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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:404142..408662- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17733.1.p1 ID=MSTRG.17733.1.p1|Name=MSTRG.17733.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4521bp|location=Sequence derived from alignment at sc0000182_pilon:404142..408662- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTTTTATTTGACGCTAGATTTCGACCAATCAAAAGCTTTCAAAATAA
AAACATTGGATGAGATGTTGAGTTCAGAAAATATTGAAAAAGCCGGTATA
CAGACACAGGAGTACATTTGTTGTCGAGATACTCGAGAAGACGCTAGAAG
TGTCTGAAGAAAATTTTTAAAGTATATTCTCGTTTAGAAATATACTGTAT
CATCACAATGCCTGGAAATTGTGAGCAGTTTAATACTTTGAGCTCTCTCA
GTTCAAAGTTTTCAGATTTAAAAGTTATTGCTGGTGGTGGCAGTGGAGTT
GTACTATCAGGAGTTGATAAATCACTTTCAGAAAGCTCGTTACCCGACAA
AGATGGATCACAAGTTGCATTAAAAAGACTTTCCTTGGTTGGCAAAGGAC
ATTGCCGTGTCGCCTTACGAGAACTACGTTTATTAAATCGATTCGTTCAC
GAAAATGTCGTAAAAACATACAAAATTACAGACTCAAACGGATCAACAAT
TGACGATCCAACCCTTGAAAATTTTAAAGATTTAGATTCTGTTTATGTTG
TTGAAGAATTACTCGATACAGACTTGCATAAAGTTATCGAAAGAAATGGA
AAACTTTCACTGGACACTACGAAATTGTTTTTATATCAACTTTTAAGAGG
ATTGAAATATATTCACTCTGCAAATGTTATCCACAGAGACATTAAACCAG
GAAATTTATTCGTAAACTTGGACGATTTAACTTTAAAAATTGGCGATTAC
GGACTTGCAAGAGTTTTTGATAATCGATACGAACACAAAGGATATTTAAC
TGCTGTTGTTTCTACGAGGTATTACAGAGCACCAGAAGTAATGAAAAATT
TGGGTGACTACAGCTATCCTATTGATATGTGGAGCTGTGGCTGTGTATTT
GCTGAAATGTTATCAGGAAAGATTTTGTTCTCTGGTGAAAATGACTTGGA
TCAACTCAATGTTATATGTTCAGCATATGGAGTTACACCCGACAATCTCC
TCACAGAAACTAGCTCCTTTCCTGAACATCTATTTGTTGGACTTCCTCCA
GAAGGTAATAAATTATTTTACTTTAGTTGATTTTAATTCATTGCACAATG
TGTGTAGCCGGTTTCAAATGCATTTATTATGGACATTTCGAAATTCTGAA
AATGTCGTGATTAAATTTTTAAACACAGCCATATTTTCTTTTCTCAACTT
TTTTCAGCGTTCATTCATTTTGTTTGTATAGCATTTCAATAAAATTTTGA
AAGTTATTGTTTCTCTGAACCCAAAAATATCTCATCCTCTGAATTTTTTA
AGAGTTTGTGCTGAATGTTTTATAAAAAGCTCATTCATGAAAAATCCATT
AATTTAGAAATCCAGATGAGTAAAAATAATTTTTTTCTAAATTTGAACTG
AAACATTTCTAAATCTCGTAAAAAGTTATACAAAATTTATCAATACGTAG
GTATTGATCCCCTCCTATGAAACTGTTTTTATTTGACACAGATCAAGATA
TGAAAAAATCTTTTTTCTCTCTTTCTCTCAAAAAAAAAATTGAGAAAAAT
TCTCTCGTCTGGTCAAGGTCCAGTTGAGAGGGTGATTCCCTGACTTTTAA
TTATTATCATCCTGTCGCGTTTTTTATCTTTCTTTGTTCCTTCAATGTTT
AAATTACAGAACAACCGAACAGAATCTAGAAAGGATATGAAATTATTAAA
AAACCAGCTGTTTAGGCTTATCAATGTTCGAGTTTTCTAGAAAAGAATAT
ACACCTGGAAATACATGAGAAAAAAAGGAAAAAAAAGAGAAAAATTTTCA
GCCTTCCGAAGATGGGATGAAAAAGAAAAAAAAAGTTTGATAAAGTAAAG
AAAAAATGTTTTCATTATACAAAAAGAAAAAATGATGAGAAAAGAAACCA
