|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:93584..100118- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16622.2.p2 ID=MSTRG.16622.2.p2|Name=MSTRG.16622.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6535bp|location=Sequence derived from alignment at sc0000159_pilon:93584..100118- (Clytia hemisphaerica_ch_hm2_pilon)
TTCATTTTGATGGAAGTTGTCTAAAAAACTACTCAAACTGGCACTTGTAT
ATACAACGTTTTCTATTTCTAAGGTCCTTTTCTTTCAAAGTTATTTTTTA
AATTAGTTTGAAGCTTGCATTAGTTGAATTTAATTCTACTTTAGCTCAAA
AAATTTGCAACTGAAAGACATATAGGCAACCCCTACACCAACAATATCAT
ACTCCAGGATACAAATGAAATTTTTCAATTTCAGAACTAGATGCCCCTGT
TTGGTTATTATCAGTTAGGGTTAGGGTTGGAGCTCGAGAGTCAAAATATA
AGGCTGAAAGCCTTCTCAGGGGCATTTGTATCCTTGTAGGGGCACTGATA
GGGTTTGGAGCTTTGTTAATTAAAAGGTCTGTAAATTACATGCTATAAGT
ATTTTTGTGAATGACAGCATTCTGCCGTGTCACGTTGGCGCAATCTGTTA
GGCATTGGGTTTATAAACCAAGGTTGCTTGCATTTGGTGGTTCAAGCTGA
GGTAGGAGACCTATTTCACTGCAAATTTCAGAAAAATTCTTAGAAAACAG
TTAGAAACACTTGAGAAAGTCAGAAAATCAGGACAGAAGTCAGAAGATAG
GAAAGTAGAAAATAGGGGAAAATAAGAGACAATGCATCTTGGAGTATGAT
ATCGTTTGCCAACCTACACTGTACAGGTGTACTGTCACCTTTTATGGAGA
TAGGAAAGAAAGAATTTAAGGTAGGTGTGGGAAGAATCTGATTAATTTTT
TTTTACACCAGTTTACACTGCTAAAACATAATATTATGATACGAAAGATG
GTTTTGGTAAACCAAAATCTTTCTTGGAAATAAAAAGCACTTTCAAATTT
AAATTAAGACTCAGTGTTTTACAATAAATCTCTCTTGGTTTCTCTTATCA
AGACGAGGAAGCTTGAATTTTTTTTTTGATGGTAATTCATTATTTCTAAA
TACCACAAATCACAGCATCAGCTGTAAGCAATTTATCATGATTAAAGGAG
TGTGTGAGGTAGATAATTAGAAATTTCTCTACAAAGTCTTTTAAAATTTG
TATACTTTGTGGTGGGGTGTTAAGCTTTATATTTCCAATGTCAGATTGTG
CTGCTCAACATTCCATTACATTCCAGCTAGGTTGACAATAAATTATTTCA
AGAAATAAAAAGTACATACTTACATTTTTATGACTTCTTTGTGTTTAGCA
GAAAGAATTAAAAAAAAAATGGTAGTCACAATCTCCATCAGAAATTTTCT
TCGAGCACAGGTAAAAATTTATTTCAAGTAGTTTTTCAACAAAAAGGCTG
TTTTTGTAACTTTTTGAGTACAAAAGTTTAGCAGAGTTATTGTTAACCAC
ACTTTTACTTTTTGAAAGACAGTAAAAAATGTCTACAATATACAACTGTT
AAGAGTAAGTTTTCATAATATTCTTATTTTTCAGAAATTAAACAAAGTCA
AAGGCGCTTTATCCATTGCGTCGAGATCCTTCTCAGAAATCAGAGTAAGT
