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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:654180..657600- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17752.2.p1 ID=MSTRG.17752.2.p1|Name=MSTRG.17752.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3421bp|location=Sequence derived from alignment at sc0000182_pilon:654180..657600- (Clytia hemisphaerica_ch_hm2_pilon)
GTAACCTCACTTTTGAAAGAATAAAATCTTTTCCATACTAAGAAACATTC
TGCTATTATTGTTATAGACAAGATTCTCTTGGGTTTTTTATTCTAGCGCC
TCTTCTGCTTAGCTTGCATATATATGGTGCATATGGAAATCCTTGAATTT
TACTGAAGGCGACATTACGTCAAGGTTACCTCACTTTTTCCCTGATAAAA
ATTATTATTTTCGTTTTGGTGTCATACACTTGTATACTCAAGTGTATACT
ACACATTTTTTTTTAGAATACCTAAAATTTGGCTGAGCCTGGATTTGCTG
ATTTTTTTAGCAATTTTCAGCCTAAAATGCTCTTAAATGCGTTCCTAATT
TTTCAGACTACTTTAAATCGACAATATCATGCAAAATAAAGAGCACTTAA
AATTGGTAAAATTTGGACAATATTCGACTCTCGATTTTTGAAAATCCATG
ACTAAGTTTGGTTAAAACTGCTTTAAAAGAGGATAAAATTGTAGTTTCTT
GTCATTTTTTGAGAAAATTGAGGCTGGGCATGTTCTTACGATGTTGTTAA
TTTTTCGACGAATTTCAGCCTCAATGTTCTTATAAACTGGGTTCTAATAA
AAAAAACGTGTAGTGTATTTATTCTATCGCTGTTACAATATCTCTGAGTA
TATTTACGAACCCCTAACTATTTTATTTCGAACTCGTTATCATTACGCAT
CTAGTGCCATCTAGTGAATTGGCTTGTGAAACACTTTCTCATTTTCTGGA
ACTAGAAAGCTTTGCCTCAACAGATACTTCTAATTGCCTATTTAAATAAT
TGGCATTGCTAATTAACAATGATGATTGACCATAGTCATTATGAAAAACC
CCGGTCTGGCAATGTATTGTTTTAGCTTTTTGTTCAATTTTCTTTTGTTA
CAAAGCAAAGACATACTTTTTTATCACGTTACCAAAATCTCCTCTTGGGA
TTGGTCTATTTCCTAATCACATGATCAAACGGTTTGCAAAATAAATCGAT
TTTGGTACGTAAGCTACATCTTTAAATAATAAAAGGAGACAAAAGCTTTC
CAGACCAGTGTTTTTATAATAACTATTGATTGACCGTGATTAACACTAGA
CTCTCTAGGACAGCTGTCTTCTGTCTCTTAGTCCCCTAGTTATCTATTCA
TTTTTTTCCCAGTGACAGTCCTCAACCAGAACAAAAGGAGCAACACACCG
GAGATTCAAATGCTGTTAATGCAGTCATGGAGTTGACGCAATCTCAAATC
ACACAAGAACAAACACAATTGGTCAATGTAAGTGATTTATATTAACTTTA
CAAAAACAGCTGTTGGCAATGGAAATGATATACGAGTTTGAGTTTTATAT
CAATTTCAGTACATAGAAAACTTCAAACTGAAAGGAACTTAGAAGATAGA
TTGAGTAAAGTTGAGTAAAGTTAACTCAACTTATTTTGAACTTATTCACG
GCGACTATAATTTTGCTCGACTTTTTTACTTTGAATGTGTACACGTTTTT
TTTTTTTTTAAGAAACACACTTTTAAGAAACATGAGGCTCAGAATGCCTA
AAAACTAAGAAACATCTAAGAAACATGCTGAGGCTGAAAATTAAAAAAAT
GACATTTTTAATTCGTTTTTTTAAGAACCTTCCAATCAAAACATAAAAAA
TAGGCTGATTACGTCAAAAAGTTTAGAAACATGTAAGAAACATTTAAGGC
