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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000179_pilon:693761..699698+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17624.2.p1 ID=MSTRG.17624.2.p1|Name=MSTRG.17624.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5938bp|location=Sequence derived from alignment at sc0000179_pilon:693761..699698+ (Clytia hemisphaerica_ch_hm2_pilon)
AATGACGTCCAGTCCACAATTACTACTGTTACTGATCAAAGTACGCAACT
TTTATCATTGGTCAATTCATTAGTCGACAGCCGCCTGAACTCATTTTTTG
CTTCATCACAATCATCTTCAAGCCAACTGGCCAGCCCTGTCCTGCCCAGT
ACATCACAGGACAACGTTCTTCTCTCGACCATTGCGACGTCGTCAAGCCT
GTCAAGTCAACAAGATTCAACTCCCACCACCAACACGCCACCCATGAATA
GTTCTTCCGCCCTTATCAACGCCCTTCTCACGGCTAATAATGGTACCCTC
GCTATGGGCAATCAAAACATCACGCTTTCCTCGCAACCACACCTTGctgg
tcaaaatcaaaacactttCAACTTTGTCAACAATTGCAACAACGAGCTCC
CTGCGATACctgcaaaaatattgaaacaaatTAAGAGTGGTGagtttgtt
gattttgattttcttctacCTTCCAACATTGGCCGGcctcttaattctgc
tgtatctcTGGCCTTCGATTCGGAGGGCAACATCTCTTTACaaaaaaaCG
ATACTGCCATTcaacaattttcaaagaaagccaAGGTTATTGACCTAAAT
TCTTGGTTAATGGCATGGTCCAGATTTTTCCAAGCTTCATTAGTCTTTAG
ACCCAACCTGGCCAATCAGATGATTGCATATCAGATTTATATTGCCCATT
TGGCTAATGACTATTCCTTTGCTGGCTGGTACTCCTACGACAAGgctttt
agaacatttttgacCAACAACCCGGTAGCTAGATGGGATACGTccaacca
aaatctttttaactTGCACCTCTTGGGTCACAAGCAGCCGAGCCAGTGTT
ATATCTGCCAGAGCAAGGACCAtctcgccccccgctgcccctcttctgcc
ccctccacctcttttgcccgcccttcttctgtttctCAGACAGCGCACCA
TTTTCCTGCCCCACGGATGCCTTCTCAGCCTGGACCCCGCCCTCGCCCCC
CATCTTTTCCCCGTGCTCAGTACTACCAGCCCTACCCTAACCTTCGTCAG
CCCTTTCCTGCCCCCCAGCAAGCTGCCTCTGCCGCCAAACCTGCCAACTT
CTGCCACAACTTTAACTCCAACATCCAGTGTCGACCCTCCTGTCGATATC
TCCACAGTTGCCTCATCTGCAACTATCCCCATCCTGTCATGCAATGTCCC
TACCGCCCCCAGTGATCACCAAATTCTTCTCAACCTCCCAATAGGTTCCT
CTCTCCCTTCTTCCTTCAAGCCAGCTTCCCCTGTTAAACCCCTTGTCTTG
TTTGAGTTCCTCGACGGGTATGACCCTGAGATCGTTGAGTTTCTTGTGTC
TGGGTTCCTTACAGGTTTTCACATTGGCTTCCAAGGTCCACCACCAGTTG
GCCCTGAACGTAACAACCTTTCAGCAGATTCCAACTGCGAGGCTGTCTCT
ACAGCCATCCTGAAGGAATTGAAGCGTGGGCATACTGCTGGCCCTTTTGA
CACCCACCCCCTCCCCTCttttttttGTTCCCCCCTCGGTGCTGCCCCCA
