MSTRG.15770.1.p1 (mRNA) -

Overview
NameMSTRG.15770.1.p1
Unique NameMSTRG.15770.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000142_pilon:784784..790990-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15770.1.p1 ID=MSTRG.15770.1.p1|Name=MSTRG.15770.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6207bp|location=Sequence derived from alignment at sc0000142_pilon:784784..790990- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTGTTCTAAATTTGTATAAAATTCAAGTTATCTCCTTTCTCGAATTAA
TTAACGTTTGAATGCAGCAGTAGTTTTAAAGTGAAGAAAGCGATCTTTGT
TACCAAGTAGAAGGCGTAAAAAGTAGAATCTGCCATTCTTCAATCAATTG
GGACACGATTTGGTTATGATGCATAATATTACCTTAAACTCCAATTCTTC
AAGGTAGGCACACAACGTTGTTTCAACATACATCTAACGTTTTATGAACG
TTAAGAGCATCAGATAGACGTTGTTATGACGTTCGGTACCAGCTGGCTGG
GAGACTGCTTTTTTATTTACTGAATTACCTTCCATGTCCCCGACCAACGA
TGTGTTAAAATGCTCTTTTGAATACTACTTACTGGGTTTATTTCACTGAC
CTTTATATATCCCTGGACCAATCTATATCCACCATCTTTGATCGAATTTT
TCTTTGGAATTAGTACCCGAGTCGGTGGTTTATTTGGGCAAAAATGGGTA
CGGGGATGTGCAGCTGGTCAGGGTAACTTTTTCACTTCCATGAGTTCCAA
GTAGGTTCGAAAAACAAAAACATATTAAGATTGGTCCCTGGTATAGGGTA
CCTTTTTGGGGATAATTTTGGAAAAACTGGAATACCCATTCAGGGTCACT
TTTTCACCAATTTTGGCGAAATTGTCAAAAAAAAAAACGAACCCTGAACT
TAACTGAAATATATGGTTTTGAGATATTTTCTAGCAATTGTAATGCCGAG
CCCGATGCTCTACCACTCTACAAATTCTACTTGATCAAGCAACAGATTTT
GCAGAAGAGGTCAATATACCCAGCCCTCATTTAGGGGGGGGTATTTTCTG
GTTCAATGGGTTTAGCATAATTTTGTTCAGGTTGACACGATAGATAGACG
ATAAATAAGCTGTTTTTATACATAAAGCTGTCTCATTTCTATAAAAGATT
TTTATTTTCATTGACTTCAAGAGCATCAATAGGAACATTTACTGCCGATG
GAAAAATACGCATCCAGACTCACATCCAAAGGTTCTAAAAAACGTGTAAA
TTGATCTCGAATAAAAGGGGGGGGACAATTTACCAACAGGCAATTTTCCT
TGGGGCGGGGGGCATGAGAAAGGAGGGAAATTTCCGGGGGCAAATTTCTT
AGAACCGAAAATAACGTAACGGATTATATGAATAAAAATACTTACATTTT
TAAAGCTGGTCGGTAAATTTGTGATGAAATCTTTCTCTATTTACTGTACT
AGCCTATTTCATTGGAACTTTGTTTTAAGAGTATGTAATTTTCTTCTACG
TCACTGCAGTAATCAACTTTTTATGGTTGAACGCTCTTTTGTGAATTGAC
ATTATAAGTTTTACAAAGGCAACAACAATAGCAAAGAGAGCAAAGAGCAT
TTTCCCTTAGAAAAATACACAAGGAATTAAGGCCGGTCTGCACTTGCGCG
CGCTTCAATCGGACTTTTTCGATTAATACTTTCACACTATTGGTCAAAAG
AAAAATCAAGCAACTCCATTGGCGCGATCTGACGTAACGGTTGAAAAAAG
TTGAAATGTGTTCAACTTTTTTTTTGAGCACGCGCCACATTTTTATGACG
