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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:720229..725712+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15394.2.p1 ID=MSTRG.15394.2.p1|Name=MSTRG.15394.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5484bp|location=Sequence derived from alignment at sc0000135_pilon:720229..725712+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAAACcttccaaaaaaacaaattttaaagatGGCGGCTCTTGCTACGAG
AAGCACGTTTTTACTTCAGCAACAAAGAACTCTTCCAGTGTGCAGTGTTA
TTTTTTCTAGAGGATTgaagaagaaccaactttacaagaagaagaagaag
agaaagatcaaggaaagagacggtaaagaagTCACGGTTGAACATATTTT
CTGGGACAAATATTATGCAGACAACCCATCAATTCTTGCTGAGCGTCAAA
TGATAAACACCAAAAGTAGTGCAAGTGGCAGTACTGTTGTTGAAGGAGGA
GGTTCCCGTCCATTAAGTGCAAGAAAGGTTTATGACACACTGACCACAGG
AGACAAGaggttttttattattatatctccttttttccctttttttaggG
CTAGGGTGGTCACGCACTCACATCAATTGACGTTAGGcgagagaaatttt
tttcttcaccctttcttcaataaattgaagatgagaaaaaacctaagcct
tagaatcacagatggaaaaaaatatatgaaggtgggattttacagccgtc
CGTCGTGCAAGGCACGTCAGGGATTACCATagttgtcaatgtgttgtgtc
agcttgtcagcattgtattgttatAAAGGGAAAGAtgaaagaggtaagac
tagcctagctTCTATAgaagtttaagtttagactgtgtttatatcaaaat
ctgcaacaaaaaatgaaagttgtCTCTTCTTACTGATTGCTTCGTGGCAC
TCTATCGCGGACTATttatcagtgcgtcacaaacagccatatatagggtg
cgcactcgtcgggattttttgcgcggaacgaggaagaatttacaaaaatg
aacttcaaggcattagtacttacctttaaatcatccaaatgtgctcattc
ttttttttaaatcaatcaggaattatcagggaaacaagtaaaaaaaactg
catcaaggtatctattttctttccaaagatattcatgtttttcgacgtca
aggtgaaaacgcgatttagcgctgaccacggcaccggaaaattctcgacc
cacattgaaacaaatgactgtcgctattgagctggtccatcttttcaatc
gcggtttttttagtaaacccagggtaagattaagctacaatctatcacaa
cctgctttatttgaaaatctacaggccgtctggaatttcgaaaaataaga
agaaattgcgattttttaacaagattgcggattttttcatttaagcacca
tacaccatctgaaagctgaggatttcagctttctagtggtgaaatttgtt
tttagctatcatttccagctcattagcgataagctaaagtttaacagtca
tcgggccgattttcagaccgcaccggcaaaactccccacaccccgccaca
cggaagactagatttcatccgccatttttggcgcgattttggtgcttccg
aaaattatttcttgctggcgtggtgtaaggaggcgattctttgaaaaggt
gatttttttgtgttttgaaaatggaataactttgggaatacttaaccaat
tttaataaatgacccctcatttttctcacaaaggtaaggattttcaaata
aaattagtttggttttttaaaatttagggGAAAATTTTGTCCTGTCCACC
Ctaccatataaacaaaactcaacattctcacaaaagttgtctttttgatt
tcccaaacattcgtctcaagcgttcccttccacaataatttatgtaattg
caattgcggtcagtccacagtcggcttcaacatatacacgtgtttttatt
tacgtgaccgaagtgcctactaaaacaatccgggggtaaatagcgaagca
acacagcagattattcgtaagtatcttttggcattgacaatcaaatacaa
tatattatactatatttccttaattcaaaaatcaaaaattcatctttcat
tcgcaaaaaataaaaataaaagaataatgaattaatattacatactaaga
cgcccccgtcttttactctcatttaatttccaatctcggcacgtgcaaaa
cgcccgtccgcccaatacccacccaatcagcttaaattcactttaattgt