AAAAAGATGGAACAAAACGGATCATCCTCGACTTGTCCTTCCCCCCTGGT
TCATCTGTCAATGATGGCATCCCTGTAGAACTGACCCATGTCCAGTATAC
CCCCTTCGACGAAGCCCTTGACATGATCCGTTTGATGGGCCCTGGTTGCT
ACATGGGAAAAATCGACATCAAGCACGCCTTTCGCCTCTGCCCAGTCCAC
CCCGACGATTGGCCCCTCCTGGGATATTGCTGGCAGGGTAAGTACTTCTT
CGATCTTTGCCTTCCTTTTGGTAGTCGCTCCTCTCCTTGCATTTTCAATA
TGTTTGCTGATGCCTTGCAATGGATCCTTGTCCGGAAATGCCTTATCACT
GCTATCTCTCACTATCTTGACGATTTTATCCTTTGTGCTCCTTCCTTTAA
CGAAGCCCAGCTTAAGATGGATGTCGTTCAAGCTCTCTTCAAGGATGTTG
GTGTGCCCGTTGCCTTGGACAAGTTGGAGGGCCCCAGCCAGGTGATGACG
TATTTGGGCATCGAGATTGATTCTGTTTCCTCTTCTATTCGTCTGCCTAC
CAGTAAGCTTGTGGAATTGAAAGGTATGGTTTCTGCTTGGCGTTCAAAGA
GGAAGTGTACTAAACGTGAGTTGTTGTCTCTGATTGGTTCTTTGTCATTT
GCTTGTAAAGTCATCCGTCCAGGTCGTATCTTTTTGCGTCGTCTCATTGA
CTTGTCTTCTTCGGTTGTTCGCCTTAACCATCACATTGACTTAACTTCTG
ATGTTCGCCTTGACTTAGAGATGTGGTCTGAGTTTCTCGATTCTTGGAAC
GGTTCTTCCTTTATTCCTACACCTATTTCTCTTCAAGCTCCTTTTGAGAT
TTCAACTGATGCGTCCTTTCTtggttttggttgttttttccaGGGTCTTT
GGATTTCTGAGGCTTGGCCGTTTGACGTTTCTCTTCTCACTCACATCTCC
TTCCTTGagttttttgctatttttgcatCTCTTAATACCTGGCTTAAGTC
TTTCAGCAATTGCCGCATCGTTGTCTCCACAGACAACGAGCCCACCGTCG
CGGTCTGGTCATCTTCCTCTTCCAAGGATAAGTCTATGATGGTTCTCATT
CGCAAGATTTTCTTCCTAACTGCTCGAAACAACATCCACCTTTCATTTCG
TCATGTCCCTGGCTCTGAGAATGTTTTTGCTGATCTTTTATCTCGTTTGC
AGGTCGAAGAATTCAAATCAGTCTGTCCAGGGTGTTGTCCCTTCCCGTCA
ACTGTTCCCAACTCTGTAATGGATCTCTTGGCCACGATCTTGTTGGGCTC
CTGAAGGATTCTCTTGCACCATCTACTCAAGCTACATACATGAGTGGTAT
CCGTTCTTACATCAACTTTTGCGACTCACATGGCTTAATACCTTTCCCTA
GTTCTGAAGCTTTGTTGTGTTTCTTTTCCGTGTTTTCTTTTAACCGTGGC
ATTGCTTGCAAAACAATAAAAGTTTATATCACTGGAGTACTACACCAAAA
TTCAATGCTTGGCTCAAGTCTGCCCCTTGCCCTTATGCCCATACTTCACC
GTGTCATTCGAGGCATTCGTAGACGCCAAGGAAATTCACTTACCCGCAGA
CCACGTAAACCCATCACCACTTCCCATCTTCGAGTCATTTCAAGATTCTT
ATTACTTTGCAGCCATCCCACTCAAGACAAGTACATGCTTTTAGCCGCAT
GCCTAACCGCCTTTTTTGGCCTTCTTCGTGTGTCCGAGTTTTCCTGTCCC
TCTCAAAGTCGATATGACCCGTCAATTCACCTCATGAAGTCTGATGTTAC
CTTCAACCTCAACCACTCCCTAATGACCATCCGTATTAAAGGAAGCAAAA
CCGATCCGTTCCGCCAAGGTGTTAATATTAGGATTGCTGCTACTTCCAAC
AATATTTGCCCAGTGGGCGCTATGAGAAACTACCTAGCCCTTCGAAGTTC
