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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:569009..572098+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15388.1.p1 ID=MSTRG.15388.1.p1|Name=MSTRG.15388.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3090bp|location=Sequence derived from alignment at sc0000135_pilon:569009..572098+ (Clytia hemisphaerica_ch_hm2_pilon)
AATTGCGTGATAttgtgatcagagttaccgctggggggcctcgcCTAAAG
CCGGAGAATCTGCAAGAGTCTACAGTAAATTAATTTTCATATGTGTTTTA
GTTTAGGTATAGAAAAACTGTCGAGTCTTATTGCAGGTGTATTTAAAGGT
TTCAAACAAGTGCATTTGACTGAAGtctgttaaccaatcaaattcaaGAA
AGCTTTACAACCAGCCAatcagaatgttgaaaaagataACAAGCGAGCCA
ATCATATTTCTTTATGCCACCGTGTACATGATCAACTTGTCCATTCTGCC
ACAGTTggttcttcaaaaagtttgtttacaaaaacattatggaaattcaa
ctctgtgtggtgAAAAATCTGGGTTGGCAATCACACAAGAGATGAAGAAG
GTAAAATTTCAACACATCTCAACTCATATTAGActtagactggcacgcca
gtcgggctggaacggtatcacgcgggaaaagtgagcgtaggagttaggta
agcgtaagAAGAAATTCATTTGTCGGTGGCAAGGGCTGAAATCccttaat
cagcagcctctcaccaagtTTTGATCGTTCttctacgcagctcctattct
agcaaacgcccgctgCCTTTATgctcccgccctctgacatgattaattaa
cagactagtttgctagtctaacTAGACTATACTCCTggtgggggggggta
cttagacaaaattgggtacggggacttgttgctggtcagggtcccttttc
tAGGCTCTGAAGAAATCAGTAATAGAGTCCCAAGTTTAATAGTTTTCAAG
ATTTGTACctgacagggtcaacttttggttattttgtatgattttcaAGG
TGAAATTAgagcatttttcaatttttcgtctcAGTAATTTTTGCAACTTT
TCAGGTTCCCatatttaccaaacattcatatcttaCAGGTTCTAGTTTTA
AGCTCCAGAGGCattccccgtcggccgtcaaggtcttCCCCCGGGCTTAT
GCTATAGTCTAACACTTTGTCACCTTCTGAAAAATAATATCCAAGGCGAA
GAAAATTCGTGAACGGGTTTTGCTTtcaaagcgagtttaaagccgTAGAG
TATGCAATGTTGATTAGTCCGAAAAGGGCGTGCAGGTTGTACAGACAGGG
ACAGACAGAAACCTACCTAGGCAAAAGCATAGGCTTTGCAGATATACTGC
AAAGATCACGGCACAAAACCCACGTCCgatcttttaataaaatatagaaa
aatgacACAATCTTGCGCATATCGAGAATCTTCGCTAAAAATGAGTTTGC
GAGTTTGAGGCTCAAATCAAATCTATCTATCAGGTTTATAAGTCTTGTGT
GTTGAAATTTTGTTATTACATTTCACAATTTTATGATATTATTGAATTTT
AGGAAACGTCTCATTGGTGGTTCGCTATCCTTGCTTCATCTCAAATTCCC
GCCATTTTTACCGTTCTCATCTGGGGACCAATCAGCGACGCGATCGGTCG
GAAGAAAGCAATGTTGTTGATTCCAATAATGAGTATTTTGCAGAATATTG
TTTTCCTGTTATGCTCCTATTATATCAATTCTTCGATCAtttatttgtgt
tttggaatgtttttggcgtgtttttttGGAGAATTTCCAGGAGTACTAGC
TTTATCCTGTGCATTCATTGCAGATGTTACAGCGGGTCTAAAAGCTAAAT
CTCGAGTCACTAGAATGGCGCTTATAGATTGTGCTGTTAATCTAGCTGGG
TTACCTGCAGGGCTTTTCGCTGGTCAGCTTTTAAAACATCTAGGATTCAC
AGCTGTCTTTGGACTTTCGATCGGAATCAATCTGTTGTTGTTAGCTTACA
TCATTTTTCTTTTACCCGACCCAAGAGCATTACAAAAGGTTCCCAAAGGC
AAAGAGCTCAAAGAATCAACATCTTCGGAAAACAAGAAACTTGTTCCTGC
