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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:662067..668977+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17753.1.p1 ID=MSTRG.17753.1.p1|Name=MSTRG.17753.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6911bp|location=Sequence derived from alignment at sc0000182_pilon:662067..668977+ (Clytia hemisphaerica_ch_hm2_pilon)
AGATGAAGTGTTTATAATAAAGAAAGATATGAATTCTGCAGCTCTTAATG
TTAACCCTTTCATGTAAGTACATTTTTTACTAATCATTACCGTCCTTTTG
TATAACATTCTAATTTCCTAAGATTCTTTTCAGTTTCAGATTTGTTTTTT
cggaatctttccgctattttccCCGGAATAACCGGAAGGAGATTGGAAAG
gttttgtttctaaaggtacggaaaatcttgtttttACTCACGGAAATGCC
TAACTTTGCCGAAGCTATTTTTTCTACAACACCCACTACGTCCTTGTCTA
TTTTCGCTAGACATGGCTGGAACCCTCCTGTGCCTAGGGGGAACTAACCA
TGTTTAGGGgtcaccaaaattttttttagatgaaCCTTGGGTGCTAGATT
CTATGTtaggtgatttttttctgaacttgtttttgtttcatcGTAAACTT
CAATATGGAATGTCTTCTGTCTAAAAAATTGTGTGTATGAGTAAAGTGGG
TGTGCGCTGAGctattttaaaaaattgtgCAATAGCACGTCTTCatactt
tttttctaatttgcagcttgttcgaaacgcaggtcacaggtcggaGGTCA
TAACACAagtcacaggtcatacaaactacGGACCGGAAAATGTAATACAC
TTGTAACATACAATTTACAACATTGAAATTATTATATGCAATGGAAATGT
TGTATACGGAATATGCTATTTAGATCAACATCAAAATATAGATCAACCCC
AAAATAATGACGTCAGAAAATATGAGGTGTGTACACCAATGTACAATAAA
ATGTCTTATGCCCAATAGAATGCTGACggtgcaagtggatatagattaaC
ATGTTTTGCTCCAAGAAAGCTGTTTAGAGACACGAAAATAGGcgtcattt
ttatcaaaaatacaaagaacgGGATAAAAATAGTCAaccattttaaaaat
ataatccTTTTGgattataaattcataaattcttgaaaggtgatgcagga
gatataatAGGAAATGATAAAGCGATTGTGTAATAGGTATTTTTCTGTCA
GCATCGATGCTGCCAGGGGGCTCTGTTTAAAGGTGAcattaataaaatca
ataaaaatatcacagtacagtatgtggcccccaaaacggcgatcaaattt
gaaatttctctcaaatctagaggaaaagagattttacaaatatttttgct
gcatgaaaacctttaacatctctactttatttcctggaagttctttttca
aaattttcaatttcaacaatatttttcaatcgaaaaatatgtagcttttt
tctaatggcccccaaaacggaggtttgaaattttagcgatttctcgagat
atctttaagatatgaatacaaattttgaccatagttttgaaatatgattt
agagggttttgggcataaattcatttgataaagttttttacagtataccc
ctggttgtcaaaatgcaggtttggggcccccaaaacggaggtgtagttaa
aatcaaattattaagcccagtggtaatagggggagaaactatgaacatat
ttgtgttctcccttaaatttacgacccgatggatgtaaaatttatgattt
ttatgaaatatttcaagattttcgatattgcaaagtccaaactgaaaatt
tagaaatcttcaaaatgacaattttgatttaacaacgtcttaataatctt
aaaacaaatctcttttgaaaatagttccattcatgtatggaataagctgt
gaaagcttaactgaaactgaaaatataaagctttaaaggtatttttctcc