TTTTTTTAACATTCTGTTGTTTTTTTATTTTGTGTAAAATTCCAATTGTA
CATAAAACAACTATCTCTAAATGTAACTTAGAAGTTAGTGTAATCAATTT
CTTTATAACATTATTATCTATATTTTTAAAGTACAATGACTTGAAAATCC
ATCAAACAACAACTCCAAGGGAAAAGCCATCTGCAGATTCCAAACTGGTT
TTTGGTAAACAAATGGCTGATCACATGCTTGTTGCAGAATGGACCATTGA
CAATGGATGGGATATTCCAAGTATTGTTCCATATGGCCCGTTAGCAATTC
CACCTTCTGCTTCTGTCCTACATTATGGCATTGAGGTTTGAACTTCTTCT
TTTTCTAGTCGCAGTCATTTGTTCTTCTGAACAAAAACTGAATTCCAAAA
AGTCATGTAGGTTAAATTATAGAATGCCTGTGGGTTGAAGGTTTATAAAA
AACAGTAAGAACAAAAACGTAAGACGGAAATTTTTCCCGAAAATTTTCCC
CTACATCCAATAAGATGATCTCAATTCGTTTTCTAAAAGATTTGTATTCA
AATAATTGGTAGTTACAATATTATATTACATTTCATTTTTAGGTATTTGA
GGGTATGAAAGCATATAAATGTACCGATGGATCAATACAACTTTTTCGAC
CAGAAGAAAATATGAAACGACTATTTGCTTCAGCTGAAAGGCTAAGTTTA
CCTGTAAGTTTTGCACCAGATAGCAAACTTAAATAACGAGTCTTAAAAAG
TACAAAAAAAATTAAGGTTTTATTTTTCCCCTATCTGGGAAAGGTTCAAC
ATCTGCTTCTAAGGCCTTACTGGATTGATCCTAACCAATTTTTTGAAGGT
GGCTTTTTTTTTTAGACATTTGACAAAGAAGAAGTTTTGAAGTGCATTGC
AGAACTGGTGCGTGTTGATCAAGACTGGATCCCAGATTGTGACAGCAGTT
CATTATATATTCGACCAACGATTATAAGTACAGAGGTATTGTTCCTATCT
GTGACTGCTTAAAATTTTTGTCATCATTGATTGTTAGTAAGTTGAAATGA
AGTCTCAAAATGCCGTAAGAGTCAAAATCTTACAGTGAATAACTGCCTTG
TAGAAAATGTTTGCTCCTACAAAACACTTGGGCACTGTATCTGTCGACTT
TTTCCCTTCTACTGTTTAAGCCTTCTCCATTGGTGGTAAGCCACCAGATA
GTGCAATGTTGTTCGTCATCACAGGTCCAGTTGGGTCTTATTACGACACA
GGAAGTTTCCAACCCATCTCACTTTTAGCAGACCCAAGTTTCGTCAGAGC
ATGGCCTGGTGGTATTGGAGATTGCAAAGCTGGAGGGTATATATTTCTAC
ATGTGTCCATGATTTGATCAATCTATTGGGAGAATCCTTTTATTTGTGTG
TATTTTGTTGTTAAAATTGTAAGGGAAAATACTGTAGGGAAAAAGTGAAA
TTTCTTTGTGGTACCTGTGTTGAAAATTATTTATTCTTGTCGTCATCCAT
AATTAAGATTTTATTCTCTTTAGAAACTACGGCCCAACGATATACGCGCA
AAAATTGGCTCAAGCAAGGGGCTGCTCTCAATGCTTATGGCTATACAAAG
ACCAAGTCACTGAAGTTGGAACCATGAATTTCTTCATGTTCTGGGTCAAC
GAACAAGGAGGTAAGTCTTAAAAAATGGTTCGAGATTGAAGAGTTTCATA
GATTTTTACCACAACTTAGTTTCGATTGTCTAACACTCACGTTTGATAAT
ATATACTATCAAAATGGCATTTCTTTCTTCCAAATTGCATAACTTGTGAC
CTATATTAATCACTGTTATGATTAAATCTCTATGCTGTGGTTAAGACTTC
TATCTTAGTCAGTGAATCTTTTGTAATCGTTTTTAACAGTTTTAAAAGAT