cctttgacattcaaaaaatagtatttaaaaattatgaatttataataatt
acaaaaaacaaaaagtttgatatatacttcattggtgaaatattcaataa
attcctggtttcaattttcagtgggcgttcttctagggcttcgtttatcg
cgcaatttttgcatcacacaaactttctcggccgctcgtaataattatac
attgccaaatttggttctccattgtcgagtcaggatcgatggtgacgtca
cctaagcataaaaaagaaaggatttcgtcagttttatgcatatattaatt
tgcgagatattctattcgccgcgcgagcgcacttttcgtagactattcag
agtactttcttttactcgcgggattgatggtaacttttcatcttcgttat
ttttaaaatgaagcacaaccgaaaaaaaacgaaacttcagaaagttgcgt
atttccagtgagtaaacgactctgacaattaacaaaattgatgatgatga
ttttttttcggtcaggccaatgtctcgcattgggggttctagtcttgagc
ccaaagcctacgcaggattgcagcgtttgggtaaacgagacaaaactcta
aaaaagctggtgttttgacgcgcttccgtgctctcgaaatatcgcggttt
gaGACGCACTGTTTATTTAATTTCCACCAATAAGATTGCTGCATTTCATA
CAGCCCTTCtctttggcacccgtggcctttcagtgccttgaagcacaggc
ggctgtaaaatctctCCCTTCATAAaacttcttttatttgtttcaatcca
tgATCCTGAGGAGTACACTATATTTCTCATCCTCAATTCTCCAAAGAAAG
CGGAAATTTAATtaatgcgagagttagattgtcaacaaaaagTGCcatta
aaaatcattgaataataGAAGAGCTTAAaatctcaaatattttcattttg
aagaattgctacaaaaaagtgaaacatggaagaGTCattgaaatggggga
tttggaaaactttctatataccgggtgacccacgaaaaagttcagacgtt
tcctgACATCTTGAgaccgaacaaatgtcccaaagtgcttggagttttga
tatttagaaagtagatatcctaacttaaaatttgagctatcactttttaa
atttgaccaatttgttctccacttatgagcttttaaagtcaaaattcact
tttcggaaagtgtaaaaaacacgtaaaaaagaggtattaaatttaagcaa
tcaattagaaaatcacttacaaattgacttatttaacgagttttgtgaca
ttaataattaataaaaacacttttagaagtaatttttgtttaaaacaagt
ctagtttttataaaaattggcgcttttgtagatttttttcagattttacc
aaatttgataccccttttttacgtgttttttacactttccaaaaagtgaa
ttttgactttaaaagctcacaAGCGgagaacaaattggtcaaatttaaaa
agtgatagctcaaattttaagttaggatatctaatttctaaatatcaaaa
ctccaagcactttgggacatttgttcggcctcaagacgtcaaGAAAcatc
tgaactttttcgtgggtcacccggtattatgtttagttttttgcaaaaac
ccctgtaactatgagCAAGCACCCCGTTGTTAAGattggcttgaaatcaa
aaatgaaaccactgaaaacgaaagtaaaattggcccgcactccaaatccc
gtaatcttgatataggagtttaagtctgTTTAGTAAATGTGCAAGAGGTA
GCGAAATAATGTGTCTGACGAAGGGTTAAATGTCTCAAGATTTAGTTTTA
TTACCACAGTGGCAATGTTTTCAAAGAGGTGTAGAGACAGGTAGGGATTC
ATCAACAGAACATCCAATTGATGTTTTCTGTGGTAATTTTGAGTTTGAAT
GGCTCCCCATGaacataccgggtgcgccacaaaaaagtttctctctttaa
aactaattttctcaaaatctaaaatttttagaaGAACCATTccaatttca
ttggaaagaagaaagataaacttaaattttgataggttatttattaaatt
tgattcattagatcaaaagttatgctcaattaaataaaaaagttactttc
tgaaagtgctcaaaaaggttaaaaatcgaccttctatcaaatcaaacaga
agcataattacttgttacatcagtattttcgctttagtcattaaaaatga
taattagctgtctaaatgatcTTTTGTTGTATAATGGAAGGTTTAATTTC
AACaaaaggcagaaaattcgtcgaaaaaggccaaaaatccagtaaaattc
ataaaaatacataaaaatatgGGTTTTGCGGTACATCCAGTCTTACTAGA
CTTTATCCAATCTAAAACCAAAAATGTGaggaaaatttgggtaaaatAAT
TTAAGGTGATCTTGattaagattttaaacccttttgacccttcagtttcg