tatattttgcaaaaaaaagacagaatttgccgtttttgctgattcagcga
aaagttttatatataatgccaattttttaatagaattccaagattttttg
atttttctcatatttagaattttcggttttgtcaatgctgattctaggga
tCCAAAATACtagttgaccttcaagatgctatatcttttacccaacCTCT
AAAGCTACAGATGTAtgtgcattttctgaacggcattaggtgtagaaagt
ttcctataccccgttttcataacttattttcaacatccaaggagctagag
tgagttatatgcaatttttatctaattttggtgttaaaatattttcttta
gacgcaaatatgttattttgaatccgtctcaaaccagcaaaaaaaacatg
ctcatttttaagtataaccatattctttcaaaataaacaaaaatcgttta
attctgataaatctacaagtcagaatcttcattttaatcacgacctccgt
tttgggggccgtctccatTTTGCCCCTATTGTatggaaaaatctcggaac
tcgtaaaatatttctcatattgtactcgcaactatccgataactattaca
tatctATTACCCTttttggctgaccttccagcgcagctggtttattcgcT
ATCGAAAAAGATTGATCGTTCGCTATCGAAAATTTCCTTTATTGCTATCG
ATTTCTTTTCTCGTAAATGTTGATTTTACGTTCGTATTGAATGAATTTTG
ACGTTTTGGACGAAGGGAAAATAGTGTATTTAGTATTGTTAAATTATGCC
ATGCTGGGACTGACTCCGTGCAAGTAAAATAGAAATAAGGGAAATACCTA
AGTTGTTTTGGAAGCTCAAGAAAAGGCTCAAGAAAAGAACTTCGAGGAGA
TAAATCTCGGAAAGCCTCGCCTCAAAATAcgtttttatttaaagtttttt
gaaagcgaAAATAgctctaaataaaaaaatttcgaggGTATAGATCCGTT
GCACAGCAAGCTTCGCCCTATACGGATTTAAAACTAACGCGCAATTTGTA
TGTATAGCACCAGTTATGATATTTAGACGGAGGGATATAGTTAGTTGTTT
TGAAAGCTCAGCAAACAAACTTCGAGGTGATAAATCTCGGAAAACCTCGT
CCAATACAGATTTTACAGACAAAATGTTTTGCTTCTTTATATCACCAATC
AATGTTTTTAGAATCAATTCATTTCCTTGTGGTATTCaagatttatcttt
ttttgtttctaatCCTTTTTACTTACTGAGTTCAGTGGTCAAAATAAGCT
TTTTCGTTGTGATCGattattttagcgaatcgctCGTGTTTAGTGTCACC
CGAAGGCCGACCAAAGTTTGGGCTTTAGGAACaggaaattttgaacattt
ACCCTTCTTTTTACGAATTATGCCTTTAAGATGTTTAAATTAGTTGGGTA
TAAATACTAAAACATGAAAATTGTAGATAGAAAATGATTGTTCCAAAAGA
TAACTGCGCCAAAATTAACCAAACAGTGTATGATTAATAAAGATCACTCA
AAAATTGATCGGTCATTTCTTTGAATCCGAAATTTAGCTTAAGCATACAA
ATTGCGATTGCTGCGCTTTTTCCGATGAAAATTTTCGAAcgtgaaaaaac
aaatttttggatAGCGAATAATCAATCTTTTCGATagcgaaaaataattt
ttttcgatagcaaaaattcaatcttttcgatagcgaaaaataaaactttt
cgaTAGCTAAGATCAAACTTTTCGATAGCGAAGATCAAACTTTTCGATAG
CGAAGATCAAACTTTTCGATAgcgaattttcaagttttaaataTGCGAAA
AAGACGTTTTCCGATAGCGATTGTCCTTATTCTGATTGCGAAACTTTCAT
GGTTTTGCAACATAGGGCGCGTCATAGTCTTCACTATAGATgtaaacagt
ttgaaaaaaaatatctttaatgaaacacaaagaattttcgaaaagattta
agggctctgaccatagtgaatttttcataattgctgtgtttaaaatgtgt
ttactgactgatgtaaccaacaaaactatggcatgttatacattttctgt
tagacaaactattcctgaatctgaaaattctaaaattgcattgaaaaaat
ttgatgaagaagaaaatgaagacttttgagAGGAAGAgtgtttcaacttt