TAATCTTTTTTCCAAGCAAAAAGATTGAAGCCAAAAGGTGCGATCACAGC
GAGCGCAAGTGGAGATCGGCCTTAAGGGAGTTGTATAATAAGAGCAAAGA
TTTATTATACACTGGATAAATGACTCATAAAACGGCGGAGAGCAATCATT
GTATTTCCTTTGTTTCAGAAAACAATTGATGTTTTAGCTTTGTCCGCAAA
GGACAACTGTCATGGCGGCTCGAAGATGTCTGATTTCTAAAATAGTTTAA
TAATCTTATTTAAAAAAAGCTCTCTAGCTCTTTCTTTTTGTACATTTGCG
GAAAAAAAAGTTTGAAAGTAAGGCTAGCATACCGAGCTAGATACATTTGT
GAAATCGGGTGTGAGAAAATCATCATTAGACAAGAAATTCAGTCAGACAA
AATGCTTATAGTGACACGAAATTTTCAATTGGAAATTATCTTTCCAAAAC
TATTCCCAGAAGAGCTGAAATTAACAAACATAAGAATTGAGTGTCTTGGC
TCCACTGTGGTATGAAAATCTTTTGAAGGCACGTGGTGGCAAGGGGGCTT
TTTTGAAGTTGAAGTTTGAACATTTACGGTGTCAACATTCAATTTCTTAT
ACACAACACGTCTTTTGCATCCCTCTCGCAACTTGAAACGTCATAACGAC
TTATAACTAGCAATAGCATACCGCAGTGAATCTAAAAATAGACATTGATT
TTTCTGTTTGACCGAAATTCAATCCCATCACCCTTCGCGTTAACTACGCC
TGCATGCAAATTACACTCAACTACAAAGAAAAAGTAATGACTTTCACGAC
TTTTTAATTAAGACGAAAAGGATTGTGGGATTGATTTTCGGTCAAGTGTT
AAAAGTAATAATTATGACGTTTGCATAACGGTGTGCTATTAAGTAGAAGA
ATCTGATTCTCACAGGGAAGTTTTAAGTTTCTTTTGGAAATTGGATGAGT
GATTTTCGATAAGAAATGCAATAAAAATGCTTCGAAAAATCATTTAATGA
GGGAAGGAGGGTGAACAATAACATCATTACTGTGGACATGGCTTAGAACA
TGAGAAATCGGCAAAAATCTGTTACTTGTATATCTAGTGTATAAATCCTT
GATAAGAGGTCTTTATAAAAAAATATACGGGTGGACTGTAAGCTTGGAGT
GTGATTTTTTTCGTGCCTTGCGTGCCTTCGTGCCCTTCGTGCCTTTCAAA
AAAAAGTTCATGCCTTTGAAAAAATATTTCGTGCCTTCGAAAAACAAGTT
CGTGCCTTTTGAGAAAAAGTTCGTACATTTCGAAAAAAAGTACGTGCCTT
TCGAAAAAAAGTTCGTGCCTTTCGAAAAAGTTCGTGCCTTTTGAAAATAG
TTGGTATGATGACAAACAAAATAACCAGAAGATTCATTTTGAGTTATTTC
ATTCCATCTTGACTCATATTGAGTTACCTTCTTCCTTGTAACACCCCTGT
TTCAGTGACCCGGTGGAGTTTACTTGAGTTTAAAAATCCACCGGGGTGTT
TCTGAACGAAATGAATTTTAACCAAACCCAATTTGTAAAATTCAAAACAT
CATCCTCATCATCATCGTCATTGCTCGACCACGCTCGAGACAATGGATTC
GACTCTAGCTCGCCAGCTATCACGGTCTTTCATGGCGATCTCAAGATCAC
TGAATTTGAGCCCGGTATCCCTGCAGATGGTGTCAGGGAATGTCAGGGAA
TGTCAGGGAATGTCAGTTTTCTTGATCTTTGAGAAATCAACTTTGGTTTC
CACAACAGAAGGGTTAAAATCACTTCAGATGATGCACGAAGACAGTGTCC
CGCAAACTGTGTCCGTCTAGATCTTAAGAGTGCTGAGACATGTTTCAGAG
GTCATTAAATAATTTTCCTAGTGGGATGGTCCCTCCAGAAAAGATGTTTA
ACTCTTCTTAGAAGTCTAGTATATGTACCGTCAAGCTGTCTTTTCAACTG
TTTGGTTAAAGACCAAGTTTCTGAGCCATAAAGGAAGATAGGTTCAATGG
