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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:25561..28801+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16615.1.p1 ID=MSTRG.16615.1.p1|Name=MSTRG.16615.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3241bp|location=Sequence derived from alignment at sc0000159_pilon:25561..28801+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTGTTTCAAATCAAACGCTActcagaaaaaatctttttaaaaaatctta
aaattcgtgaagatttattttagattttttaggtgtggtttattgaaaaa
tattggtaTATTGTAAGGTTTACACTGCGGTAATGGGTGCATCTTTGGTT
ACGCAAGCAGCCATGGCTTCACAGCCACATCAGAAAATTATACATGCCAC
cgcaaaagaaaagaaaaaactcacAATGGTAAATCATAGTTTGCTGGTTG
TGAAATTATCACACGTTTACTTCCAAGTTCAAACCTTTTTCACTCGCTAT
ACCATAGTAGCAAATGTTCTATTGTTTGACCAAGTTTTCGTGAaatatac
ccctgtgtcacagacccgctggaaagattgataaaaatttcgtccccggt
gggaaaataccttataatttcagccctacttggaaattaacttttatttc
atccccattcattTAAAAagtgcacttcaaaaccatcgcCACTGAATTTT
Ataaccttggaacaaaggaatttctatccccattaggatttcaataggaa
tttttatccccactgagaaaaaaagttctaccggggctgtgagacccctg
tgagataggggtgttGAAATTCTTAACGTTTTTACTCTGTTTAATCACTC
GACATCAccgaaaatctcttttttttttgttctacACCCCTGTCCCACTG
ATCCGGTGAGAATTTATGAGGCAGCGGGTATAGAAAATGAAGAAGCTAAA
GTTTGTTTCTAAAATCCGAAAATCTGCAGCATTTTTGgtctccgctgcag
attatataGTGAAAGCCTTTAAACAGTGATATTTTTAATGAATGttggtt
ttgaattttaatgttTAAAGCTGAAAGTTCAGTAAGTAgggattttgaaa
atgatagtaCTTCCCAGTGGGGATCAGAGTAGTTTCCCTATGGATAGATG
CATTTTCAGGGTGTTTTTTCACTGGAACGACATTTCAGCTGATTGTTTCA
TATGGAAAGGGGATTTACCCGGGTCTTTGACACGGGGGTGCTATGTTCAT
TTTTTGTGCGTACTGTAACTTAAATAtgtatatttgttagtattttagtt
tgtgtttgtgtgtgttttgtgttgACGATACAGATCAGGTAAGTGAACTT
TGACAGAACCATGCATGTTGTAAACTCCATCTACAAGAAGGTACGACGAT
AGGGTTAATTTATTCATTCTTCATCATTTATTATGGAACATATCAAGTTT
ATCAACCCTTTCATATTATTCATATTGCTGGAGGTTTATCGCGACTTGGA
TCACGATATTAAAGTTTGGCTACGTTTCAGAAGGTCTTAGTACAAATAGT
GGAGAAAACATCCTTCATATCActttgcccgatgatgggagaagataatc
tctcgaaacgtagccaaacgttaATCTTGTGATCCAATAGCCACAATAAA
CTTCCAATGTGCCTAACTACTAACTCTCGGAAGGGAATTCTATACACAAT
CTGCATCCcctaaaaaaaacatcaaaacatcaaaggGAATATGTGCAGCC
TAGCCTAAGGCCATGCGGGACAATGTTTTTTAAGGAActgattttttgtg
ttgtgttgattCCAGGTTCTATGTtggaattttttgtaaaatcgtataca
aacattaaaaaaatgaaaagaataattTCGCGTATTTTGCAGTTTAGGAC
CTCAAAATTCacatatacaaaaaaaaaactctttttggGTTTTGTCAGTT
GGGCAATTTGAAATAATGctcttatttatttgttttcttcATAAATTTCC
AGGAAGTATCTTGTGCCAGTTCACCAGAATATCGCTTCGATCAATTCATA
CTTTTATGTGAAGAATGTCAAAGAAGAAAACGGGTTATCGAGACAAAACT
CAAAGAAATGTTCGAAAAGATTCGCGCCACTTCAAATTTAGATCAACATA
TGAGTGCTGAacaaaaacattacgtcatgagtCTTATAAGCCGGTATCGA
CAAATACAAGAAGAACAAAACACTTTAATCGAACGTGAAAAAGTTCGATT
GCAAATGATGAAAAGTGAACTGGGAAGAAAGGAAGAAAGTGTACAGAAAA
TTCGGAATCGTCTGAAGTATGTGATCGCTTTGAATAAGGACCATGAAAAT
ATCATAACGCATATTCAACAAGAACGGAAACACTTTTCCGGAAATAATAA
TTCGACAATCACAAATGATTTAAGATTAAGGTAAGCATGTTAAAGTATTT
TAGAGAGGGAAATTGACTCTTCCATTATTCCAATGATCTATTTTCGAACA
TTTCATCCTCTGAACACGCGTTTTACCCCTGCACATATTccgagttttca
aaaaaaatatcaacctctgacCACCAAGTGTAGAagttttatcgcgcatg
tgtcaatctaacgactgtagaaaatcaaagatggagagcattaccatatt
