAAGCCGGCACCGAAGAAGAAGAACGAAGATGATGATATGT
TTGGTGATAGTGATGGATTACCGGGtgCTACAACAAAGAAAAGACCGGAT
TCAAAGAAACAGATAACACCTTTGAAAAGTAAAGATGCAGACTTGGATCC
AAGCAATGACCCATTTCTTTCTTCTGACGCCAAAGAAGGGAGACCGACAT
TGAGTCGTGGTCGTCAAAGTAGTTTCGACGAGTTCACAGCTAGTGAAAGT
GAAAATGCATCTCCAAGGCAACCAGTCAACACAACAAATAAAAATCGTAA
AGGAAGAGGACGAAATAGGAAAGGTTCAATTGAACCGACTATCCCTGAAA
GCGACGAACCAAAAACAGCTAAAAAGCCGGCACCGAAGAAGAAGAACGAA
GATGATGATATGTTTGGTGATAGTGATGGATTACCGGGt
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.18945MSTRG.18945Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18945.3.p1.exon1MSTRG.18945.3.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18945.3.p1.exon2MSTRG.18945.3.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.18945.3.p1.exon3MSTRG.18945.3.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.18945.3.p1MSTRG.18945.3.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000210_pilongenomesc0000210_pilon:350153..352814 +