MSTRG.15417.1.p1 (mRNA) -

Overview
NameMSTRG.15417.1.p1
Unique NameMSTRG.15417.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000136_pilon:198494..199975-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15417.1.p1 ID=MSTRG.15417.1.p1|Name=MSTRG.15417.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1482bp|location=Sequence derived from alignment at sc0000136_pilon:198494..199975- (Clytia hemisphaerica_ch_hm2_pilon)
AGTTGCCAGAGGAGCTGTTATCAATTGAAAATTTAGAATTAGATGATATG
AATCTCGATGAAGATGAAGAAATACAATTTGACATTGAACCAATCATAGT
GGATGAGGACATTATCCAGGAGGCAGATGAACTTGAGCTGGACATTGAGT
CCGAATCCACCAATTCAGAAATCTCAATCATTTTTACAAGTGACACTGAT
GTAGCCATTGTAAAATCATATGATGAACTGGTTGAAGATAAGAAAGAGAC
CAAGGATAAACCTATTTTGCACTGCAAACATTGCAACAAGCAGTATGTCA
TCCCTAAATACTTGAAAGATCACGAAGAATCATGTGGTGAGTTTTACTTG
ATAATTATATATGTATATGTATATGTCTCAGTTTTTCTGTTCTGCTTTAA
TTCAATTGCCTGCTCATGCAGTTATGATATGATCGCTTAGTCTGAAGACC
GTAGTCTTTGTAATGCAACGTCCCCTAGCATCTCGAGAAAAAAAAGAGGA
TTTTCCTTACCTACTACTACTACTATACTGTGGCTATGTAGCCAAAACTT
TGTTTACATTCTTCAATCAAAACTACTCAATAAACTGTACCAGTTTGTTG
GATGATACCGTCAACAGCTCTAACTTGGGACAGTCTGACAAAACATGGGA
CAGCAATTTGGCCATCATTTTACTGAACCTCCAAAGTCATCAAATTAACA
TAGTCGCAAAATCATAGAAAACAAACTTGTTGTCAACAGAGATTTAACAG
TAAGTGAAAATATAGACCAGAAAGTCAACCATACCATGATATGACCACCC
ATCCCAAGTAAGAGCTGTTGACGGTATTACACAAAATCCTTCCTTTCTTT
GTTATTTTTTGGATCAAAATATGATATATTATGTCCCCATATGATGGCAT
GTTGAATAATCATGATTTTATTTTTATTTCAGTATCCAAATCAAGCAAGA
ACCTCACAGAATGGAGGAGAAATATACAACAACAAACATTCAAATTTTTG
GAGAATGCTGTTGAAGTTGCTTCAAAAGACAGAATATTCAACCTGAAAAA
GGAATCAATTATCCATCAGCTCATCAAATATTTGAAATCCAAATTGGAAG
AAAAGGACAACACGACAACAATCAATTCTTTCAAACAATTTACTGTATGT
ATGCTTCAGTGCATACCGGATCACCCTTCTAAAATCGAAAGTTGTACATT
CAAATTAGAGGAAGTTTTCAGCAACAAAACCATATGGACATTATGGAGAA
CATTATTCAAGGACTTTCCAGAGACGAAAGAGCTTAGAATTTTACTCCAT
TACATACTTCAAAAACTCCATAAAGAGATATGGAATTATCGAAATAATCT
TGAGGAAAACAGGCCTGAAACAAAAAAACTTGAGTTAAAACTGACACTTC
AGGAAGAAAATATTTTACGGTATGTCGCAGGTTACATTCCATACGTACTC
CTGAAAAAGCTTGAAGACAGGAAAGAATCAGA