GTCAGCGACGAATGAAAGCATCTCAGATAACTCAAGCAATGTTTCCAGTA
ACATTGACAGAGTGCCCGACTCTTCAAACGATAGCTCCTCAGAGTCTGCA
AGTGAATCGCCACCTCAGTTAGACAAGAAACCAATCACTTGTGATCTCTT
TAAACCGCACAAGCAAATCTACCTTGTTTACAATCTATTATCGTGCAAAG
AAAGGAGACATTTAATTCTACCACCCCTGTTTGCATTCAGTTTTGTTATT
TACGCTTTTATTGGAGAACTAACCATTACGTCATTATATCTCAAAAGTGA
TCCTCTAGCCTTCACTCCAGACTACATCGGATATTATTACGCCTCACAGG
CTGTTATTCGTAGCCTTGGAATTCTCCTGGTGACACAATTCGCTTATCGA
GTTTTAAAAGCGTCAGATGTTAACGTTTTATTATTTGGGATTGCTACACA
AATTATGTGTTATGTTCTTATCGGGTTTTCTCGGGATACGTTATCGGTAT
TCATGGCAAATATTATCGGTTTCGGTTTAACAGTCGCGCTATCGTTGTCT
AGaagctatacatcaaaacatgTACCACCGGAGCAAGTTGGTACCCTGAT
GGCGGCATTCGAATCTATCGACGCCCTATCATTTACGACAAACTTGATGT
CGATTGAAGTTTACAATGCAACTCTAGATCGTTATTCAGGAGCTGTATTT
CTCTTCTTAGCTGGCTGCTCAAGCGTTGGTTTTTGTATAACGGTGgccaa
caaaatttatttaaagcGAATACGAAATGAACTGAACAGCGAAATGAATG
AAGCtcttaatgaaaattttagaactTCGGATGCTTGATATATATTTATT
CTTAAACTTGACTTTTTGTTTTAATCTGcatataatatttttgttttgtg
aagCCTAAATTTGTGATAATATTCTGATTTTTAATTTAGCTGTGATATTC
GAATAGTTTATTCTTATTGAAATGTGACGAATTGTCTGactaggctgaga
atatagcctggaagccatcATACctctccaaaatcgaaatatccgaataa
aaaatgtcattctaggtcgaactttaaattctgcaaaGCGCTAAAATACC
CAGAATCGCTAGCATATTTTGACCTGAATTGTAGATCTTG Coding sequence (CDS) from alignment at sc0000135_pilon:569009..572098+ >MSTRG.15388.1.p1 ID=MSTRG.15388.1.p1|Name=MSTRG.15388.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3126bp|location=Sequence derived from alignment at sc0000135_pilon:569009..572098+ (Clytia hemisphaerica_ch_hm2_pilon)
atgttgaaaaagataACAAGCGAGCCAATCATATTTCTTTATGCCACCGT
GTACATGATCAACTTGTCCATTCTGCCACAGTTggttcttcaaaaagttt
gtttacaaaaacattatggaaattcaactctgtgtggtgAAAAATCTGGG
TTGGCAATCACACAAGAGATGAAGAAGGAAACGTCTCATTGGTGGTTCGC
TATCCTTGCTTCATCTCAAATTCCCGCCATTTTTACCGTTCTCATCTGGG
GACCAATCAGCGACGCGATCGGTCGGAAGAAAGCAATGTTGTTGATTCCA
ATAATGAGTATTTTGCAGAATATTGTTTTCCTGTTATGCTCCTATTATAT
CAATTCTTCGATCAtttatttgtgttttggaatgtttttggcgtgttttt
ttGGAGAATTTCCAGGAGTACTAGCTTTATCCTGTGCATTCATTGCAGAT
GTTACAGCGGGTCTAAAAGCTAAATCTCGAGTCACTAGAATGGCGCTTAT
AGATTGTGCTGTTAATCTAGCTGGGTTACCTGCAGGGCTTTTCGCTGGTC
AGCTTTTAAAACATCTAGGATTCACAGCTGTCTTTGGACTTTCGATCGGA
ATCAATCTGTTGTTGTTAGCTTACATCATTTTTCTTTTACCCGACCCAAG
AGCATTACAAAAGGTTCCCAAAGGCAAAGAGCTCAAAGAATCAACATCTT
CGGAAAACAAGAAACTTGTTCCTGCGTCAGCGACGAATGAAAGCATCTCA
GATAACTCAAGCAATGTTTCCAGTAACATTGACAGAGTGCCCGACTCTTC
AAACGATAGCTCCTCAGAGTCTGCAAGTGAATCGCCACCTCAGTTAGACA
AGAAACCAATCACTTGTGATCTCTTTAAACCGCACAAGCAAATCTACCTT