gaaaagcttagtatcggcgaagaaaaaacattttgaaaaatttttcgcag
tagatggtgtatcttttaccgaacaattaaaatttttgcggaaaattttt
gtaaatgcttctttgtctcgaaatcttcaaaatagtggtttttcatcaat
ttttcatctggattttgcttaaaaaacagtcataacttttgacacatctt
tttagaaaaattttccgcaaaatttaaaaatagtttaattctttgcagac
agtgtaaagaaattttgaaacaaaaaagttaattacccattaaaactaag
cactttttgtaaaagagggtgaagCAACATaatattaacatctttttaaa
gttcataacgtcatttttgcaattaaattcttaattactcttaagggatt
cgattaaaaagcaatttataaaggcaattctttgttaaaagtgttaagga
acctgaaatataacttttatgttcaaataccaaaatcaatttttggacta
tggtcagagcccttaatgtgtcattggcttaggggtcacccaaaatattt
ggcaaccaggggtcacctgaattcttaggggggcacctaaaacctgctgc
caagccatgtaAAAAAGAGGCAAAGGAATTTCAGTGTGGAAAAAGgagtc
ttataaaaaacgacggtGATGATAAAAGAGAGAAAGATTTCGTTATCCTA
TGATGTAGGGGAATTCACTGTGTTTACGTGACTCTGTCAACTCGTGCTTG
CGGTACAAAAACTGCTGATGTATATAGTAACTATACCCAAACGACTCGGG
AGAACAATGCAACCTCGTACTGTCGAACCTGACAAGTATTCACTACACgg
ggggggtgaccttgacggccgatgGGGACGTGGCTGGAGTTTGAAAGGTG
GGCCCTGttagatatgaatttttggtaaatttaggACCCTATCAGAACGA
AAGAAATGATGCCATTTTCACACtgaaaagttgcaaaaatgcctaaaagt
agacgaaaattaaaaattcttttaactTCTATCCCGAAAATTGTCCGAAA
TAACTGGAAATAACCAAAAGTAGACCCTGCCTGTGAGAtgcacatcttga
aaattagtaaattagggaccctgtcagatatcttcagagcctaaaataGA
GACCCCGTCGTagccaattttgcctaagtgacCATCCATCCCCTCTGGCA
ACAACACCACAGATTCAGACATTTCTTCCCACACCTTCCTAAACTTTTTA
ATTCCTTCTAGGTCTGGAGATGTAACGGTTCGAAGTTGTCTAAATTTATA
TCTTGTAGGAATGAAATCCAAAACTTGACACCTCAAGCGATCGATCCTGA
GAAATGCACCAAAGACCTTTCTCTGTATGAACAAATCCACAAACATTCAC
ATACAGTTCAAGAACGTCAAACCAAACAATTTGATCTTGGAAATGGAATG
ACATTCAGAACTCCTATCGAAGCTGCGGAGTATCTTCTGTTAAGAGAATA
TGGCGAAAGCTTTCTTTTCGAAAACGATTGCCATGAACGAATACTCATAC
CACCAGAATTCACATCAAATCAATATTTCAAGAAATCAAGCGCAGTGATC
TTAGACTATGACATTAAGGGCGAAATGTTAAAAGTACTGAAGAACCTCAA
GAAACAATCACCCAATCATTGGTTCACTAAGGAGCTGGAAACCTTTGTCG
AATCGCAGCAATTACATAGTAACTCGTTTGATAATATAATACCACCGAAG
GAAATCGATCAAAATTCATTCGTTAAATGGAAATGGAATATCAAAGTCAT
GCATCTGATGATCCAATTTGCCAAAGCTGAAAACCTGAATCTACCATCAT
CAATCTTGGAACCAGATGATTTTACCCAAGGTTGTATTGACCAGATTGAT
ACATTACCACCAAGTGCAAAAAGACCAGATAGGTTGCAAGATCTAAAAAT
CATCCTCAGTACTTACAAATGGTCCAGAGCTTCGGCAAAACGAAAAATCA
ATAAGCTCATAACTGAAAACCCATTTCCAAACGTTTCAATCAAATGGATC
ATGGACTTGGAATTATCAGATACAGGAGAAAAAACCGAACATTGGTTCTT
TGAACAACTTTCTTCGAACGCAGCAGCAAACATTCTGGAAGACGCAGTCA
TACTCCAATCAGTGACTTTCATGACCAATGTTTCAAACAAGAAACACCAA