TGACTCAGACTTAGTAAGTGAAAACCACTGTTTTGGAGAGAGAGCTTAGT
CATAACTTTCATAACCTAGTTTCTAAGCCGCCTTTCTCACTCTATCTGTT
TGAGATGATATCAATATATCTTTATAGCTTAGAAGAAAAGCTTTAATTTC
CTTGACATCCGGCTACACAAATTCATACATTGTTGTTTGGTCAACTCAGT
AATTGAATCCTTTTCGAAAAAAAACGTTATTAACCCGTTAGTAATCCGTT
TTTGTTTAGAGACAAAAACAGATAAGGATTTTCACAAGCCCACCACCCAA
GACATAACATAAGAAATTTTAATAAAGCTGTTATATTTTGACTCATCATT
TTCTCATTTTTTTATCTTTACAGCAATCGATTTGCTCTCTCGAATGTTAT
GTCTCGACCCTGATGAACGAATTACAATTACTGAAGCATTACAACACCCC
TTCTTATCCGAATTACACGATCCAATCGATGAACCAATTTGCGAATACCC
GTTTCAAATCGAACACGAAATCGATAATCTACCCGTCAAAATCTTAAAAC
GTAAAATTCTTCGAAATTCCTGCGTCAGCTCTTACGAAAAGAAATCGTAC
CATTCGTCAGAGGAAAACCTTTTTAAAGACTTTGACGAGACCTTCTCATG
TTATTGTCCAACTGAATCAGTTAGCCGTAGGAACAGTAAAAATACACGCA
ATCGTTTGAGTGTCGTTACAAAGTTCAATTCACATGGTGAAGAGATGTGG
AGTTCGAACACAAATTCATCGGTCGAATCTCCTACTCATGATTATAAAAG
ATACCAAGAAGATCTCCCAAAAATTACATCTGAAAGCGAAGTCTTTTTAC
CATCCTTACAAGACGCGATGAGTTCTTGTCAAGTCCTGATCGACGAACCG
TTCCGTGATCCAGGAGTCTGTTCCCGTATGTACCACGAGGATGATTCGGC
TCCCGTGAAAAGCAACCAATTTTTATCCGCGGACACTTCAAACGACTTTT
CATATTTCTCAGACTTATCACCTGTGATTGATCTGAGTGAACCGTGTTAC
AATTTAAACGAAAAGAAGAAAGACTTGAATAATAATAATGGTAGCAATAA
CACCAAAGTTAGCAATAATAATAAAATGGAAACGGCTCCTTTTTTAGGGG
ACCATGGACGCTCCAGCGCCATCAGTATCGAAAGTAAAAAATCTCCGTCC
TTGAAAAAGGTACGTGAGACCACTGTTAAAAATGGTCACACTTCAACTTT
CACTGAAATTAAATTTGAAAGTTCAACACCGACAAACTGTAAAAGTATTG
ACGAATTACGGGATTTGAATAGTGAGATTTTGCGCACGCTCAATGAACGT
CACACGGCCTCGAAATGTAATTTTCAAGCCATGATTACGGACAGATTGTC
AAATTCCTCGAAACATTTTTCGCATTGGGATTCTTTGAAATTATGGATTT
GAGATTAATGGATGGATATGTTACTGCAGTGGCTTCATAAAATGATTTTT
TAGATAAATTTAGTACCTATTTTTGTTTGACCTTTTTTGGATTAAAATTT
TTTTAAATCGTTTAGTTTTTTCTGAAATTGTTTTTTTTATAAGAGAATTG
TTATATTGTACATGTACAGAGATGTTTGCTTATGTTTTTTTGTACAGAAA
TCTCTAGAATTACGTTCTCAGCTGAAATCTTAATTTAAATATATAAAAAA
TATCTATTTATTTATTATTTGTATCATATTGTATATCTTTTTTCCTTCGC
CCCAAAGTTTTGACAAATCTATGTAAATATAAACATTGATGAAATTTAAT
TTATACAAGATATGAAGAATAACAAAAAAATATTGAATTGTTATATTTTT
CAATGTTGACAACTTTTGATAATACTTTATCGCTTTGACCAAAGATTTTT
TTCTATATAGTTATTTTGCAGTTGTTTTTGTTTATCCTGCCTAGTTCTTT
TGTTTATTTTTTATGACTGTTTGATAACCTTTTCTTGTTTTCAGCAAAAA
TTTTAGCTACTAAGTGGGACCATATAGCCCACACCGAAATTCGTACAAAA
CTGTCAAAATGCACTGTTACAAAAATCTAATCCTTCAAAAATCACGATTT
CTAAGTCTCCTTATTTTTATTTTCTTTTGTGCCAAAGTCCAAAGTCCACA
TTATGTTTTTACAAAACATGTCCAAAACCGGTTAGCTTGAGATTGTACTT
TCAATATTGAATTACGCTATCAAAATACAACTGGGTCATTTAACCCAACC
TTTGCAATTTTTTCCTTCTACACTATGTCAAAGATTAAGGTTGTCAAACT