CTGTTCGGAACACTTTGACCTTGATATTAGATTTTAAAAGAGAAGATGAC
CAGATCTTGTTGAGTTTATTTCTTATCGGAAGATGAAATGTAAGAACCGA
ATTATTTGTAGTCATTGACTTTTTCAAAGGAAATTCTGAGACAGTTTTAA
CTGAATTTATGGGTTCGTGCTCGTTGATAGTGAGGTAATCAGTTTTAGAT
TATTAAGATAAAGGCCAATAAAATTCAAAACAGTCACCAGGGTGAAAAAT
TTCACCTCAATTTTCACCGGGTTGAGGACAAAATTTGGACTTTCAAGAAT
TAGCGAACATTATTTCGACCTTATTTGAATGCGCCACGCTTTAGCGCCAC
AAGCGTAAATTTTTCCAAACGAACTATTTCCAAGGTATTTTCAAAAGGCA
CTAAGTTTCTTTCGATAGACACTATTTTTCGAAAAACATGAACTTTTTTT
TGAAAGGCACGAACTTTCTTTCGAAAGACACGAAATTGTTTTTCAAAGGC
ACGAACTTTTTTCAAAAGGCACGAACTTTTTTTCAAAGGCACGAACTATT
TTTCAAAAGGCACGAACATTATTTCAAAAGGCACGAAGGGCACGGAGGCA
CGCAAGGCACGAAAAAAATCACACTCGTAAGCTTGAATCATCCATATATA
GAATGAGTCACATATATCATTACAGATTACAGAAACAAACTAAAAGAATG
ATTCCGGAAAAAAGGGCAATTTTAGGCCGGTCTGTAAGATACATAATACC
GACAGGTGGGTAAAAAATCAATCCTGTACCTCAAACAAATATCAACCCTT
CAAACCCGAGTGGCGTGTATACACGTTCTAAATTTATCTATATACCAAGT
GCCAGAATTATGGCTGAACACTTGGTTTAAGAGGGCATAATCTGAGCTCT
TAAAAAGAGTATAAAAATACCTTTCCAATGGAACCAAAACCATTGACTCT
CAAGATACAAGCTTTTATACCAGTGTGAAATTTTGACATAAAAAAAGAAG
CTGGAAATTGCTGTTGCCCTTGTTGCTCTAAATGTTACCCTCGAGTATTT
CGACATCTTGTAATGATTTGCTTTATATTTTTTGATTACAGTTGGTGCGT
TGAACTTCCAACAAGAAGTGGCGGAACAACTTCTTTCTGTAACATCACTG
AAGAATGGGTACCGCGTTTCACCAGTGAGGCAGTTTACATCGTCCCTCCC
ACATTGAGTTTATTTTTCTTAATCCTGTTCATTGTGTTTAAGATAACATG
TGTCGAGGCATGTGGTGGTTTAAAAGTGGGTGATTTTATTAAAGATGCTT
TCAGTTGGAAATGGTATTGCGGGGAAAAACTGAGTGACAAAGACAAAGAG
ATCGTAAACAAGTATAGATACGGTGACGATGACACATCAATTAAATTGTT
ACCTGCAAATGTACAGAGCAACCAAGAAACAATGATACCACCATTGAATT
CGATTCACGACCTAACTGAAGACGAGAAAAAACATTTACACTGGGTCAGA
AACCGTGATAACCCAGCCCGGGTAGAATTTGGTTGCTGTGACAAATGTTG
TGGAACGTGCTTTACAGTGGATACTGGAGTTCATTTTACTATTCTACTAG
CACTCGGAGGCATTCTTTACGATATCTATGACGTTTATACTGATTGTGAA
TATCATTACAAGTATGAAAATTTCGGACAAGTTCACCGAGGGATTTATCG
GGATGGTGCAGTTTCCGTCTCTATTTTGGTGTTTGCTATTTTTGGTATGG
CCAAAGTGATCCTGACATCTATCTACGTCATCTGTGCACATCTTGATAAT
AAATTAAGATTAGGTACTTACAATGTCTTAACAAGTTTTAAATATTTTGA
TAACGTGATACTTTTTATTGTAGAGGACTGTGCTGAGAATTTCCTGAATT
ATTTCTATATTGAAAAATATTCCCTTGGTGAAGCTATCTCGCATACCATG
ATTTCTAAGATCTTCATTAATTTCCTCAAGTATGGCTACAAATTTTACAA
