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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:252296..254493- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16635.2.p1 ID=MSTRG.16635.2.p1|Name=MSTRG.16635.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2198bp|location=Sequence derived from alignment at sc0000159_pilon:252296..254493- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGGTCTAAAGCCACTCCTTTTAGGTTCTTTACGTGCTTTATACACTAA
TAATCAGATCCTTCAAATCTGTCATGGACCATCGAATATTCTCAGGAAAT
ATTTCATCGTTTTGTTGTTTTGACTAAATGAATGGTATTTGACGTCCTTG
GGGGGTCACTTCATATTTTAACAAGAGGAAAGGAAGAGGACTATTTATCC
GCGTGAAGAAAGCACTTCAAAGGCATTGACATTTTTCTTGTTTATCTAAC
AGAGATGTCCTATTCATCAATTACGTGAGGGACTGGGTATGACTTTTTTT
CTTTGCTTTTGTTCCCGACAAAACCCATAAAGGAACTAGTACCGTTTGAA
AAGAAGGCAGTCATTAATTTTTGTAGCGAACTAAAGGAAGCTAGATTTTT
GTCGCATATTCTTGATTTTTTGGATCTAATTACTCAGGTATGTTTGATAT
GCATCTAATGTCTAGCATTTAATAGATTGTCGCGTACTCTTTGAGAAGAT
TCTCTTTAGATGATCATTAAAAGATTTTTAATTACATTTTAATTCTTAAT
GAGGTGTTTAAAGAATGTCTAATTTAGCAGACTTTGGTCGCGCATGTAGC
TTTAGTATGACAGTCGAAGCTATTTTTTCTTCTTGACACAATTCGAAGAA
TGATAATAGCTCTACCGGACATAATAATGGTTCCAATGTCATCATACTTC
GAATTCCTGGTTTTCAAACTCATTAATCAACTTTTATTGTATGTTTCTAT
TGTTTTAATAAACATTTGTTTAATTGTATCTATTGTTTTCTTAATATAAA
TAGGTCGTGTTTATCTTGTCAACGCATCATTCAAAAGATTGCACTCACGA
AGTAAACAGCAAGAATTCAAATCAAAGAACTTAATCAACAAACGATACAA
ACTTCAACAAAGATGAATCAATTACAACTCTTATGTCTGGCAATCCTCTG
CACTGTCACATTTGCACGATATGCACCAAGTTACCAAAGATGTGAACCTG
TACGTGTTGAAATGTGTAGAAACCTGGATCCAAAGAATTGGGTTCGAACC
TCGTTCCCAAATTTTATGAACCATTCATCATCCATTGTTGCTGAACGAGA
ACTTAAACAATATTATGACATCATTGATTCCAACTGCTCGCCATACCTGA
CAACTTTCTTATGCTCTTTATATATGCCAATCTGCAAAGCTGGTATTGGT
CGTATCCCACCTTGCAAATCATTATGTCAAGCAGCACGCTCTGGATGTGA
ACCATTGTTGAATTCAGCTCACATCAGATGGCCTTATTCCATGAATTGTG
ACCAATTCCCAGACAGTGGACAACTTTGCATTGATTTACCAGAAACAGCA
CCAACACCAAAGGCTCTGGATGAAGTTGAAGCTAATCAAATCCCTTCTAA
AAGAACAGTCATCAAGAAAGGTGAGAATACTTTTCGAACTTGATTTTACC
TTTTTACTGCTGAAAATACCATCAGATTGCAATTTTCTTGATTCCAGTTT
ACTGACTTAAGGTGATTTGGAACTTTTTAATCATATTTTCTTTAAACAAT
ATCTAAATCAAATCTTTTATTTTCACAGATAAATTACCATCAATCGCAAA
AAAGGATCTGAAACCATTAGAAGAAGTCGTTCTAGAATGTCCACCTGATA
AACAAATCATGGTCCGTAAAATTCGTCATTTTCCAGAACGTAATACTGAT
TGCTGCCCTGTAGACTCTAAAGAAAAGATCTCAAGAGGATGCAATGGTAA
ACAAAAATGTGAAATCATCTTAGATGAAAACGTCATCGGACATGGTTGCG
TAACATCGATGGAGAAAACTTCCGTCAAATATAAATGTGTCGGACTTCAG
CATAACGTCAAGACGCGTAAATCAATTGGGTGTCGGAAAAACAATAAAAA
TGGTATATAGAAACATATTTCAATAGACTTATAATTGACTATGAGACATA