TAGAAACTTTTTTTTATTATATTTTAAAAACGTTTTGAACTTTAAAAAAA
GTATATTATAATAATTTATGAAACTACAAAAAAAGTTTGTTAGAACTTTG
AAACAGAATTTTATTAAATTATTACAGTACCTCTTTAAAATAATAATATT
TTATAAGTTTTCAAACTTTAGCAACAGAATTTTAATAATATCATAGGAGA
TAATGTTATAAGATACCTTTTTAGTGGAATTGAGATCTTTTTTCGGCAAA
TAAAATTTTATTAAATTGCCGCTGGTTATAAAATAATATTTAAAGGAAAG
AAAATAGTGAAAAAGTACAAA Coding sequence (CDS) from alignment at sc0000182_pilon:404142..408662- >MSTRG.17733.1.p1 ID=MSTRG.17733.1.p1|Name=MSTRG.17733.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3852bp|location=Sequence derived from alignment at sc0000182_pilon:404142..408662- (Clytia hemisphaerica_ch_hm2_pilon)
CAATCGATTTGCTCTCTCGAATGTTATGTCTCGACCCTGATGAACGAATT
ACAATTACTGAAGCATTACAACACCCCTTCTTATCCGAATTACACGATCC
AATCGATGAACCAATTTGCGAATACCCGTTTCAAATCGAACACGAAATCG
ATAATCTACCCGTCAAAATCTTAAAACGTAAAATTCTTCGAAATTCCTGC
GTCAGCTCTTACGAAAAGAAATCGTACCATTCGTCAGAGGAAAACCTTTT
TAAAGACTTTGACGAGACCTTCTCATGTTATTGTCCAACTGAATCAGTTA
GCCGTAGGAACAGTAAAAATACACGCAATCGTTTGAGTGTCGTTACAAAG
TTCAATTCACATGGTGAAGAGATGTGGAGTTCGAACACAAATTCATCGGT
CGAATCTCCTACTCATGATTATAAAAGATACCAAGAAGATCTCCCAAAAA
TTACATCTGAAAGCGAAGTCTTTTTACCATCCTTACAAGACGCGATGAGT
TCTTGTCAAGTCCTGATCGACGAACCGTTCCGTGATCCAGGAGTCTGTTC
CCGTATGTACCACGAGGATGATTCGGCTCCCGTGAAAAGCAACCAATTTT
TATCCGCGGACACTTCAAACGACTTTTCATATTTCTCAGACTTATCACCT
GTGATTGATCTGAGTGAACCGTGTTACAATTTAAACGAAAAGAAGAAAGA
CTTGAATAATAATAATGGTAGCAATAACACCAAAGTTAGCAATAATAATA
AAATGGAAACGGCTCCTTTTTTAGGGGACCATGGACGCTCCAGCGCCATC
AGTATCGAAAGTAAAAAATCTCCGTCCTTGAAAAAGGTACGTGAGACCAC
TGTTAAAAATGGTCACACTTCAACTTTCACTGAAATTAAATTTGAAAGTT
CAACACCGACAAACTGTAAAAGTATTGACGAATTACGGGATTTGAATAGT
GAGATTTTGCGCACGCTCAATGAACGTCACACGGCCTCGAAATGTAATTT
TCAAGCCATGATTACGGACAGATTGTCAAATTCCTCGAAACATTTTTCGC
ATTGGGATTCTTTGAAATTATGGATTTGAATGCCTGGAAATTGTGAGCAG
TTTAATACTTTGAGCTCTCTCAGTTCAAAGTTTTCAGATTTAAAAGTTAT
TGCTGGTGGTGGCAGTGGAGTTGTACTATCAGGAGTTGATAAATCACTTT
CAGAAAGCTCGTTACCCGACAAAGATGGATCACAAGTTGCATTAAAAAGA
CTTTCCTTGGTTGGCAAAGGACATTGCCGTGTCGCCTTACGAGAACTACG
TTTATTAAATCGATTCGTTCACGAAAATGTCGTAAAAACATACAAAATTA
CAGACTCAAACGGATCAACAATTGACGATCCAACCCTTGAAAATTTTAAA
GATTTAGATTCTGTTTATGTTGTTGAAGAATTACTCGATACAGACTTGCA
TAAAGTTATCGAAAGAAATGGAAAACTTTCACTGGACACTACGAAATTGT
TTTTATATCAACTTTTAAGAGGATTGAAATATATTCACTCTGCAAATGTT
ATCCACAGAGACATTAAACCAGGAAATTTATTCGTAAACTTGGACGATTT
AACTTTAAAAATTGGCGATTACGGACTTGCAAGAGTTTTTGATAATCGAT
ACGAACACAAAGGATATTTAACTGCTGTTGTTTCTACGAGGTATTACAGA
