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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1571812..1573930+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1542.1.p1 ID=MSTRG.1542.1.p1|Name=MSTRG.1542.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2119bp|location=Sequence derived from alignment at sc0000007_pilon:1571812..1573930+ (Clytia hemisphaerica_ch_hm2_pilon)
TATGGCCAATATGGTAGTTTCACAAGCTGAATATGTTCGAATTTGCTACT
ACACGAATTGGTCACAATATCGTCCAGGAAAAGCCAAGTTTTCACCATCA
CACATCGATCCTTTTCTTTGCACACATATCGTCTATGCTTTTGCAAAGAT
CGTCGAACATCGTTTGGAACCTTATGAATGGAATGATGATGAATATGCAA
ATTATTacaaacaaatcatTAATTTAAAGAACAAAAATCCAGCATTGAAG
ATTCTACTTGCTGTTGGTGGATGGAATCACGAATCTCAAGGAAGTCCTTT
CTCCGAAATGGTAAAGACACGCTCAAACAGACAAGGATTCATTCAACAAA
GTATCCGGTTCCTCAGACAACGAGGTTTCGATGGATTGGATTTAGATTGG
GAATATCCAGCCAGTAGAACATCTCCATTATCTGACAAACAAAGATTCAC
AGTTCTTTGCAAAGAACTTCAACAAGCCTTCGACCAAGAAGCTCGATCTT
CTGGCAAAGAAAGATTAATGCTGACAGCAGCCGTAGCAGCAGGAAAGGCA
ACCATCCAAAGAGCTTACGAAGTTTCAAAACTCGGCCAATCTTTGGATAT
GTTGCATTTGATGAGTTACGACCTTGCAGGAGCTTGGGATGGTAAAACTG
GTCACCACACATCAATGGATGCTAACAGGAAATGGTCCGTTCCCGTTGGA
TTAGATACATGGATTAACGGTGGATTTCCAGCTAATAAGGTAGGTGAAGA
TTCAGATTTAGATTAGGCTTAAACAAAGCGAAGGTTTCAATACTAAAGAA
CTGAAATCCACAATTTGCTAATTCTCGGTTTTACTGGATAATAAATGTTT
TTTCCcatattaaaaaacaaaaaaactaaacgaACCATATTTCCTTTAAT
ATTATCTTTAGATTGCGTTGGGTTTGGGAACATACGGCAGATCATTCACA
TTGACTTCAAAGTCCAAATCAAAGATGGGAGAAAAATGTAAAGGAGCTGG
AGCAAGTGGTCCTTCCACCAGAGAAAGTGGATTTCTCTCTTATTACGAAA
TTTGCGACAAAATTAAATCTGGAATGAAAGTAGTTCAACATCCTAAAGCA
ATGGCACCATATGGTCACAAAGACAATTATTGGGTTGGTTATGATGACAT
TGAAAGTTTGAGATATAAAGTCAAGAAACTGATCAAAGGACGCGGATTAA
AAGGAGCCATGTTTTGGTCACTTgatttggatgacttttctggaGCTCAT
TGTAACCAAGGAAAATTCCCTTTGCTGAATGCTGTAAAGAAAGAACTTGG
TGCACAAGGAACAGTTACTTCAATCATCTCCAAATCAGCTCACATCAAAA
CCAAACCAAAGATTGGCGAGAAGTTATTGAAGAGCACCCGAACAACCACC
ACAACAACAAAAGCACCAATGAAATCAGCATCAAACAAAAAACGATGTTT
TGCAGCCAACGTGTGGCTTGGTCATGCTGCAATGGATCAATGGTGCATTC
GAAACTGTGCCGACGGAAACTGTGATCCTCGCTTTTGTTCCTGTGAAGAA
ACATCAATGAAATTATCTacgacaacgaccactcaaccgacaacaacgac
cactcaaccgacaacaacgaccactccatatacaacaacgaccaccaaGC
CTACGACAATGGCCATCCGACAAACCACTACTACCATCAGGCCAACAACT
AccacaaaaccaaaaaaaatgataattcGACCAATAACAACAACCACTCC
ACAAACAACAGCTACTGTCCAATCATCAATTATGACGACTCAACCAACAG
CAACGGCCGTTCAACAAAGCATGAAGAAATCCACCAATAATCCAGACCAA
TCTTCAAACAtcatgaaaaatacaaaaagaacaaagaaatgttttgcCAT