aaatttatgtgtttaattacttaaaaatgtttttaattatgTAAAGGCTA
TCGTATTgccaattttgaaatgaaaatttgataggttgattttcaacgtt
tttgagcactttctgaaagtaacttttttattcaattgagcataactttt
gatttaatgaatcaaatttaataaatgacccatcaaaatttaagtttacc
tttcttctttccaatgaaattggaaaggttctttcaaaatttttagattt
caagaaaattagttttaaagagagaaacttttttgtggcgcacccggtag
aaaaataaaccttttccTAATCATGATGTCATATCACATAATAAAAATGT
TAgactttgttttaaaaaaacttgagaAGACTACTCAATCAATTTTATCT
TCACAGGCTTGCCATTGCTGGTGTATTTGCTTTGGTCACTGGATTCATTG
CAATGAAGATCACCTTTGCTTAGTAAGAAGCTTATAAGTATGTTCTTTGT
TAGCAATGACCATTTAAGTAACAGCATGGTGTGTtaaatttattctttta
aagACTCTTTccgtattttcaatttttcaagtttaaCTTGAGAGGATTAT
ATTgctcaatattttaaaagttatcttccataaaagaaaaaactaaaaag
tactGAGAGTTCCGGCCTTACGTACTAATTATATGTACAGTAATATTATA
CAGAATTATTGCCTAAAGTattaataatgttaaaaaaacaaaaaatgtta
cCATTTTGATATATATTCATTAATGATATTTTTCTCTTGTAGATAAAGTC
ATCgtcaaagaaaatttaatttgtacatattttttatacataAGAATAAA
TCAAAATTGGGATATTCGTCCCTGTCAAAAAGTA Coding sequence (CDS) from alignment at sc0000135_pilon:720229..725712+ >MSTRG.15394.2.p1 ID=MSTRG.15394.2.p1|Name=MSTRG.15394.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1188bp|location=Sequence derived from alignment at sc0000135_pilon:720229..725712+ (Clytia hemisphaerica_ch_hm2_pilon)
atGGCGGCTCTTGCTACGAGAAGCACGTTTTTACTTCAGCAACAAAGAAC
TCTTCCAGTGTGCAGTGTTATTTTTTCTAGAGGATTgaagaagaaccaac
tttacaagaagaagaagaagagaaagatcaaggaaagagacggtaaagaa
gTCACGGTTGAACATATTTTCTGGGACAAATATTATGCAGACAACCCATC
AATTCTTGCTGAGCGTCAAATGATAAACACCAAAAGTAGTGCAAGTGGCA
GTACTGTTGTTGAAGGAGGAGGTTCCCGTCCATTAAGTGCAAGAAAGGTT
TATGACACACTGACCACAGGAGACAAGagGCTTGCCATTGCTGGTGTATT
TGCTTTGGTCACTGGATTCATTGCAATGAAGATCACCTTTGCTTAAatGG
CGGCTCTTGCTACGAGAAGCACGTTTTTACTTCAGCAACAAAGAACTCTT
CCAGTGTGCAGTGTTATTTTTTCTAGAGGATTgaagaagaaccaacttta
caagaagaagaagaagagaaagatcaaggaaagagacggtaaagaagTCA
CGGTTGAACATATTTTCTGGGACAAATATTATGCAGACAACCCATCAATT
CTTGCTGAGCGTCAAATGATAAACACCAAAAGTAGTGCAAGTGGCAGTAC
TGTTGTTGAAGGAGGAGGTTCCCGTCCATTAAGTGCAAGAAAGGTTTATG
ACACACTGACCACAGGAGACAAGagGCTTGCCATTGCTGGTGTATTTGCT
TTGGTCACTGGATTCATTGCAATGAAGATCACCTTTGCTTAAatGGCGGC
TCTTGCTACGAGAAGCACGTTTTTACTTCAGCAACAAAGAACTCTTCCAG
TGTGCAGTGTTATTTTTTCTAGAGGATTgaagaagaaccaactttacaag
aagaagaagaagagaaagatcaaggaaagagacggtaaagaagTCACGGT
TGAACATATTTTCTGGGACAAATATTATGCAGACAACCCATCAATTCTTG
CTGAGCGTCAAATGATAAACACCAAAAGTAGTGCAAGTGGCAGTACTGTT
GTTGAAGGAGGAGGTTCCCGTCCATTAAGTGCAAGAAAGGTTTATGACAC
ACTGACCACAGGAGACAAGagGCTTGCCATTGCTGGTGTATTTGCTTTGG
TCACTGGATTCATTGCAATGAAGATCACCTTTGCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000135_pilon | genome | sc0000135_pilon:720229..725712 + |
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