MSTRG.15427.1.p1 (mRNA) -

Overview
NameMSTRG.15427.1.p1
Unique NameMSTRG.15427.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000136_pilon:270623..272424-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15427.1.p1 ID=MSTRG.15427.1.p1|Name=MSTRG.15427.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1802bp|location=Sequence derived from alignment at sc0000136_pilon:270623..272424- (Clytia hemisphaerica_ch_hm2_pilon)
TTCAGCCCCACGCATCCCCACTTGAAATTCAATATCTAAAATTTGCACTC
CAAAACCACAACGTCACTGATTTTTTAACCTTTGAATTGCTATCCGCATT
GGAATTTATATAGGGATTTTTATCCCCACTGAGGAAAAAAGTTCCAATGG
GGTTGTGAGACAGGGATGTCTTGTTTGACCTGAAGTTTTACCAATGTTAT
TTTGCATTTCTTTTTGACAGAACTAAACATGAATTTAACATCAATGGATT
TACACAACAAATCAGTTTCATCAATGTTATCATTTTCTCCACAAATGAAG
ACAATGAAGACCTCGTGGAATTCATCTACCACATCCATGACACTCACAAC
TTTCCAACCAATCAACAACAATGAATGCTATCGTATATTCAACGAAGATA
GTTTCAATAATTTGAATAGAAAACTGTTACTATCATTCTTGATTTTTGCA
TTTTGTTTTATAAACGCATCGAATATTATGCTGATTCATGGTTTAAGACG
GACTAACCGGACATTCAGCACGACAACAAAATTGTTCATCTTCTTATCCA
GCAGTGATTTAGTAACAGGGCTTATTACTTGTCCAATGCAAGTTATAATG
CTTTCTTTAGGTGTACAATCAACATGTCTCCAAGTTGGTATCCAAGCTTT
CTTTAACGCCTTCACACCACTACTATCAATGTTCACTTTATTAACAATGT
CTATACTAAGATGTATTTCAATGCAGAGACCATTAAAACGAACTAAAGAG
CAACATGTCTGGATGTGGCTAATGTGTCAAGTTGTTATTGCATTGATTTT
AACAATATGGTATGTGGATATCTCACAAAAGTCAAACACTACTCAAAGTC
TTGGTATATTTCTAATAGTGGTAACAGCTTTATGTGTCTTGGTGAATGGA
GCTTCAGTAGTCATCAATACATTCTTACACTTCAGTCTTTCAAAGAATAA
ACCGATACGCAAGAACTCGACAGTAACCAGAGCTAAACAACAAAAAGGTG
CAACAAATACTCTATTGATATTGTCTATTATTTTGGTGTTATGTTATTTC
CCTAACGGTGTAGCGTTTGGGGTAATAGGTTATCACATTCTTGGCCGTAA
CACTGTAAAGACTGTTTATCGGGATTACGTACCTTGGGCCCATATTCCAA
TGGTATTAAACGCTGGCATCAACTCCTTTGTTTACATTATAAGGAATAGA
AGAATAAAACAGTATTATAAAGATGTGTTTCTTTGTCGACTTCAAACGAG
TAGATATCGACGAGAATCGATGTTCTCGATGCAATCGCTGAACAACAATA
ATAATAACAACAATGACATTTGATGAGCTGGACACCCCCTTCTCACAGAC
CCACTGGAAATCCTTCCCACTGGAAAGTTTAGCCAAAAATATCGTCCCCA
GTGGAAAATTATCCTCCAATATCCTCGATATTTTTCCCATTCCCACTGGA
TTTTCTGTCTTGAAAACAAAATAATTTAAATCCCCGGTCATAAAGAATAT
GGGAATATGAACCTCCCCATCGAGTTTCGGTCCGTTATTTTTACCCGCAC
TGGTTGAAAAGATCCTACCTGTCTGTGAGAAGAGGATGAGTTGTTTTTTT
CTATTTTTTCTCGCTGTTTGTTTTTATCCTAAATTAGTTGCTTTGAAAAA
AGAATTTTAGATGATAATTGATTTTAAAAGAGTGCGATTTTTAGGGTGTT
ATAAGTGGTATTTAAGGACTGGATCTTTAGAGAGACAAATATGGTACTAT
AACAATCGATTTCTGATTGAGAATTTACTAAAATCTATCTGTATTTGAAT
TG

Coding sequence (CDS) from alignment at sc0000136_pilon:270623..272424-

>MSTRG.15427.1.p1 ID=MSTRG.15427.1.p1|Name=MSTRG.15427.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1095bp|location=Sequence derived from alignment at sc0000136_pilon:270623..272424- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTTAACATCAATGGATTTACACAACAAATCAGTTTCATCAATGTT
ATCATTTTCTCCACAAATGAAGACAATGAAGACCTCGTGGAATTCATCTA
CCACATCCATGACACTCACAACTTTCCAACCAATCAACAACAATGAATGC
TATCGTATATTCAACGAAGATAGTTTCAATAATTTGAATAGAAAACTGTT
ACTATCATTCTTGATTTTTGCATTTTGTTTTATAAACGCATCGAATATTA
TGCTGATTCATGGTTTAAGACGGACTAACCGGACATTCAGCACGACAACA
AAATTGTTCATCTTCTTATCCAGCAGTGATTTAGTAACAGGGCTTATTAC
TTGTCCAATGCAAGTTATAATGCTTTCTTTAGGTGTACAATCAACATGTC
TCCAAGTTGGTATCCAAGCTTTCTTTAACGCCTTCACACCACTACTATCA
ATGTTCACTTTATTAACAATGTCTATACTAAGATGTATTTCAATGCAGAG
ACCATTAAAACGAACTAAAGAGCAACATGTCTGGATGTGGCTAATGTGTC
AAGTTGTTATTGCATTGATTTTAACAATATGGTATGTGGATATCTCACAA
AAGTCAAACACTACTCAAAGTCTTGGTATATTTCTAATAGTGGTAACAGC
TTTATGTGTCTTGGTGAATGGAGCTTCAGTAGTCATCAATACATTCTTAC
ACTTCAGTCTTTCAAAGAATAAACCGATACGCAAGAACTCGACAGTAACC
AGAGCTAAACAACAAAAAGGTGCAACAAATACTCTATTGATATTGTCTAT
TATTTTGGTGTTATGTTATTTCCCTAACGGTGTAGCGTTTGGGGTAATAG
GTTATCACATTCTTGGCCGTAACACTGTAAAGACTGTTTATCGGGATTAC
GTACCTTGGGCCCATATTCCAATGGTATTAAACGCTGGCATCAACTCCTT
TGTTTACATTATAAGGAATAGAAGAATAAAACAGTATTATAAAGATGTGT
TTCTTTGTCGACTTCAAACGAGTAGATATCGACGAGAATCGATGTTCTCG
ATGCAATCGCTGAACAACAATAATAATAACAACAATGACATTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15427MSTRG.15427Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15427.1.p1.exon1MSTRG.15427.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15427.1.p1MSTRG.15427.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000136_pilongenomesc0000136_pilon:270623..272424 -