AGGTATGAAAAAATCGTGCAAGGAGTGGAAGAATTTGAAGGAAACAGAGG
ATAACAGGGAGGTTTTTAGCTATTTTATTTATGAAGTTGACCCGACCCTG
AGTGGACGCTATAACCAACTGATATTAGATATGCACTTAAGGATTTTGTT
TGTGCATATTCCATCGATTTTCATGTGCGCTGGCAACTTTCTTCGCTTAT
TTGGTGTGTTTTATCAAAGCCACTATGGTAAACTGGATGACCACTGTGTA
GCTGTCGTCAACGGTCGTCTGATACAGACACCGTTCACTAGTTACCCTGG
AAACTGTATGAGGAGATGGGAGTATATTTTTATGGTCTGCAATTTCGCTC
CGTTGCTGTTTTATATTTTGGGTTTAATCCGGATTATATATCAGTATATT
AAACAAATTATTCACCAAAAATAAAAGTTTATTTTAGAATTTTTAAGGTT
TTCAACTCGCTCGCTCGCCAGATTTTGGTAGTGAGCCACGGGTTGACGTA
GATCTTATTTATCCATCCGTATCAGCAAGGAATTGCTATTATAACTGAAT
GAAAAATTCCAGCATATTTACGTGCCCTCTATAATTTTGGAACTTTGTAT
GTTTAAG

Coding sequence (CDS) from alignment at sc0000142_pilon:784784..790990-

>MSTRG.15770.1.p1 ID=MSTRG.15770.1.p1|Name=MSTRG.15770.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2742bp|location=Sequence derived from alignment at sc0000142_pilon:784784..790990- (Clytia hemisphaerica_ch_hm2_pilon)
TTGGTGCGTTGAACTTCCAACAAGAAGTGGCGGAACAACTTCTTTCTGTA
ACATCACTGAAGAATGGGTACCGCGTTTCACCAGTGAGGCAGTTTACATC
GTCCCTCCCACATTGAGTTTATTTTTCTTAATCCTGTTCATTGTGTTTAA
GATAACATGTGTCGAGGCATGTGGTGGTTTAAAAGTGGGTGATTTTATTA
AAGATGCTTTCAGTTGGAAATGGTATTGCGGGGAAAAACTGAGTGACAAA
GACAAAGAGATCGTAAACAAGTATAGATACGGTGACGATGACACATCAAT
TAAATTGTTACCTGCAAATGTACAGAGCAACCAAGAAACAATGATACCAC
CATTGAATTCGATTCACGACCTAACTGAAGACGAGAAAAAACATTTACAC
TGGGTCAGAAACCGTGATAACCCAGCCCGGGTAGAATTTGGTTGCTGTGA
CAAATGTTGTGGAACGTGCTTTACAGTGGATACTGGAGTTCATTTTACTA
TTCTACTAGCACTCGGAGGCATTCTTTACGATATCTATGACGTTTATACT
GATTGTGAATATCATTACAAGTATGAAAATTTCGGACAAGTTCACCGAGG
GATTTATCGGGATGGTGCAGTTTCCGTCTCTATTTTGGTGTTTGCTATTT
TTGGTATGGCCAAAGTGATCCTGACATCTATCTACGTCATCTGTGCACAT
CTTGATAATAAATTAAGATTAGGTACTTACAATGTCTTAACAAGTTTTAA
ATATTTTGATAACGTGATACTTTTTATTGTAGAGGACTGTGCTGAGAATT
TCCTGAATTATTTCTATATTGAAAAATATTCCCTTGGTGAAGCTATCTCG
CATACCATGATTTCTAAGATCTTCATTAATTTCCTCAAGTATGGCTACAA
ATTTTACAAAGGTATGAAAAAATCGTGCAAGGAGTGGAAGAATTTGAAGG
AAACAGAGGATAACAGGGAGGTTTTTAGCTATTTTATTTATGAAGTTGAC
CCGACCCTGAGTGGACGCTATAACCAACTGATATTAGATATGCACTTAAG
GATTTTGTTTGTGCATATTCCATCGATTTTCATGTGCGCTGGCAACTTTC