TCAAAAGGCTGATTTCTTTAGAAACATTGAGGCTGCTTGGTAAAACTAGT
TTCTTAAAAAAAAAAAACGTGTACGTACTTCCATATTGTCTTTGATATTG
TGGAAGGTTTAAGAATATATAGGCTTTGAAGACTCTCCCTTTTGCATCGA
TCGTTTCTTCCCAATACCAACCTGAAAGACTGATCAACCCCCGTTAGAAA
ATTTATTACTCTTAGGTTTCAAATAAACGGGGGGTGGGGTTCGAATAAAC
GGGGGGTGGGGTGGAAAGTTTTCGAAATTTTAATAAACGGAGGGGGCTAA
TTGCCGGGGGGGGTTGGAAACTGTACTTGCAAAAATTCAACAATAAGGTA
AATATAGGCTAAAATCAGGCTATTTAAAGCAGAATAAGGGACCTTCTCTT
TGAAAGCTGAAAAAATTCTTAAAAATGAATAAACGGGGGGTCCTATTAAG
TTCTGGGGGGGGGGTTTGAAAAATTTCTAAAAATTAACAAGTTGACATTT
TTTTTCAAGGAGCCAACCAGTGAGCAAATGGATGTAGACCAAGAAAACAA
AATGACTGTTGTCGATATAGCTGCTATGTCAACCGAACCCGAAAACGAAT
CCGATTCTACATCAAAACTGGAAAAAGAATCCGAATTACCCGTCAACAGT
GAAGAATTTGATGTCCTCAAAGCGTTAGCTGATAAATTAGGAGCTGTTAT
TACTTTGTTCACCGATTTAGACCATTGTTGGGTGATCCCGATTTTCCCCG
ATAAATTCCATTTAAATTCACCTCATTTCTTTGTTGTGTATCGATTCCAA
AGATTTTTTGCCGCTTGGCTCGGCAGCAAGGCCTCTGTGTCATCTATTCG
TAGCATCAACTTCAAAAGACAAGGCAAAGAACCTCAATGTAGGTGTGGTC
GTGGTACACCGGGTAAAACGAACCAAGGACGTTGCGTTTCAAGAGAAAAC
GGGAAATATTTAACCCGATGTATCTGTTTTCGATTAGATCGAGGTTGTAG
TGATAAATGCGATTGTCGGGGTTGTGATAACCCGTTTGGGAAACGAATGG
AAAGACCACGTATGAAGAAACCGAAAATTCCATACCGACAACGTTACGCC
CACGAGGCGGCTAAAATCGCAACGTGTAAAAGCTCCACCGTTTCAAACAC
TGTTGGTACTCAAACGCCCTCCGCCCAAGAGATTTTTGACTCCCAGGGTG
GGGGTATGGAAAGCTGGGTACCTATTGAACATTGTATTTTTGAAGCTCTC
ATCAACGAGATCAAATCGGAGGAGAATGTCATTACGCCAGATGAAGTTCA
ACTCATTTTCAATCAAGTTGTAAAAGAACTAACAACGATACCACGTCTTG
AACAAGCAGCTTTCATTAAAAGCACAGAACAAATTTCTTTGAAACTTCAA
CAAAGGGAGAAAGATGTATCCGATTATCTAAGGATATATCAAATGCAGGT
TGATCTTTCGTTAGGATAATCTAAAACCTGACTTTTGATTTACTGCATCT
TTTCTGCAGTTTTTAGGCTTCTTATGTTTACGTCAGCATCAATTCCATTT
CTAGGATTTTTTAATTCTTTATGTTTTTATGTGTTTTGCTTCTTATTTAT
TGTTTTGGCATACATTCTGTTCATAGCTTGTTTAACTGTTGTTTTTTGTT
GATTAGGTACCTTTAGCTTTCTGATTTAAAAAGGCGAATCTCAGTTCAAC
ATATTCATTGAATTTCCTGAA Coding sequence (CDS) from alignment at sc0000182_pilon:654180..657600- >MSTRG.17752.2.p1 ID=MSTRG.17752.2.p1|Name=MSTRG.17752.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2022bp|location=Sequence derived from alignment at sc0000182_pilon:654180..657600- (Clytia hemisphaerica_ch_hm2_pilon)
GAGCCAACCAGTGAGCAAATGGATGTAGACCAAGAAAACAAAATGACTGT