ATCCCTGTTATTTTTTACCTTCTATAGGTAGAATTGGTATTATGTAACGT
AGCACCCCTGCAGTTCACTTCTCCTACTTCATCTAGGCTTCTTATTTCCT
CAGTTAGCTGTGCATCAAAATGTGCAAAGGATTTAAGAAAAATTCCTTCC
TCCCTCAGTTGCTACTTCCTTGTTCAATACAATGCTGAATTTCCTTGTTT
GCCTTCGAGATGATTTCGATAATCTGTTATTTTACTTTCAGAACAAGAGC
TGGTCACGCCACCCCTTAATGGCCTGATTTTACCAGGAATCACGCGAAAA
TCACTCCTCGACCTAGCACGAGAATGGGTAAATAACTGAAATTCCTTTCA
AACTCCAAGACCTAATTACGATTACTCAGGGTGATCGTTCGATAGAAATG
TAATGTCATTAGACATCGAATAGCTTCCTTGCGGTATCACTTACATATTT
TTCCTTCTATGAATTTTCTCTTGTCGTGGTTAAAGTGAAGTTGCATAATG
ATTGTTTGACTTGCCCACATGGCACATTATCATGATCGATTTATCTCATG
AATTTTGAAACATGACCTCGTGAATTACAAATCCACTTTTAAACATCCTC
TTATTATCTTTCTGTGTTATCTTTTTTTATAAGATCAAGGTTTCTTCTAA
TTTCTTGTAACTCACGGTTTTTTAGATGATAAAGCCAAGCTGACTGATAA
TCCCCTAAATACACAAATATCCAAAGTTTCCGCCCCTTTTTGACCTTGTA
GAGCAGTCTATTTATCCTGAAACTCATAAGATAAGATTTATGTTTTGTGT
TTTGCATAAAATGCCTAATATTCTGCTTTGAAAACGATTTGCTGTCACTA
GAAATGGGAAACTCTCAATGAATATACTATGTAATAAGTGCCTTTTTATG
GAAAAACAAAACAAGCATCATAACTGTGAAACAAAAATAAACATTTTAAG
AACTTCTCAACAACTATCAGAAAAACTTATTTTGATATAATGTAACATAC
AATTTAAAACACACACACCTCCTTTTGACGTCAATGCAACCTGACACTGC
AATAATTTGTTTTTTGTTGATTATTGCTTTTCTCGTAATGCAGCGTCACA
TTGTCGCATCGGAAAGATAGAAATTGAACTGTTTGACATAAAACGATTTT
CATCACGCCCCCGTTTTAAAAAAATCCTGAAAAGTCTTTTTTAAAGCGAT
TGACATGCAGCTTTATGGAATTTTTAACTGGTGATGTTTTGTCAGTTTGC
ATATGATGAGTCATAACAATAGTTTACTGAGAGTTTAACCTGTAGCTTGA
AGCCTGAAGACCTTTAGAATAGCAGAATGACAGATTGTTTATAATCTTCT
TCGGTCCCATATTGATGTTTACGTTTTTACTCTACTTAGGATGAATTCAA
AGTCTCCGAAAGGGATTTCACTTTACAAGAGGTCGCCAAGGCTGCGTCAG
AAGGACGAGTATGTATATCTATTTTGTTGACAATTGCTTTGGTCAAGTAC
TCAAAAATAAGCGACCCTTAGGGCCAATTCCTCTACTTTCCGACTAACAA
TATAGGTACTTTCTATGTGAGACAATGTGGATTATGAGGATCAGGGTCAT
TTGAAACGACTTTTTCTAAGAGTTAAATTTTATTTATCGTCGAATTCTGT
GTTTCTTTTTGAGCCTATGCAGGCCTATGTTGTCTATTCGACGTTCTATG
TCCCTTTTGCTATAAACCATTTTAGGTTGGTAGGAAGATTTCGTGGACAT
CTTTATTTTTGATAGCGCTCGTATATGTAATATCCCATAAGTTTTTTCTA
TTTGAGAAACAAGAGAAATTAGAATTATTTTTTTATCGTAAGAGATAAGA