aatgtttAGCAGACTGTATCGAAACAATAGAcagatctttatgttatgat
tctctatcgctGACTCTTAACCAAAGATCTTGGATTATTGTCATGGCTAC
TCCTCTCTGATGGTTGCGCGCTGAATATAATCGCGATTGGTCGACACAGG
TCAGAATATGTTACACCCTACGTGTACGGTTTTTATAGGCAGAGCCCAAT
TTGACCTTTGCAGCGACAGTCGTAATTTAACAAATCGTAGTTTATCAAAT
AGCTGTCAGTAAAATTACAAATTCGAGTTTGAGTAAAATTCCAATTTATT
TTCTTACCACaagtaaaaacaatttattttaagttttctttcaatatttA
GGTATCGTTCACCTGAAAGTGACGAACTTCGATTATAACGACAAAGACGT
TCAAGAATAAGGATTCTGAATCACAAACTCTCGTTTGCTCTGGAAGATTC
AAATCAGGTTCCTGGTTGTTTACGTTAAAAGACTTTGTCGGATTGGTGAT
CATTGTCTTGTTAAGGCATGGGACTTGTTTATTTCATTGACAAAGAGAGA
GTATTAAAAAaggatttaaaggttttatagCTTTGTATGGTCGAGATAAc
gttatattttatgttttcacgtggctcaaaatattttctgtaaAGACGGA
tggttattttttaattttttcggatttatttctagctatgatttttttaa
tgttttcattatATCTAAATATCTAATGAATGACTGTATTTATGATTTTC
TAACGGTTCTTGacgaattttctttgttttctttggcCATG Coding sequence (CDS) from alignment at sc0000159_pilon:25561..28801+ >MSTRG.16615.1.p1 ID=MSTRG.16615.1.p1|Name=MSTRG.16615.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1683bp|location=Sequence derived from alignment at sc0000159_pilon:25561..28801+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGCATCTTTGGTTACGCAAGCAGCCATGGCTTCACAGCCACATCA
GAAAATTATACATGCCACcgcaaaagaaaagaaaaaactcacAATGGAAG
TATCTTGTGCCAGTTCACCAGAATATCGCTTCGATCAATTCATACTTTTA
TGTGAAGAATGTCAAAGAAGAAAACGGGTTATCGAGACAAAACTCAAAGA
AATGTTCGAAAAGATTCGCGCCACTTCAAATTTAGATCAACATATGAGTG
CTGAacaaaaacattacgtcatgagtCTTATAAGCCGGTATCGACAAATA
CAAGAAGAACAAAACACTTTAATCGAACGTGAAAAAGTTCGATTGCAAAT
GATGAAAAGTGAACTGGGAAGAAAGGAAGAAAGTGTACAGAAAATTCGGA
ATCGTCTGAAGTATGTGATCGCTTTGAATAAGGACCATGAAAATATCATA
ACGCATATTCAACAAGAACGGAAACACTTTTCCGGAAATAATAATTCGAC
AATCACAAATGATTTAAGATTAAGGTATCGTTCACCTGAAAGTGACGAAC
TTCGATTATAAATGGGTGCATCTTTGGTTACGCAAGCAGCCATGGCTTCA
CAGCCACATCAGAAAATTATACATGCCACcgcaaaagaaaagaaaaaact
cacAATGGAAGTATCTTGTGCCAGTTCACCAGAATATCGCTTCGATCAAT
TCATACTTTTATGTGAAGAATGTCAAAGAAGAAAACGGGTTATCGAGACA
AAACTCAAAGAAATGTTCGAAAAGATTCGCGCCACTTCAAATTTAGATCA
ACATATGAGTGCTGAacaaaaacattacgtcatgagtCTTATAAGCCGGT
ATCGACAAATACAAGAAGAACAAAACACTTTAATCGAACGTGAAAAAGTT
CGATTGCAAATGATGAAAAGTGAACTGGGAAGAAAGGAAGAAAGTGTACA
GAAAATTCGGAATCGTCTGAAGTATGTGATCGCTTTGAATAAGGACCATG
AAAATATCATAACGCATATTCAACAAGAACGGAAACACTTTTCCGGAAAT
AATAATTCGACAATCACAAATGATTTAAGATTAAGGTATCGTTCACCTGA
AAGTGACGAACTTCGATTATAAATGGGTGCATCTTTGGTTACGCAAGCAG
CCATGGCTTCACAGCCACATCAGAAAATTATACATGCCACcgcaaaagaa
aagaaaaaactcacAATGGAAGTATCTTGTGCCAGTTCACCAGAATATCG
CTTCGATCAATTCATACTTTTATGTGAAGAATGTCAAAGAAGAAAACGGG
TTATCGAGACAAAACTCAAAGAAATGTTCGAAAAGATTCGCGCCACTTCA
AATTTAGATCAACATATGAGTGCTGAacaaaaacattacgtcatgagtCT
TATAAGCCGGTATCGACAAATACAAGAAGAACAAAACACTTTAATCGAAC
GTGAAAAAGTTCGATTGCAAATGATGAAAAGTGAACTGGGAAGAAAGGAA
GAAAGTGTACAGAAAATTCGGAATCGTCTGAAGTATGTGATCGCTTTGAA
TAAGGACCATGAAAATATCATAACGCATATTCAACAAGAACGGAAACACT
TTTCCGGAAATAATAATTCGACAATCACAAATGATTTAAGATTAAGGTAT
CGTTCACCTGAAAGTGACGAACTTCGATTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:25561..28801 + |
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