AAAACCGGGCCCCCTCTTTCAATTTCATGATGGTAAACTCCTCACCCGCC
GAACATTATACGCCTTACTCGAGCAATCCCTCCCGTCTGTTTCCGACTTG
AACACCCATAGTTTTCGTATTGGTGGTGCTTCTGCCGCCTTGAGCGCAGG
TGCCTCCGACTCAATGATTCGCATTATGGGCAGGTGGTCCAGTGACTGTT
ACCTTCGTTATCTTCGTGTTTCGGATTTTGATATTCAAAAATTCACTGCT
AATATGGCCAAGATATCTCATGTGTCGTCTACTTGGGACCCCGACAAGTG
GTAATTTGTCTACAATGTCATGTAtttttttATGGTACTTGTTTGTTCTA
CCCGGTCTTTTTAGTTCATACCATGCTATTATTTTTGCTGAGTGCACTAT
CAATATATTGCTCGTATTAATTTTGATTGTCTTCACAATATCGCTTGCTT
TATTTTTATTAATAGTAATAATAatcataaaaacattttaatacgCTCTT
TGCTACCGAAATAATACTAATACGCTATTACGTTTAATCATAAGGTTTTG
TTTTCTGCCTTTTCTCGTCTCACTCTCTACCTTGTGCTTTGCCCTAGATA
GCCCCCCTTTACCTTTTTTCCTCTCTGCGGTTTTTGGGTGATGTTGGGGT
GTTGGGTTACTACGTAACCTCTGGCAAGTTATTAGTCAGTTATCCAGATA
CTTATTCTAAGGTCAGGCATCCGTCGTCTACACGGACTTAGGGCGTaccg
tcatctacacgggctTAGGTGCtacccgtcatctacacgggcaTAGGTCG
tacccgtcatctacacgggttAGGCGTTAAGTTTAGTCACAGCTTATCTT
GATGCATCCCCAATGTCATCCCAAATTCCGTTTTGTACAATTTTTAATTT
GCACTTTCATTCACCTTTCGAAATATAATTTTCTCTTTCGGCACTCCTTA
TGTCTCCTGTTTCTTTCACCCCTTTTGATTTGACCCCTTTGCCTCGTTAG
CTTCTCATTTCGATCTATTACTTATTCTTGGAGACGCGGGAATTAATTGG
AGCTAATCTTTAGCTAAGGTTAATTCCCAGTCGACTGAGTTACATCGGGT
TGCGGAAAAGGTTAGGATTAGGTATTTCTCGGCTGCCGGTTATCTGAGTT
CCCGTATATATATTCCAAGGGTGTGTTTGCCCTGAGCTTATCTCTTCATC
TGCAAGTTAAGCTTCCCCTCCCTTCCCTGCccctttttatctttgttttg
tttgtggTTCTGCCTTTCTCTCCTTTCTTTTCAGATCTTATCCTGCTATC
AAGGCGTGGTCATCGCAGCTGCAGCGTTGGATCCTAATCTCACGGTTTTT
CCCTAGGCAAGGTTTTTCGACCAGAGAGATTAGGCCATTTGGGATGCATC
GAGATACCAATTAGTTTCCGGTTACCACGTAACCTTTGGCAAGttttttt
GTGTTAGTTATCCAGCTACTTGTTTATAAGTCAATtacccgtcatctaca
cgggccTAAGCTGCtcccgtcatctacacgggctAAGTTCGCtcccgtca
tctacacgggctAAGTTCGCtcccgtcatctacacgggctAAGTTCGATC
CCGTCGTCTACACGGGTTAAGTTTTGCTCCCGTCGTCTACACGGGCTATG
GTCTCAcacccgtcatctacacgggttAAGTTCGTtcccgtcatctacac
gggctAAGTTCGCtcccgtcatctacacgggctAAGTTCGATCCCGTCGT
CTACACGGGCTAAGTTCGATCCCGTCGTCTACACGGGTTAAGTTTTGCTC
CCGTCGTCTACACGGGCTATGGTCTCACACCCGTCATCTACACAGGTTAA
GTTCGTtcccgtcatctacacgggctAAGTTCAATCCCGTCGTCTACACG
GGTTAAGTTTTGCTCCCGTCGTCTACACGGGCTATGGTCTCAcacccgtc