AAAACCTCAAGTCAAAAAGGTTTAAAGTGGAAGATTGAAAAGGTAGAATT
TTACAAAACATCTCTTCTATTTTTAGGTGAAAGAAATTTTCGGTGCTGGC
ACTGCAGCTGTAGTCAGCCCAGTCGATAAAATTCATTATCTTGATGACGT
CATCGAAATTGAAAATAACGGATTCCCAATCGCGCAACGTTTCTTTGATG
AGTTGACGAGCATACAGGTAAGATTGTTTTAGGTTTGTGTTTTTAAGCCA
CAAAGGGCGAAGCTCTCGCCCTTAAAGCATTGTTTGCTCCACTTAGAACG
CAAAATAAAGCTTTCATTAAAGGTCTTAAATACTCAAAATTACTAATTTT
TTGGTGTCCAGGGTTGTCATAGTTTAAAGACGAAAAGAGTTATGAAGCTT
AAAACTTGCAGATACGTCAAAGCTTAATTTAGTTATTGTTAAGTCCTGTT
GAATACGAAGTTAGATATAGCATAAATAGCTGAGGCTTATCTTATATCAG
ACTTGCATAAAAATAACGTTTTTTTGCACACTCATTATAATGCTATCACG
TGAAAGATCTTCCCAGTAGTTTAACTAAGATTATAGTTAGAGACGCTGGA
TGAAACTGCTGCAAAAAAGAGGCAAGAATATTTTGTGTTATTATTTAGTT
AGTTTAGTGTGGTATCGTCAAGTTATATATTGGACGATGAAAAAAAGGAT
CTGAGGCCGTCTATGTATATGGTGTTGTTTTTGTATATTTCTTAAAAATC
TAGTTGCTTGTATATAGTTGCTATCAGCTTTATTGTGGGCTGAGAAGGCT
GTCCTTCATTCGATAAGAAGATATCTTGCTTTGAAATCAACCGAATCAAC
TGAACTTCCATTATGATTAAAAAAAGTTTTATAGCTTTAGCTATTCCTCA
GGTATTCAGACTCGGACACAGACAGCAGCCATTTTTCCCTTCAGAGCATG
TATTCATTTTTGAAACCAATCCTATAAAAAATCATCAAAAACATGAAATC
ATAAATAAGTATTAAAAACATGATAGTACCGATAGCTTCAAAGATTTTAT
AAAGAAGGTTGCAGATATTTTTTTCTTGGTCAAGGCTCTCCAATAAAATC
ATGGTGACTTTGATTTTTCATTTTTCACTTTGCAGTACGGACGAACACCT
CACCCATGGAATTATCTGGTTGACTCGCAACAACTTCGACAAAAACAACC
TAACCTCCAGTAACAACAACAACCACTTCTAAATATCTTTCCAACCAAAA
ACAAAAAAACCTTTTTTACCTTTTATCAACACTTT Coding sequence (CDS) from alignment at sc0000159_pilon:93584..100118- >MSTRG.16622.2.p2 ID=MSTRG.16622.2.p2|Name=MSTRG.16622.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2055bp|location=Sequence derived from alignment at sc0000159_pilon:93584..100118- (Clytia hemisphaerica_ch_hm2_pilon)
TACGGACGAACACCTCACCCATGGAATTATCTGGTTGACTCGCAACAACT
TCGACAAAAACAACCTAACCTCCAGTAAGTGAAAGAAATTTTCGGTGCTG
GCACTGCAGCTGTAGTCAGCCCAGTCGATAAAATTCATTATCTTGATGAC
GTCATCGAAATTGAAAATAACGGATTCCCAATCGCGCAACGTTTCTTTGA
TGAGTTGACGAGCATACAGGATGAATTCAAAGTCTCCGAAAGGGATTTCA