Coding sequence (CDS) from alignment at sc0000136_pilon:198494..199975-

>MSTRG.15417.1.p1 ID=MSTRG.15417.1.p1|Name=MSTRG.15417.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1764bp|location=Sequence derived from alignment at sc0000136_pilon:198494..199975- (Clytia hemisphaerica_ch_hm2_pilon)
TATCCAAATCAAGCAAGAACCTCACAGAATGGAGGAGAAATATACAACAA
CAAACATTCAAATTTTTGGAGAATGCTGTTGAAGTTGCTTCAAAAGACAG
AATATTCAACCTGAAAAAGGAATCAATTATCCATCAGCTCATCAAATATT
TGAAATCCAAATTGGAAGAAAAGGACAACACGACAACAATCAATTCTTTC
AAACAATTTACTGTATGTATGCTTCAGTGCATACCGGATCACCCTTCTAA
AATCGAAAGTTGTACATTCAAATTAGAGGAAGTTTTCAGCAACAAAACCA
TATGGACATTATGGAGAACATTATTCAAGGACTTTCCAGAGACGAAAGAG
CTTAGAATTTTACTCCATTACATACTTCAAAAACTCCATAAAGAGATATG
GAATTATCGAAATAATCTTGAGGAAAACAGGCCTGAAACAAAAAAACTTG
AGTTAAAACTGACACTTCAGGAAGAAAATATTTTACGGTATGTCGCAGGT
TACATTCCATACGTACTCCTGAAAAAGCTTGAAGACAGGAAAGAATCATT
GCCAGAGGAGCTGTTATCAATTGAAAATTTAGAATTAGATGATATGAATC
TCGATGAAGATGAAGAAATACAATTTGACATTGAACCAATCATAGTGGAT
GAGGACATTATCCAGGAGGCAGATGAACTTGAGCTGGACATTGAGTCCGA
ATCCACCAATTCAGAAATCTCAATCATTTTTACAAGTGACACTGATGTAG
CCATTGTAAAATCATATGATGAACTGGTTGAAGATAAGAAAGAGACCAAG
GATAAACCTATTTTGCACTGCAAACATTGCAACAAGCAGTATGTCATCCC
TAAATACTTGAAAGATCACGAAGAATCATGTGTATCCAAATCAAGCAAGA
ACCTCACAGAATGGAGGAGAAATATACAACAACAAACATTCAAATTTTTG
GAGAATGCTGTTGAAGTTGCTTCAAAAGACAGAATATTCAACCTGAAAAA
GGAATCAATTATCCATCAGCTCATCAAATATTTGAAATCCAAATTGGAAG
AAAAGGACAACACGACAACAATCAATTCTTTCAAACAATTTACTGTATGT
ATGCTTCAGTGCATACCGGATCACCCTTCTAAAATCGAAAGTTGTACATT
CAAATTAGAGGAAGTTTTCAGCAACAAAACCATATGGACATTATGGAGAA
CATTATTCAAGGACTTTCCAGAGACGAAAGAGCTTAGAATTTTACTCCAT
TACATACTTCAAAAACTCCATAAAGAGATATGGAATTATCGAAATAATCT
TGAGGAAAACAGGCCTGAAACAAAAAAACTTGAGTTAAAACTGACACTTC
AGGAAGAAAATATTTTACGGTATGTCGCAGGTTACATTCCATACGTACTC
CTGAAAAAGCTTGAAGACAGGAAAGAATCATTGCCAGAGGAGCTGTTATC
AATTGAAAATTTAGAATTAGATGATATGAATCTCGATGAAGATGAAGAAA
TACAATTTGACATTGAACCAATCATAGTGGATGAGGACATTATCCAGGAG
GCAGATGAACTTGAGCTGGACATTGAGTCCGAATCCACCAATTCAGAAAT
CTCAATCATTTTTACAAGTGACACTGATGTAGCCATTGTAAAATCATATG
ATGAACTGGTTGAAGATAAGAAAGAGACCAAGGATAAACCTATTTTGCAC
TGCAAACATTGCAACAAGCAGTATGTCATCCCTAAATACTTGAAAGATCA
CGAAGAATCATGTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15417MSTRG.15417Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15417.1.p1.exon2MSTRG.15417.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15417.1.p1.exon1MSTRG.15417.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15417.1.p1MSTRG.15417.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000136_pilongenomesc0000136_pilon:198494..199975 -