atctacacgggttAAGTTCGCTCCCGTGAGCTCACGGGCTAAGCTTGCtc
ccgtcatctacacgggttAGGCGTTCAGTTAGTTTAGGGGTGTTGGGTTA
CTACGTAACCTCTGGCAAGTTATTAGTCAGTTATCCAGATACTTATTCTA
AGGTCAGGCATCCGTCGTCTACACGGACTTAGGGCGTaccgtcatctaca
cgggctTAGGTGCtacccgtcatctacacgggcaTAGGTCGtacccgtca
tctacacgggttAGGCGTTAAGTTTAGTCACAGCTTATCTTGATGCATCC
CCAATGTCATCCCAAATTCCGTTTTGTACAATTTTTAATTTGCCCTTTCA
TTCACCTTTCGAAATATAATTTTCTCTTTCGGCACTCCTTATGTCTCCTG
TTTCTTTCACCCCTTTTGATTTGACCCCTTTGCCTCGTTAGCTTCTCATT
TCGATCTATTACTTATTCTTGGAGACGCGGGAATtaac Coding sequence (CDS) from alignment at sc0000179_pilon:693761..699698+ >MSTRG.17624.2.p1 ID=MSTRG.17624.2.p1|Name=MSTRG.17624.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2982bp|location=Sequence derived from alignment at sc0000179_pilon:693761..699698+ (Clytia hemisphaerica_ch_hm2_pilon)
AATGACGTCCAGTCCACAATTACTACTGTTACTGATCAAAGTACGCAACT
TTTATCATTGGTCAATTCATTAGTCGACAGCCGCCTGAACTCATTTTTTG
CTTCATCACAATCATCTTCAAGCCAACTGGCCAGCCCTGTCCTGCCCAGT
ACATCACAGGACAACGTTCTTCTCTCGACCATTGCGACGTCGTCAAGCCT
GTCAAGTCAACAAGATTCAACTCCCACCACCAACACGCCACCCATGAATA
GTTCTTCCGCCCTTATCAACGCCCTTCTCACGGCTAATAATGGTACCCTC
GCTATGGGCAATCAAAACATCACGCTTTCCTCGCAACCACACCTTGctgg
tcaaaatcaaaacactttCAACTTTGTCAACAATTGCAACAACGAGCTCC
CTGCGATACctgcaaaaatattgaaacaaatTAAGAGTGGTCGAAGAATT
CAAATCAGTCTGTCCAGGGTGTTGTCCCTTCCCGTCAACTGTTCCCAACT
CTGTAATGGATCTCTTGGCCACGATCTTGTTGGGCTCCTGAAGGATTCTC
TTGCACCATCTACTCAAGCTACATACATGAGTGGTATCCGTTCTTACATC
AACTTTTGCGACTCACATGGCTTAATACCTTTCCCTAGTTCTGAAGCTTT
GTTGTGTTTCTTTTCCGTGTTTTCTTTTAACCGTGGCATTGCTTGCAAAA
CAATAAAAGTTTATATCACTGGAGTACTACACCAAAATTCAATGCTTGGC
TCAAGTCTGCCCCTTGCCCTTATGCCCATACTTCACCGTGTCATTCGAGG
CATTCGTAGACGCCAAGGAAATTCACTTACCCGCAGACCACGTAAACCCA
TCACCACTTCCCATCTTCGAGTCATTTCAAGATTCTTATTACTTTGCAGC
CATCCCACTCAAGACAAGTACATGCTTTTAGCCGCATGCCTAACCGCCTT
TTTTGGCCTTCTTCGTGTGTCCGAGTTTTCCTGTCCCTCTCAAAGTCGAT
ATGACCCGTCAATTCACCTCATGAAGTCTGATGTTACCTTCAACCTCAAC
CACTCCCTAATGACCATCCGTATTAAAGGAAGCAAAACCGATCCGTTCCG
CCAAGGTGTTAATATTAGGATTGCTGCTACTTCCAACAATATTTGCCCAG
TGGGCGCTATGAGAAACTACCTAGCCCTTCGAAGTTCAAAACCGGGCCCC