GAATTCGACTTCATCATCATCTTTTGGAAACGGAAACTGATCCTGGGAGT
AGAAATCAAACGACAATTGACAGACACCAAAGCTTTCGACCAACTTGAGA
AGTACCATAAACTATTCGAGGAAAAGTTAGGAGACCAGCTTGGACATGGA
TGGATATTCTTCCCGACAATCTGTGTTGAATATGCCAACGGATTAGGGGA
GACTCAGCATTTCATCAACAAAAACACTGACATTCCCATATGGCTATCAG
GACTCCTAAGCAGTTTCCCCATAACACCATACCAAATTCCGTTTATTCAC
CCATTGGAACAACTCAAAAAGGTTCTTCAGATCATTGTGTTCACTATACA
CATCGCCAAGAAAGATCTCCCAAGACCGATAACGTCATCTAACTGGGTAG
ACTACATTAACAACGTAATGGATACTTTGTACACGGTAGATAATATTGTT
TTCTACTCCAAAAGTCAACTACCCATAATGACAACGGACCATTCTCGata
caaaaaacttttcataaGAGGTGGATACAGTACAGGCAAGTCGTTCTTGA
TGCAAGAGAAAGCCAAGATGTTGAGCAAAGATGACAGGTACAAAGGGAAA
ATCATCTACATTTTAAAAGGAAGAACAGATCATGACCCAGACCAACTTCT
TTATCACAAACTGAAGTTGGAACTCCCAAATGTAAAATGTACTACAAATG
TAAGATTTTTA Coding sequence (CDS) from alignment at sc0000182_pilon:662067..668977+ >MSTRG.17753.1.p1 ID=MSTRG.17753.1.p1|Name=MSTRG.17753.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3330bp|location=Sequence derived from alignment at sc0000182_pilon:662067..668977+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGAAGTGTTTATAATAAAGAAAGATATGAATTCTGCAGCTCTTAATGT
TAACCCTTTCATGAATGAAATCCAAAACTTGACACCTCAAGCGATCGATC
CTGAGAAATGCACCAAAGACCTTTCTCTGTATGAACAAATCCACAAACAT
TCACATACAGTTCAAGAACGTCAAACCAAACAATTTGATCTTGGAAATGG
AATGACATTCAGAACTCCTATCGAAGCTGCGGAGTATCTTCTGTTAAGAG
AATATGGCGAAAGCTTTCTTTTCGAAAACGATTGCCATGAACGAATACTC
ATACCACCAGAATTCACATCAAATCAATATTTCAAGAAATCAAGCGCAGT
GATCTTAGACTATGACATTAAGGGCGAAATGTTAAAAGTACTGAAGAACC
TCAAGAAACAATCACCCAATCATTGGTTCACTAAGGAGCTGGAAACCTTT
GTCGAATCGCAGCAATTACATAGTAACTCGTTTGATAATATAATACCACC
GAAGGAAATCGATCAAAATTCATTCGTTAAATGGAAATGGAATATCAAAG
TCATGCATCTGATGATCCAATTTGCCAAAGCTGAAAACCTGAATCTACCA
TCATCAATCTTGGAACCAGATGATTTTACCCAAGGTTGTATTGACCAGAT
TGATACATTACCACCAAGTGCAAAAAGACCAGATAGGTTGCAAGATCTAA
AAATCATCCTCAGTACTTACAAATGGTCCAGAGCTTCGGCAAAACGAAAA
ATCAATAAGCTCATAACTGAAAACCCATTTCCAAACGTTTCAATCAAATG
GATCATGGACTTGGAATTATCAGATACAGGAGAAAAAACCGAACATTGGT
TCTTTGAACAACTTTCTTCGAACGCAGCAGCAAACATTCTGGAAGACGCA
GTCATACTCCAATCAGTGACTTTCATGACCAATGTTTCAAACAAGAAACA
CCAAGAATTCGACTTCATCATCATCTTTTGGAAACGGAAACTGATCCTGG
GAGTAGAAATCAAACGACAATTGACAGACACCAAAGCTTTCGACCAACTT
GAGAAGTACCATAAACTATTCGAGGAAAAGTTAGGAGACCAGCTTGGACA
TGGATGGATATTCTTCCCGACAATCTGTGTTGAATATGCCAACGGATTAG
GGGAGACTCAGCATTTCATCAACAAAAACACTGACATTCCCATATGGCTA
