MSTRG.16620.1.p1 (mRNA) -

Overview
NameMSTRG.16620.1.p1
Unique NameMSTRG.16620.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000159_pilon:70746..71659+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.16620.1.p1 ID=MSTRG.16620.1.p1|Name=MSTRG.16620.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=914bp|location=Sequence derived from alignment at sc0000159_pilon:70746..71659+ (Clytia hemisphaerica_ch_hm2_pilon)
tatcttttagtaaaaacagAAATTGTAAATTACAAAGATGGAGTTGGAAG
AAATGCTTTCCCACTTTCGAAAGCTAAAAGCATTGACAAAGAGTgaagtg
aaaagaaaaagatcaaacatgttgaaagaatttgatggcgactgtttttt
caaaattgcacTTTGGCCGAAgtttattcgaagaaaattcttttcgAGTC
CTTATGGCGATTGTGATACTTTGATTTTGTATCTGtttttttCAGGTAAA
ACATACTTCCTTACATGGTATTAAACACTCCCCCGGTGTAAATTTCAGAC
CCCCGCCACTGAAATATACAAGTTTCTCGCgagtttttatggttttttga
ttacctcaccaaaaaccaatAGTTTTGTATTGTTCCttggtgagttccac
tttgactaTTTTTCGACGTGGAGTAATGTCGACGTGGATTTTATTTTTCG
CTACTGCTTAGTCTACTATGTATGTATAGGCTAACTCTTAAATCAATTAA
ATGCAACTCAATTCAATTGAATAATATATATTTGCTTTATTTCCAGGAAA
TGGATGCCCACCAATGTTATATTTGGCGTGGTTTCTGTCATCACATGTAA
AAAATCCACGTTGGAAAAAACGAATTTACCAACTTGACTGGTTATTCAAA
AACGAATTTTTTCATCGCGATAAATGGTTCTACTTTGATATTTACGAAAC
AAAATACTTATATATAAACGGTAATAAACGAATAAAACGCTAGACTGGGA
TGGTAGTATTTCTAATGAGGAGTGTGCTGGTCCTACATTCATGTCATGCT
GCCATATATGGCCCCATATTTAGTTTGATTTTACTTAACAGACTtaacaa
agaaattaatttttcgggcttttcattaattagtggatgaattaattaat
taaattaattggct

Coding sequence (CDS) from alignment at sc0000159_pilon:70746..71659+

>MSTRG.16620.1.p1 ID=MSTRG.16620.1.p1|Name=MSTRG.16620.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=810bp|location=Sequence derived from alignment at sc0000159_pilon:70746..71659+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTGGAAGAAATGCTTTCCCACTTTCGAAAGCTAAAAGCATTGAC
AAAGAGTgaagtgaaaagaaaaagatcaaacatgttgaaagaatttgatg
gcgactgttttttcaaaattgcacTTTGGCCGAAgtttattcgaagaaaa
ttcttttcgAGTCCTTATGGCGATTGTGATACTTTGATTTTGTATCTGtt
tttttCAGGAAATGGATGCCCACCAATGTTATATTTGGCGTGGTTTCTGT
CATCACATGTAAAAAATCCACGTTGGAAAAAACGAATTTACCAACTTGAC
TGGTTATTCAAAAACGAATTTTTTCATCGCGATAAATGGTTCTACTTTGA
TATTTACGAAACAAAATACTTATATATAAACGGTAATAAACGAATAAAAC
GCTAGATGGAGTTGGAAGAAATGCTTTCCCACTTTCGAAAGCTAAAAGCA
TTGACAAAGAGTgaagtgaaaagaaaaagatcaaacatgttgaaagaatt
tgatggcgactgttttttcaaaattgcacTTTGGCCGAAgtttattcgaa
gaaaattcttttcgAGTCCTTATGGCGATTGTGATACTTTGATTTTGTAT
CTGtttttttCAGGAAATGGATGCCCACCAATGTTATATTTGGCGTGGTT
TCTGTCATCACATGTAAAAAATCCACGTTGGAAAAAACGAATTTACCAAC
TTGACTGGTTATTCAAAAACGAATTTTTTCATCGCGATAAATGGTTCTAC
TTTGATATTTACGAAACAAAATACTTATATATAAACGGTAATAAACGAAT
AAAACGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.16620MSTRG.16620Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16620.1.p1.exon1MSTRG.16620.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.16620.1.p1.exon2MSTRG.16620.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.16620.1.p1MSTRG.16620.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000159_pilongenomesc0000159_pilon:70746..71659 +