CTCTTTCAATTTCATGATGGTAAACTCCTCACCCGCCGAACATTATACGC
CTTACTCGAGCAATCCCTCCCGTCTGTTTCCGACTTGAACACCCATAGTT
TTCGTATTGGTGGTGCTTCTGCCGCCTTGAGCGCAGGTGCCTCCGACTCA
ATGATTCGCATTATGGGCAGGTGGTCCAGTGACTGTTACCTTCGTTATCT
TCGTGTTTCGGATTTTGATATTCAAAAATTCACTGCTAATATGGCCAAGA
TATCTCATGTGTCGTCTACTTGGGACCCCGACAAGTGGTAAAATGACGTC
CAGTCCACAATTACTACTGTTACTGATCAAAGTACGCAACTTTTATCATT
GGTCAATTCATTAGTCGACAGCCGCCTGAACTCATTTTTTGCTTCATCAC
AATCATCTTCAAGCCAACTGGCCAGCCCTGTCCTGCCCAGTACATCACAG
GACAACGTTCTTCTCTCGACCATTGCGACGTCGTCAAGCCTGTCAAGTCA
ACAAGATTCAACTCCCACCACCAACACGCCACCCATGAATAGTTCTTCCG
CCCTTATCAACGCCCTTCTCACGGCTAATAATGGTACCCTCGCTATGGGC
AATCAAAACATCACGCTTTCCTCGCAACCACACCTTGctggtcaaaatca
aaacactttCAACTTTGTCAACAATTGCAACAACGAGCTCCCTGCGATAC
ctgcaaaaatattgaaacaaatTAAGAGTGGTCGAAGAATTCAAATCAGT
CTGTCCAGGGTGTTGTCCCTTCCCGTCAACTGTTCCCAACTCTGTAATGG
ATCTCTTGGCCACGATCTTGTTGGGCTCCTGAAGGATTCTCTTGCACCAT
CTACTCAAGCTACATACATGAGTGGTATCCGTTCTTACATCAACTTTTGC
GACTCACATGGCTTAATACCTTTCCCTAGTTCTGAAGCTTTGTTGTGTTT
CTTTTCCGTGTTTTCTTTTAACCGTGGCATTGCTTGCAAAACAATAAAAG
TTTATATCACTGGAGTACTACACCAAAATTCAATGCTTGGCTCAAGTCTG
CCCCTTGCCCTTATGCCCATACTTCACCGTGTCATTCGAGGCATTCGTAG
ACGCCAAGGAAATTCACTTACCCGCAGACCACGTAAACCCATCACCACTT
CCCATCTTCGAGTCATTTCAAGATTCTTATTACTTTGCAGCCATCCCACT
CAAGACAAGTACATGCTTTTAGCCGCATGCCTAACCGCCTTTTTTGGCCT
TCTTCGTGTGTCCGAGTTTTCCTGTCCCTCTCAAAGTCGATATGACCCGT
CAATTCACCTCATGAAGTCTGATGTTACCTTCAACCTCAACCACTCCCTA
ATGACCATCCGTATTAAAGGAAGCAAAACCGATCCGTTCCGCCAAGGTGT
TAATATTAGGATTGCTGCTACTTCCAACAATATTTGCCCAGTGGGCGCTA
TGAGAAACTACCTAGCCCTTCGAAGTTCAAAACCGGGCCCCCTCTTTCAA
TTTCATGATGGTAAACTCCTCACCCGCCGAACATTATACGCCTTACTCGA
GCAATCCCTCCCGTCTGTTTCCGACTTGAACACCCATAGTTTTCGTATTG
GTGGTGCTTCTGCCGCCTTGAGCGCAGGTGCCTCCGACTCAATGATTCGC
ATTATGGGCAGGTGGTCCAGTGACTGTTACCTTCGTTATCTTCGTGTTTC
GGATTTTGATATTCAAAAATTCACTGCTAATATGGCCAAGATATCTCATG
TGTCGTCTACTTGGGACCCCGACAAGTGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000179_pilon | genome | sc0000179_pilon:693761..699698 + |
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