CCCAAAAATGAAAGAATTATTCCGACTGCAGCGAGACCAACGCGATGGTT
TTCACACTTTATTTATACACTAAACATAGATTTTATTGAAAAAATTTAAT
GTAAATTTAAGTTATAAAGAGTTAAAAAATTTTAACCTGTTTTTCTTTCT
GTTATTAGTTTTTTTATCATTTATCTTAATTTTAAAAACATTGTAAATAT
TTTATATTAAAAGATTAATTAGAAAAATAAATATTATAAGTAACAACA Coding sequence (CDS) from alignment at sc0000159_pilon:252296..254493- >MSTRG.16635.2.p1 ID=MSTRG.16635.2.p1|Name=MSTRG.16635.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1680bp|location=Sequence derived from alignment at sc0000159_pilon:252296..254493- (Clytia hemisphaerica_ch_hm2_pilon)
ATAAATTACCATCAATCGCAAAAAAGGATCTGAAACCATTAGAAGAAGTC
GTTCTAGAATGTCCACCTGATAAACAAATCATGGTCCGTAAAATTCGTCA
TTTTCCAGAACGTAATACTGATTGCTGCCCTGTAGACTCTAAAGAAAAGA
TCTCAAGAGGATGCAATGGTAAACAAAAATGTGAAATCATCTTAGATGAA
AACGTCATCGGACATGGTTGCGTAACATCGATGGAGAAAACTTCCGTCAA
ATATAAATGTGTCGGACTTCAGCATAACGTCAAGACGCGTAAATCAATTG
GGTGTCGGAAAAACAATAAAAATGGTATATAGATGAATCAATTACAACTC
TTATGTCTGGCAATCCTCTGCACTGTCACATTTGCACGATATGCACCAAG
TTACCAAAGATGTGAACCTGTACGTGTTGAAATGTGTAGAAACCTGGATC
CAAAGAATTGGGTTCGAACCTCGTTCCCAAATTTTATGAACCATTCATCA
TCCATTGTTGCTGAACGAGAACTTAAACAATATTATGACATCATTGATTC
CAACTGCTCGCCATACCTGACAACTTTCTTATGCTCTTTATATATGCCAA
TCTGCAAAGCTGGTATTGGTCGTATCCCACCTTGCAAATCATTATGTCAA
GCAGCACGCTCTGGATGTGAACCATTGTTGAATTCAGCTCACATCAGATG
GCCTTATTCCATGAATTGTGACCAATTCCCAGACAGTGGACAACTTTGCA
TTGATTTACCAGAAACAGCACCAACACCAAAGGCTCTGGATGAAGTTGAA
GCTAATCAAATCCCTTCTAAAAGAACAGTCATCAAGAAAGATAAATTACC
ATCAATCGCAAAAAAGGATCTGAAACCATTAGAAGAAGTCGTTCTAGAAT
GTCCACCTGATAAACAAATCATGGTCCGTAAAATTCGTCATTTTCCAGAA
CGTAATACTGATTGCTGCCCTGTAGACTCTAAAGAAAAGATCTCAAGAGG
ATGCAATGGTAAACAAAAATGTGAAATCATCTTAGATGAAAACGTCATCG
GACATGGTTGCGTAACATCGATGGAGAAAACTTCCGTCAAATATAAATGT
GTCGGACTTCAGCATAACGTCAAGACGCGTAAATCAATTGGGTGTCGGAA
AAACAATAAAAATGGTATATAGATGAATCAATTACAACTCTTATGTCTGG
CAATCCTCTGCACTGTCACATTTGCACGATATGCACCAAGTTACCAAAGA
TGTGAACCTGTACGTGTTGAAATGTGTAGAAACCTGGATCCAAAGAATTG
GGTTCGAACCTCGTTCCCAAATTTTATGAACCATTCATCATCCATTGTTG
CTGAACGAGAACTTAAACAATATTATGACATCATTGATTCCAACTGCTCG
CCATACCTGACAACTTTCTTATGCTCTTTATATATGCCAATCTGCAAAGC
TGGTATTGGTCGTATCCCACCTTGCAAATCATTATGTCAAGCAGCACGCT
CTGGATGTGAACCATTGTTGAATTCAGCTCACATCAGATGGCCTTATTCC
ATGAATTGTGACCAATTCCCAGACAGTGGACAACTTTGCATTGATTTACC
AGAAACAGCACCAACACCAAAGGCTCTGGATGAAGTTGAAGCTAATCAAA
TCCCTTCTAAAAGAACAGTCATCAAGAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:252296..254493 - |
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