TTCGCTTATTTGGTGTGTTTTATCAAAGCCACTATGGTAAACTGGATGAC
CACTGTGTAGCTGTCGTCAACGGTCGTCTGATACAGACACCGTTCACTAG
TTACCCTGGAAACTGTATGAGGAGATGGGAGTATATTTTTATGGTCTGCA
ATTTCGCTCCGTTGCTGTTTTATATTTTGGGTTTAATCCGGATTATATAT
CAGTATATTAAACAAATTATTCACCAAAAATAAATGATGCATAATATTAC
CTTAAACTCCAATTCTTCAAGTTGGTGCGTTGAACTTCCAACAAGAAGTG
GCGGAACAACTTCTTTCTGTAACATCACTGAAGAATGGGTACCGCGTTTC
ACCAGTGAGGCAGTTTACATCGTCCCTCCCACATTGAGTTTATTTTTCTT
AATCCTGTTCATTGTGTTTAAGATAACATGTGTCGAGGCATGTGGTGGTT
TAAAAGTGGGTGATTTTATTAAAGATGCTTTCAGTTGGAAATGGTATTGC
GGGGAAAAACTGAGTGACAAAGACAAAGAGATCGTAAACAAGTATAGATA
CGGTGACGATGACACATCAATTAAATTGTTACCTGCAAATGTACAGAGCA
ACCAAGAAACAATGATACCACCATTGAATTCGATTCACGACCTAACTGAA
GACGAGAAAAAACATTTACACTGGGTCAGAAACCGTGATAACCCAGCCCG
GGTAGAATTTGGTTGCTGTGACAAATGTTGTGGAACGTGCTTTACAGTGG
ATACTGGAGTTCATTTTACTATTCTACTAGCACTCGGAGGCATTCTTTAC
GATATCTATGACGTTTATACTGATTGTGAATATCATTACAAGTATGAAAA
TTTCGGACAAGTTCACCGAGGGATTTATCGGGATGGTGCAGTTTCCGTCT
CTATTTTGGTGTTTGCTATTTTTGGTATGGCCAAAGTGATCCTGACATCT
ATCTACGTCATCTGTGCACATCTTGATAATAAATTAAGATTAGGTACTTA
CAATGTCTTAACAAGTTTTAAATATTTTGATAACGTGATACTTTTTATTG
TAGAGGACTGTGCTGAGAATTTCCTGAATTATTTCTATATTGAAAAATAT
TCCCTTGGTGAAGCTATCTCGCATACCATGATTTCTAAGATCTTCATTAA
TTTCCTCAAGTATGGCTACAAATTTTACAAAGGTATGAAAAAATCGTGCA
AGGAGTGGAAGAATTTGAAGGAAACAGAGGATAACAGGGAGGTTTTTAGC
TATTTTATTTATGAAGTTGACCCGACCCTGAGTGGACGCTATAACCAACT
GATATTAGATATGCACTTAAGGATTTTGTTTGTGCATATTCCATCGATTT
TCATGTGCGCTGGCAACTTTCTTCGCTTATTTGGTGTGTTTTATCAAAGC
CACTATGGTAAACTGGATGACCACTGTGTAGCTGTCGTCAACGGTCGTCT
GATACAGACACCGTTCACTAGTTACCCTGGAAACTGTATGAGGAGATGGG
AGTATATTTTTATGGTCTGCAATTTCGCTCCGTTGCTGTTTTATATTTTG
GGTTTAATCCGGATTATATATCAGTATATTAAACAAATTATTCACCAAAA
ATAAATGATGCATAATATTACCTTAAACTCCAATTCTTCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15770MSTRG.15770Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15770.1.p1.exon2MSTRG.15770.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15770.1.p1.exon1MSTRG.15770.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15770.1.p1MSTRG.15770.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000142_pilongenomesc0000142_pilon:784784..790990 -