TGTCGATATAGCTGCTATGTCAACCGAACCCGAAAACGAATCCGATTCTA
CATCAAAACTGGAAAAAGAATCCGAATTACCCGTCAACAGTGAAGAATTT
GATGTCCTCAAAGCGTTAGCTGATAAATTAGGAGCTGTTATTACTTTGTT
CACCGATTTAGACCATTGTTGGGTGATCCCGATTTTCCCCGATAAATTCC
ATTTAAATTCACCTCATTTCTTTGTTGTGTATCGATTCCAAAGATTTTTT
GCCGCTTGGCTCGGCAGCAAGGCCTCTGTGTCATCTATTCGTAGCATCAA
CTTCAAAAGACAAGGCAAAGAACCTCAATGTAGGTGTGGTCGTGGTACAC
CGGGTAAAACGAACCAAGGACGTTGCGTTTCAAGAGAAAACGGGAAATAT
TTAACCCGATGTATCTGTTTTCGATTAGATCGAGGTTGTAGTGATAAATG
CGATTGTCGGGGTTGTGATAACCCGTTTGGGAAACGAATGGAAAGACCAC
GTATGAAGAAACCGAAAATTCCATACCGACAACGTTACGCCCACGAGGCG
GCTAAAATCGCAACGTGTAAAAGCTCCACCGTTTCAAACACTGTTGGTAC
TCAAACGCCCTCCGCCCAAGAGATTTTTGACTCCCAGGGTGGGGGTATGG
AAAGCTGGGTACCTATTGAACATTGTATTTTTGAAGCTCTCATCAACGAG
ATCAAATCGGAGGAGAATGTCATTACGCCAGATGAAGTTCAACTCATTTT
CAATCAAGTTGTAAAAGAACTAACAACGATACCACGTCTTGAACAAGCAG
CTTTCATTAAAAGCACAGAACAAATTTCTTTGAAACTTCAACAAAGGGAG
AAAGATGTATCCGATTATCTAAGGATATATCAAATGCAGGTTGATCTTTC
GTTAGGATAAATGGAGTTGACGCAATCTCAAATCACACAAGAACAAACAC
AATTGGTCAATGAGCCAACCAGTGAGCAAATGGATGTAGACCAAGAAAAC
AAAATGACTGTTGTCGATATAGCTGCTATGTCAACCGAACCCGAAAACGA
ATCCGATTCTACATCAAAACTGGAAAAAGAATCCGAATTACCCGTCAACA
GTGAAGAATTTGATGTCCTCAAAGCGTTAGCTGATAAATTAGGAGCTGTT
ATTACTTTGTTCACCGATTTAGACCATTGTTGGGTGATCCCGATTTTCCC
CGATAAATTCCATTTAAATTCACCTCATTTCTTTGTTGTGTATCGATTCC
AAAGATTTTTTGCCGCTTGGCTCGGCAGCAAGGCCTCTGTGTCATCTATT
CGTAGCATCAACTTCAAAAGACAAGGCAAAGAACCTCAATGTAGGTGTGG
TCGTGGTACACCGGGTAAAACGAACCAAGGACGTTGCGTTTCAAGAGAAA
ACGGGAAATATTTAACCCGATGTATCTGTTTTCGATTAGATCGAGGTTGT
AGTGATAAATGCGATTGTCGGGGTTGTGATAACCCGTTTGGGAAACGAAT
GGAAAGACCACGTATGAAGAAACCGAAAATTCCATACCGACAACGTTACG
CCCACGAGGCGGCTAAAATCGCAACGTGTAAAAGCTCCACCGTTTCAAAC
ACTGTTGGTACTCAAACGCCCTCCGCCCAAGAGATTTTTGACTCCCAGGG
TGGGGGTATGGAAAGCTGGGTACCTATTGAACATTGTATTTTTGAAGCTC
TCATCAACGAGATCAAATCGGAGGAGAATGTCATTACGCCAGATGAAGTT
CAACTCATTTTCAATCAAGTTGTAAAAGAACTAACAACGATACCACGTCT
TGAACAAGCAGCTTTCATTAAAAGCACAGAACAAATTTCTTTGAAACTTC
AACAAAGGGAGAAAGATGTATCCGATTATCTAAGGATATATCAAATGCAG
GTTGATCTTTCGTTAGGATAAATGGAGTTGACGCAATCTCAAATCACACA
AGAACAAACACAATTGGTCAAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:654180..657600 - |
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