AAACATTTGGTATGGTCAACCATTAATCAACGATTGGTGTCAAAAGAATT
GTCGTGATGATTCATGTGAAGGTTACAAAAGTTATTGCTCCTGTGATCCT
GACTGGAAACCAAATACCTCTTGCAAAGCCAGTAAACTTTTTAGtgcaaa
taaaaacattgaaaaatggTGCAGCAACACTTGTCCGACTGGTTATTGCC
CAAAAGCATTTTGTCATTG Coding sequence (CDS) from alignment at sc0000007_pilon:1571812..1573930+ >MSTRG.1542.1.p1 ID=MSTRG.1542.1.p1|Name=MSTRG.1542.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3888bp|location=Sequence derived from alignment at sc0000007_pilon:1571812..1573930+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCAATATGGTAGTTTCACAAGCTGAATATGTTCGAATTTGCTACTA
CACGAATTGGTCACAATATCGTCCAGGAAAAGCCAAGTTTTCACCATCAC
ACATCGATCCTTTTCTTTGCACACATATCGTCTATGCTTTTGCAAAGATC
GTCGAACATCGTTTGGAACCTTATGAATGGAATGATGATGAATATGCAAA
TTATTacaaacaaatcatTAATTTAAAGAACAAAAATCCAGCATTGAAGA
TTCTACTTGCTGTTGGTGGATGGAATCACGAATCTCAAGGAAGTCCTTTC
TCCGAAATGGTAAAGACACGCTCAAACAGACAAGGATTCATTCAACAAAG
TATCCGGTTCCTCAGACAACGAGGTTTCGATGGATTGGATTTAGATTGGG
AATATCCAGCCAGTAGAACATCTCCATTATCTGACAAACAAAGATTCACA
GTTCTTTGCAAAGAACTTCAACAAGCCTTCGACCAAGAAGCTCGATCTTC
TGGCAAAGAAAGATTAATGCTGACAGCAGCCGTAGCAGCAGGAAAGGCAA
CCATCCAAAGAGCTTACGAAGTTTCAAAACTCGGCCAATCTTTGGATATG
TTGCATTTGATGAGTTACGACCTTGCAGGAGCTTGGGATGGTAAAACTGG
TCACCACACATCAATGGATGCTAACAGGAAATGGTCCGTTCCCGTTGGAT
TAGATACATGGATTAACGGTGGATTTCCAGCTAATAAGATTGCGTTGGGT
TTGGGAACATACGGCAGATCATTCACATTGACTTCAAAGTCCAAATCAAA
GATGGGAGAAAAATGTAAAGGAGCTGGAGCAAGTGGTCCTTCCACCAGAG
AAAGTGGATTTCTCTCTTATTACGAAATTTGCGACAAAATTAAATCTGGA
ATGAAAGTAGTTCAACATCCTAAAGCAATGGCACCATATGGTCACAAAGA
CAATTATTGGGTTGGTTATGATGACATTGAAAGTTTGAGATATAAAGTCA
AGAAACTGATCAAAGGACGCGGATTAAAAGGAGCCATGTTTTGGTCACTT
gatttggatgacttttctggaGCTCATTGTAACCAAGGAAAATTCCCTTT
GCTGAATGCTGTAAAGAAAGAACTTGGTGCACAAGGAACAGTTACTTCAA
TCATCTCCAAATCAGCTCACATCAAAACCAAACCAAAGATTGGCGAGAAG
TTATTGAAGAGCACCCGAACAACCACCACAACAACAAAAGCACCAATGAA
ATCAGCATCAAACAAAAAACGATGTTTTGCAGCCAACGTGTGGCTTGGTC
ATGCTGCAATGGATCAATGGTGCATTCGAAACTGTGCCGACGGAAACTGT
GATCCTCGCTTTTGTTCCTGTGAAGAAACATCAATGAAATTATCTacgac
aacgaccactcaaccgacaacaacgaccactcaaccgacaacaacgacca
ctccatatacaacaacgaccaccaaGCCTACGACAATGGCCATCCGACAA
ACCACTACTACCATCAGGCCAACAACTAccacaaaaccaaaaaaaatgat
aattcGACCAATAACAACAACCACTCCACAAACAACAGCTACTGTCCAAT
CATCAATTATGACGACTCAACCAACAGCAACGGCCGTTCAACAAAGCATG
AAGAAATCCACCAATAATCCAGACCAATCTTCAAACAtcatgaaaaatac
aaaaagaacaaagaaatgttttgcCATAAACATTTGGTATGGTCAACCAT