CTTTACAAGAGGTCGCCAAGGCTGCGTCAGAAGGACGAAACAAGAGCTGG
TCACGCCACCCCTTAATGGCCTGATTTTACCAGGAATCACGCGAAAATCA
CTCCTCGACCTAGCACGAGAATGGATGAATTTCTTCATGTTCTGGGTCAA
CGAACAAGGAGTACGGACGAACACCTCACCCATGGAATTATCTGGTTGAC
TCGCAACAACTTCGACAAAAACAACCTAACCTCCAGTAAGTGAAAGAAAT
TTTCGGTGCTGGCACTGCAGCTGTAGTCAGCCCAGTCGATAAAATTCATT
ATCTTGATGACGTCATCGAAATTGAAAATAACGGATTCCCAATCGCGCAA
CGTTTCTTTGATGAGTTGACGAGCATACAGGATGAATTCAAAGTCTCCGA
AAGGGATTTCACTTTACAAGAGGTCGCCAAGGCTGCGTCAGAAGGACGAA
ACAAGAGCTGGTCACGCCACCCCTTAATGGCCTGATTTTACCAGGAATCA
CGCGAAAATCACTCCTCGACCTAGCACGAGAATGGATGAATTTCTTCATG
TTCTGGGTCAACGAACAAGGAGTACGGACGAACACCTCACCCATGGAATT
ATCTGGTTGACTCGCAACAACTTCGACAAAAACAACCTAACCTCCAGTAA
GTGAAAGAAATTTTCGGTGCTGGCACTGCAGCTGTAGTCAGCCCAGTCGA
TAAAATTCATTATCTTGATGACGTCATCGAAATTGAAAATAACGGATTCC
CAATCGCGCAACGTTTCTTTGATGAGTTGACGAGCATACAGGATGAATTC
AAAGTCTCCGAAAGGGATTTCACTTTACAAGAGGTCGCCAAGGCTGCGTC
AGAAGGACGAAACAAGAGCTGGTCACGCCACCCCTTAATGGCCTGATTTT
ACCAGGAATCACGCGAAAATCACTCCTCGACCTAGCACGAGAATGGATGA
ATTTCTTCATGTTCTGGGTCAACGAACAAGGAGTACGGACGAACACCTCA
CCCATGGAATTATCTGGTTGACTCGCAACAACTTCGACAAAAACAACCTA
ACCTCCAGTAAGTGAAAGAAATTTTCGGTGCTGGCACTGCAGCTGTAGTC
AGCCCAGTCGATAAAATTCATTATCTTGATGACGTCATCGAAATTGAAAA
TAACGGATTCCCAATCGCGCAACGTTTCTTTGATGAGTTGACGAGCATAC
AGGATGAATTCAAAGTCTCCGAAAGGGATTTCACTTTACAAGAGGTCGCC
AAGGCTGCGTCAGAAGGACGAAACAAGAGCTGGTCACGCCACCCCTTAAT
GGCCTGATTTTACCAGGAATCACGCGAAAATCACTCCTCGACCTAGCACG
AGAATGGATGAATTTCTTCATGTTCTGGGTCAACGAACAAGGAGTACGGA
CGAACACCTCACCCATGGAATTATCTGGTTGACTCGCAACAACTTCGACA
AAAACAACCTAACCTCCAGTAAGTGAAAGAAATTTTCGGTGCTGGCACTG
CAGCTGTAGTCAGCCCAGTCGATAAAATTCATTATCTTGATGACGTCATC
GAAATTGAAAATAACGGATTCCCAATCGCGCAACGTTTCTTTGATGAGTT
GACGAGCATACAGGATGAATTCAAAGTCTCCGAAAGGGATTTCACTTTAC
AAGAGGTCGCCAAGGCTGCGTCAGAAGGACGAAACAAGAGCTGGTCACGC
CACCCCTTAATGGCCTGATTTTACCAGGAATCACGCGAAAATCACTCCTC
GACCTAGCACGAGAATGGATGAATTTCTTCATGTTCTGGGTCAACGAACA
AGGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:93584..100118 - |
|