GTTTACAATCTATTATCGTGCAAAGAAAGGAGACATTTAATTCTACCACC
CCTGTTTGCATTCAGTTTTGTTATTTACGCTTTTATTGGAGAACTAACCA
TTACGTCATTATATCTCAAAAGTGATCCTCTAGCCTTCACTCCAGACTAC
ATCGGATATTATTACGCCTCACAGGCTGTTATTCGTAGCCTTGGAATTCT
CCTGGTGACACAATTCGCTTATCGAGTTTTAAAAGCGTCAGATGTTAACG
TTTTATTATTTGGGATTGCTACACAAATTATGTGTTATGTTCTTATCGGG
TTTTCTCGGGATACGTTATCGGTATTCATGGCAAATATTATCGGTTTCGG
TTTAACAGTCGCGCTATCGTTGTCTAGaagctatacatcaaaacatgTAC
CACCGGAGCAAGTTGGTACCCTGATGGCGGCATTCGAATCTATCGACGCC
CTATCATTTACGACAAACTTGATGTCGATTGAAGTTTACAATGCAACTCT
AGATCGTTATTCAGGAGCTGTATTTCTCTTCTTAGCTGGCTGCTCAAGCG
TTGGTTTTTGTATAACGGTGgccaacaaaatttatttaaagcGAATACGA
AATGAACTGAACAGCGAAATGAATGAAGCtcttaatgaaaattttagaac
tTCGGATGCTTGAatgttgaaaaagataACAAGCGAGCCAATCATATTTC
TTTATGCCACCGTGTACATGATCAACTTGTCCATTCTGCCACAGTTggtt
cttcaaaaagtttgtttacaaaaacattatggaaattcaactctgtgtgg
tgAAAAATCTGGGTTGGCAATCACACAAGAGATGAAGAAGGAAACGTCTC
ATTGGTGGTTCGCTATCCTTGCTTCATCTCAAATTCCCGCCATTTTTACC
GTTCTCATCTGGGGACCAATCAGCGACGCGATCGGTCGGAAGAAAGCAAT
GTTGTTGATTCCAATAATGAGTATTTTGCAGAATATTGTTTTCCTGTTAT
GCTCCTATTATATCAATTCTTCGATCAtttatttgtgttttggaatgttt
ttggcgtgtttttttGGAGAATTTCCAGGAGTACTAGCTTTATCCTGTGC
ATTCATTGCAGATGTTACAGCGGGTCTAAAAGCTAAATCTCGAGTCACTA
GAATGGCGCTTATAGATTGTGCTGTTAATCTAGCTGGGTTACCTGCAGGG
CTTTTCGCTGGTCAGCTTTTAAAACATCTAGGATTCACAGCTGTCTTTGG
ACTTTCGATCGGAATCAATCTGTTGTTGTTAGCTTACATCATTTTTCTTT
TACCCGACCCAAGAGCATTACAAAAGGTTCCCAAAGGCAAAGAGCTCAAA
GAATCAACATCTTCGGAAAACAAGAAACTTGTTCCTGCGTCAGCGACGAA
TGAAAGCATCTCAGATAACTCAAGCAATGTTTCCAGTAACATTGACAGAG
TGCCCGACTCTTCAAACGATAGCTCCTCAGAGTCTGCAAGTGAATCGCCA
CCTCAGTTAGACAAGAAACCAATCACTTGTGATCTCTTTAAACCGCACAA
GCAAATCTACCTTGTTTACAATCTATTATCGTGCAAAGAAAGGAGACATT
TAATTCTACCACCCCTGTTTGCATTCAGTTTTGTTATTTACGCTTTTATT
GGAGAACTAACCATTACGTCATTATATCTCAAAAGTGATCCTCTAGCCTT
CACTCCAGACTACATCGGATATTATTACGCCTCACAGGCTGTTATTCGTA
GCCTTGGAATTCTCCTGGTGACACAATTCGCTTATCGAGTTTTAAAAGCG
TCAGATGTTAACGTTTTATTATTTGGGATTGCTACACAAATTATGTGTTA
TGTTCTTATCGGGTTTTCTCGGGATACGTTATCGGTATTCATGGCAAATA
TTATCGGTTTCGGTTTAACAGTCGCGCTATCGTTGTCTAGaagctataca
tcaaaacatgTACCACCGGAGCAAGTTGGTACCCTGATGGCGGCATTCGA
ATCTATCGACGCCCTATCATTTACGACAAACTTGATGTCGATTGAAGTTT
ACAATGCAACTCTAGATCGTTATTCAGGAGCTGTATTTCTCTTCTTAGCT
GGCTGCTCAAGCGTTGGTTTTTGTATAACGGTGgccaacaaaatttattt
aaagcGAATACGAAATGAACTGAACAGCGAAATGAATGAAGCtcttaatg
aaaattttagaactTCGGATGCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:569009..572098 + |
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