TCAGGACTCCTAAGCAGTTTCCCCATAACACCATACCAAATTCCGTTTAT
TCACCCATTGGAACAACTCAAAAAGGTTCTTCAGATCATTGTGTTCACTA
TACACATCGCCAAGAAAGATCTCCCAAGACCGATAACGTCATCTAACTGG
GTAGACTACATTAACAACGTAATGGATACTTTGTACACGGTAGATAATAT
TGTTTTCTACTCCAAAAGTCAACTACCCATAATGACAACGGACCATTCTC
GatacaaaaaacttttcataaGAGGTGGATACAGTACAGGCAAGTCGTTC
TTGATGCAAGAGAAAGCCAAGATGTTGAGCAAAGATGACAGGTACAAAGG
GAAAATCATCTACATTTTAAAAGGAAGAACAGATCATGACCCAGACCAAC
TTCTTTATCACAAACTGAAGTTGGAACTCCCAAATGTAAAATGTACTACA
AATGTAAGATTTTTAGATGAAGTGTTTATAATAAAGAAAGATATGAATTC
TGCAGCTCTTAATGTTAACCCTTTCATGAATGAAATCCAAAACTTGACAC
CTCAAGCGATCGATCCTGAGAAATGCACCAAAGACCTTTCTCTGTATGAA
CAAATCCACAAACATTCACATACAGTTCAAGAACGTCAAACCAAACAATT
TGATCTTGGAAATGGAATGACATTCAGAACTCCTATCGAAGCTGCGGAGT
ATCTTCTGTTAAGAGAATATGGCGAAAGCTTTCTTTTCGAAAACGATTGC
CATGAACGAATACTCATACCACCAGAATTCACATCAAATCAATATTTCAA
GAAATCAAGCGCAGTGATCTTAGACTATGACATTAAGGGCGAAATGTTAA
AAGTACTGAAGAACCTCAAGAAACAATCACCCAATCATTGGTTCACTAAG
GAGCTGGAAACCTTTGTCGAATCGCAGCAATTACATAGTAACTCGTTTGA
TAATATAATACCACCGAAGGAAATCGATCAAAATTCATTCGTTAAATGGA
AATGGAATATCAAAGTCATGCATCTGATGATCCAATTTGCCAAAGCTGAA
AACCTGAATCTACCATCATCAATCTTGGAACCAGATGATTTTACCCAAGG
TTGTATTGACCAGATTGATACATTACCACCAAGTGCAAAAAGACCAGATA
GGTTGCAAGATCTAAAAATCATCCTCAGTACTTACAAATGGTCCAGAGCT
TCGGCAAAACGAAAAATCAATAAGCTCATAACTGAAAACCCATTTCCAAA
CGTTTCAATCAAATGGATCATGGACTTGGAATTATCAGATACAGGAGAAA
AAACCGAACATTGGTTCTTTGAACAACTTTCTTCGAACGCAGCAGCAAAC
ATTCTGGAAGACGCAGTCATACTCCAATCAGTGACTTTCATGACCAATGT
TTCAAACAAGAAACACCAAGAATTCGACTTCATCATCATCTTTTGGAAAC
GGAAACTGATCCTGGGAGTAGAAATCAAACGACAATTGACAGACACCAAA
GCTTTCGACCAACTTGAGAAGTACCATAAACTATTCGAGGAAAAGTTAGG
AGACCAGCTTGGACATGGATGGATATTCTTCCCGACAATCTGTGTTGAAT
ATGCCAACGGATTAGGGGAGACTCAGCATTTCATCAACAAAAACACTGAC
ATTCCCATATGGCTATCAGGACTCCTAAGCAGTTTCCCCATAACACCATA
CCAAATTCCGTTTATTCACCCATTGGAACAACTCAAAAAGGTTCTTCAGA
TCATTGTGTTCACTATACACATCGCCAAGAAAGATCTCCCAAGACCGATA
ACGTCATCTAACTGGGTAGACTACATTAACAACGTAATGGATACTTTGTA
CACGGTAGATAATATTGTTTTCTACTCCAAAAGTCAACTACCCATAATGA
CAACGGACCATTCTCGatacaaaaaacttttcataaGAGGTGGATACAGT
ACAGGCAAGTCGTTCTTGATGCAAGAGAAAGCCAAGATGTTGAGCAAAGA
TGACAGGTACAAAGGGAAAATCATCTACATTTTAAAAGGAAGAACAGATC
ATGACCCAGACCAACTTCTTTATCACAAACTGAAGTTGGAACTCCCAAAT
GTAAAATGTACTACAAATGTAAGATTTTTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:662067..668977 + |
|