GCACCAGAAGTAATGAAAAATTTGGGTGACTACAGCTATCCTATTGATAT
GTGGAGCTGTGGCTGTGTATTTGCTGAAATGTTATCAGGAAAGATTTTGT
TCTCTGGTGAAAATGACTTGGATCAACTCAATGTTATATGTTCAGCATAT
GGAGTTACACCCGACAATCTCCTCACAGAAACTAGCTCCTTTCCTGAACA
TCTATTTGTTGGACTTCCTCCAGAAGCAATCGATTTGCTCTCTCGAATGT
TATGTCTCGACCCTGATGAACGAATTACAATTACTGAAGCATTACAACAC
CCCTTCTTATCCGAATTACACGATCCAATCGATGAACCAATTTGCGAATA
CCCGTTTCAAATCGAACACGAAATCGATAATCTACCCGTCAAAATCTTAA
AACGTAAAATTCTTCGAAATTCCTGCGTCAGCTCTTACGAAAAGAAATCG
TACCATTCGTCAGAGGAAAACCTTTTTAAAGACTTTGACGAGACCTTCTC
ATGTTATTGTCCAACTGAATCAGTTAGCCGTAGGAACAGTAAAAATACAC
GCAATCGTTTGAGTGTCGTTACAAAGTTCAATTCACATGGTGAAGAGATG
TGGAGTTCGAACACAAATTCATCGGTCGAATCTCCTACTCATGATTATAA
AAGATACCAAGAAGATCTCCCAAAAATTACATCTGAAAGCGAAGTCTTTT
TACCATCCTTACAAGACGCGATGAGTTCTTGTCAAGTCCTGATCGACGAA
CCGTTCCGTGATCCAGGAGTCTGTTCCCGTATGTACCACGAGGATGATTC
GGCTCCCGTGAAAAGCAACCAATTTTTATCCGCGGACACTTCAAACGACT
TTTCATATTTCTCAGACTTATCACCTGTGATTGATCTGAGTGAACCGTGT
TACAATTTAAACGAAAAGAAGAAAGACTTGAATAATAATAATGGTAGCAA
TAACACCAAAGTTAGCAATAATAATAAAATGGAAACGGCTCCTTTTTTAG
GGGACCATGGACGCTCCAGCGCCATCAGTATCGAAAGTAAAAAATCTCCG
TCCTTGAAAAAGGTACGTGAGACCACTGTTAAAAATGGTCACACTTCAAC
TTTCACTGAAATTAAATTTGAAAGTTCAACACCGACAAACTGTAAAAGTA
TTGACGAATTACGGGATTTGAATAGTGAGATTTTGCGCACGCTCAATGAA
CGTCACACGGCCTCGAAATGTAATTTTCAAGCCATGATTACGGACAGATT
GTCAAATTCCTCGAAACATTTTTCGCATTGGGATTCTTTGAAATTATGGA
TTTGAATGCCTGGAAATTGTGAGCAGTTTAATACTTTGAGCTCTCTCAGT
TCAAAGTTTTCAGATTTAAAAGTTATTGCTGGTGGTGGCAGTGGAGTTGT
ACTATCAGGAGTTGATAAATCACTTTCAGAAAGCTCGTTACCCGACAAAG
ATGGATCACAAGTTGCATTAAAAAGACTTTCCTTGGTTGGCAAAGGACAT
TGCCGTGTCGCCTTACGAGAACTACGTTTATTAAATCGATTCGTTCACGA
AAATGTCGTAAAAACATACAAAATTACAGACTCAAACGGATCAACAATTG
ACGATCCAACCCTTGAAAATTTTAAAGATTTAGATTCTGTTTATGTTGTT
GAAGAATTACTCGATACAGACTTGCATAAAGTTATCGAAAGAAATGGAAA
ACTTTCACTGGACACTACGAAATTGTTTTTATATCAACTTTTAAGAGGAT
TGAAATATATTCACTCTGCAAATGTTATCCACAGAGACATTAAACCAGGA
AATTTATTCGTAAACTTGGACGATTTAACTTTAAAAATTGGCGATTACGG
ACTTGCAAGAGTTTTTGATAATCGATACGAACACAAAGGATATTTAACTG
CTGTTGTTTCTACGAGGTATTACAGAGCACCAGAAGTAATGAAAAATTTG
GGTGACTACAGCTATCCTATTGATATGTGGAGCTGTGGCTGTGTATTTGC
TGAAATGTTATCAGGAAAGATTTTGTTCTCTGGTGAAAATGACTTGGATC
AACTCAATGTTATATGTTCAGCATATGGAGTTACACCCGACAATCTCCTC
ACAGAAACTAGCTCCTTTCCTGAACATCTATTTGTTGGACTTCCTCCAGA
AG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000182_pilon | genome | sc0000182_pilon:404142..408662 - |
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