MSTRG.15421.3.p1 (mRNA) -

Overview
NameMSTRG.15421.3.p1
Unique NameMSTRG.15421.3.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000136_pilon:232576..233588+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15421.3.p1 ID=MSTRG.15421.3.p1|Name=MSTRG.15421.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1013bp|location=Sequence derived from alignment at sc0000136_pilon:232576..233588+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTTTATTGATAAAGgaaattgaatatttcataacacttttcaaagattt
tcgaataaatAGACGTAGAAAGGTGGTGAAAATCATCATCTCAGATCTTA
AAGTAATCTCAGAAGAACAAACAAACATGAAGGTCATCATTTTCACCGCT
TTCTTGGCTGGTAAGTACTTCTAACTACTTCAAGAAAAGAAATTCGCTGT
ATAGAAGTATTGATTTTTAAGAGCAACCATCCTTAATTTATTAATTAATT
TCTCACATAACTGAATTTCCAAGGttgatattttctaaatttaatgGTAT
AATTCATCTAAATATTTAATTCATCTAAATCTTTCAGTTGCCGCCGCCCT
CGAGGTTGGAACCCAAACTGGTACCACACCACCAGCTGTCCCATGCCCAG
ACTCCCTCTGCAAAGGAAGAGCTGACGGAAACTACGAATACTACTACTAC
AGCCGATACAACCCACACTACTTCCTCCAATGCTCCAACGGATTAGCTTA
CTGTCAAGCTTGCTGGCCATTGTCCTTGGAATTCAGCGAACCATGTAACC
AATGTTTATACAACCGAAAAGACGAATGTGTCACCACACAACCATGGGAA
CCAGCAACCACCTTCGAATGCCCAGACAAATGCCCAGCCCGTGGACCACA
CTTCAGCGGAAACATTGAAGATGACCACAACCCACACCAATACGTCGCTT
GCTTCCACGGACAAACTGTCGGATGTATCGCCTGCCCAAAAGGATTACAA
TTCAACGAGAAATGGAACGCTTGTTTGTACCAAGGAAAATACAAGACCGA
ACCAGAATCCCCACCAAAACActaaattattttcagtttttttaagtaAA
AGCGAAATTCTTTCTCTTCATCTTTTTTCCATCCTTTCATCTACACTCGC
TagattttcaacacttttccTAAACTTCCTATTTTCttaatatatatatt
ttgtaaTGTATATAAATCGTTGAACTATTTATATCTTATGAAATACCTGT
GATCCCAACTCGA

Coding sequence (CDS) from alignment at sc0000136_pilon:232576..233588+

>MSTRG.15421.3.p1 ID=MSTRG.15421.3.p1|Name=MSTRG.15421.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1296bp|location=Sequence derived from alignment at sc0000136_pilon:232576..233588+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTTTATTGATAAAGgaaattgaatatttcataacacttttcaaagattt
tcgaataaatAGACGTAGAAAGGTGGTGAAAATCATCATCTCAGATCTTA
AAGTAATCTCAGAAGAACAAACAAACATGAAGGTCATCATTTTCACCGCT
TTCTTGGCTGTTGCCGCCGCCCTCGAGGTTGGAACCCAAACTGGTACCAC
ACCACCAGCTGTCCCATGCCCAGACTCCCTCTGCAAAGGAAGAGCTGACG
GAAACTACGAATACTACTACTACAGCCGATACAACCCACACTACTTCCTC
CAATGCTCCAACGGATTAGCTTACTGTCAAGCTTGCTGGCCATTGTCCTT
GGAATTCAGCGAACCATGTAACCAATGTTTATACAACCGAAAAGACGAAT
GTGTCACCACACAACCATGGGAACCAGCAACCACCTTCGAATGCCCAGAC
AAATGCCCAGCCCGTGGACCACACTTCAGCGGAAACATTGAAGATGACCA
CAACCCACACCAATACGTCGCTTGCTTCCACGGACAAACTGTCGGATGTA
TCGCCTGCCCAAAAGGATTACAATTCAACGAGAAATGGAACGCTTGTTTG
TACCAAGGAAAATACAAGACCGAACCAGAATCCCCACCAAAACActaaTG
TTTATTGATAAAGgaaattgaatatttcataacacttttcaaagattttc
gaataaatAGACGTAGAAAGGTGGTGAAAATCATCATCTCAGATCTTAAA
GTAATCTCAGAAGAACAAACAAACATGAAGGTCATCATTTTCACCGCTTT
CTTGGCTGTTGCCGCCGCCCTCGAGGTTGGAACCCAAACTGGTACCACAC
CACCAGCTGTCCCATGCCCAGACTCCCTCTGCAAAGGAAGAGCTGACGGA
AACTACGAATACTACTACTACAGCCGATACAACCCACACTACTTCCTCCA
ATGCTCCAACGGATTAGCTTACTGTCAAGCTTGCTGGCCATTGTCCTTGG
AATTCAGCGAACCATGTAACCAATGTTTATACAACCGAAAAGACGAATGT
GTCACCACACAACCATGGGAACCAGCAACCACCTTCGAATGCCCAGACAA
ATGCCCAGCCCGTGGACCACACTTCAGCGGAAACATTGAAGATGACCACA
ACCCACACCAATACGTCGCTTGCTTCCACGGACAAACTGTCGGATGTATC
GCCTGCCCAAAAGGATTACAATTCAACGAGAAATGGAACGCTTGTTTGTA
CCAAGGAAAATACAAGACCGAACCAGAATCCCCACCAAAACActaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15421MSTRG.15421Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15421.3.p1.exon1MSTRG.15421.3.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15421.3.p1.exon2MSTRG.15421.3.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15421.3.p1MSTRG.15421.3.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000136_pilongenomesc0000136_pilon:232576..233588 +