TAATCAACGATTGGTGTCAAAAGAATTGTCGTGATGATTCATGTGAAGGT
TACAAAAGTTATTGCTCCTGTGATCCTGACTGGAAACCAAATACCTCTTG
CAAAGCCAGTAAACTTTTTAGtgcaaataaaaacattgaaaaatggTGCA
GCAACACTTGTCCGACTGGTTATTGCCCAAAAGCATTTTGTCATATGGCC
AATATGGTAGTTTCACAAGCTGAATATGTTCGAATTTGCTACTACACGAA
TTGGTCACAATATCGTCCAGGAAAAGCCAAGTTTTCACCATCACACATCG
ATCCTTTTCTTTGCACACATATCGTCTATGCTTTTGCAAAGATCGTCGAA
CATCGTTTGGAACCTTATGAATGGAATGATGATGAATATGCAAATTATTa
caaacaaatcatTAATTTAAAGAACAAAAATCCAGCATTGAAGATTCTAC
TTGCTGTTGGTGGATGGAATCACGAATCTCAAGGAAGTCCTTTCTCCGAA
ATGGTAAAGACACGCTCAAACAGACAAGGATTCATTCAACAAAGTATCCG
GTTCCTCAGACAACGAGGTTTCGATGGATTGGATTTAGATTGGGAATATC
CAGCCAGTAGAACATCTCCATTATCTGACAAACAAAGATTCACAGTTCTT
TGCAAAGAACTTCAACAAGCCTTCGACCAAGAAGCTCGATCTTCTGGCAA
AGAAAGATTAATGCTGACAGCAGCCGTAGCAGCAGGAAAGGCAACCATCC
AAAGAGCTTACGAAGTTTCAAAACTCGGCCAATCTTTGGATATGTTGCAT
TTGATGAGTTACGACCTTGCAGGAGCTTGGGATGGTAAAACTGGTCACCA
CACATCAATGGATGCTAACAGGAAATGGTCCGTTCCCGTTGGATTAGATA
CATGGATTAACGGTGGATTTCCAGCTAATAAGATTGCGTTGGGTTTGGGA
ACATACGGCAGATCATTCACATTGACTTCAAAGTCCAAATCAAAGATGGG
AGAAAAATGTAAAGGAGCTGGAGCAAGTGGTCCTTCCACCAGAGAAAGTG
GATTTCTCTCTTATTACGAAATTTGCGACAAAATTAAATCTGGAATGAAA
GTAGTTCAACATCCTAAAGCAATGGCACCATATGGTCACAAAGACAATTA
TTGGGTTGGTTATGATGACATTGAAAGTTTGAGATATAAAGTCAAGAAAC
TGATCAAAGGACGCGGATTAAAAGGAGCCATGTTTTGGTCACTTgatttg
gatgacttttctggaGCTCATTGTAACCAAGGAAAATTCCCTTTGCTGAA
TGCTGTAAAGAAAGAACTTGGTGCACAAGGAACAGTTACTTCAATCATCT
CCAAATCAGCTCACATCAAAACCAAACCAAAGATTGGCGAGAAGTTATTG
AAGAGCACCCGAACAACCACCACAACAACAAAAGCACCAATGAAATCAGC
ATCAAACAAAAAACGATGTTTTGCAGCCAACGTGTGGCTTGGTCATGCTG
CAATGGATCAATGGTGCATTCGAAACTGTGCCGACGGAAACTGTGATCCT
CGCTTTTGTTCCTGTGAAGAAACATCAATGAAATTATCTacgacaacgac
cactcaaccgacaacaacgaccactcaaccgacaacaacgaccactccat
atacaacaacgaccaccaaGCCTACGACAATGGCCATCCGACAAACCACT
ACTACCATCAGGCCAACAACTAccacaaaaccaaaaaaaatgataattcG
ACCAATAACAACAACCACTCCACAAACAACAGCTACTGTCCAATCATCAA
TTATGACGACTCAACCAACAGCAACGGCCGTTCAACAAAGCATGAAGAAA
TCCACCAATAATCCAGACCAATCTTCAAACAtcatgaaaaatacaaaaag
aacaaagaaatgttttgcCATAAACATTTGGTATGGTCAACCATTAATCA
ACGATTGGTGTCAAAAGAATTGTCGTGATGATTCATGTGAAGGTTACAAA
AGTTATTGCTCCTGTGATCCTGACTGGAAACCAAATACCTCTTGCAAAGC
CAGTAAACTTTTTAGtgcaaataaaaacattgaaaaatggTGCAGCAACA
CTTGTCCGACTGGTTATTGCCCAAAAGCATTTTGTCAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1571812..1573930 + |
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