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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:563443..566685+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15387.1.p1 ID=MSTRG.15387.1.p1|Name=MSTRG.15387.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3243bp|location=Sequence derived from alignment at sc0000135_pilon:563443..566685+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGCCTATGATTAAAATGGAATGGTTATTTTGGCTTATGGCTACTGCAG
CTCTGGTAAATTTCGGATATGGGTTGAAAAGTAGTGCTGATATTTATGCC
AAACttgttgacgtcatcaaagaTAAAAGTGCCGACGCCGAAAATGATTT
TCTGGATAAACATTACTTcactgaaaataaaagtaggtatcttttttttt
tttgctctcgcCATGAAGATAGCAtttataaacaatttttttcaatctgt
tttttgtaaaattcgAACAGATATCAAGAGATATGTATTCACATGTTACA
CCTtggttttgtgacatttttttttgtaaaagtttgaaattcttGCTTTG
TAAATCCAATATCTAGAGTCTTTGACCCCCTTAGGGGGAGCATTGATATT
GAAATTCTACATGtataaaatttgttgaaaatatcaacaatttttgaagc
cttctgattTTCTTAGCTTTATGAATTTTAAATCTAGAAATGTTGTAGAA
ATGttcttttttcaccattttctgagtatttttgtgaaaataattGGGCC
TTTGAGAGTTCCCAAAggctttagatgttcttaacttgttcttaatatgt
ttaatatttttgaaatgtaagtgttatgttcttatacattgtgttcttat
ataaaagaaGTGTATCTTACTTTTTAGATGATTCAATTTGGAAATACTCC
ATGGATGAAGCCGAGAAATTACTGAACCAAAAATATGACCTTGACGAGCT
AGTCACGTGGGAGAAAGAAGTACGAGATTTGAGAATGTTGTTCAAATACT
GCTCCAATGGAAAACAATCTCGACCAGACTGTCCCTCCATTTTTGATAGA
GTCCATCGTTATATGAAAGATTGGCAATGGCCAGCTTTGAGGGGAGAATT
TTTCCGGCGTTTTAAAGCTCCAATTCGTACGGCTTTTCAATCAATGGTCA
TGTTGATGTTTTCTTCCATGACCAAACGACCCTGGGTTAAAACATACAAA
GAAGCAAATGACTGGTATGATAATATCAGCCATGAATATTCAGAAGTcgg
gaaattttatgctgatttctcaaagaaaatccACGAAGAGCGATCATGGG
ATTTTTCCGCACCTGAAGTTTGTCAATACCGTAGATTCATGTGGAAAGAT
TTTGAACAACCTGCTTGTGAAACCAGATGGCGCGAAACCGACCCACCTGG
TGGCCCTAAGAACAAGCGATCAGCTGTCAATCATTTCATCGAATCCGAAC
GGGAAGTAAATATCCCAATTGGGTTAAAACAACGCGAGAAAAGATCAACT
GATAAACAGCTTCTAAGCAAAGCTCGAAAGTCAGATGCATCTCATGATTT
AAGTGAAATGcctaaaaagagagaaaaagatgacgatgatgacgatgatg
acgacgacgatgatgatAAATCCTCAGATAGCTCCAATAGCagcgaagaa
gaagaaaaagatccaTTTTTCAAAGCATTCGCTGGCAATAGTCAAGACCA
GGAAATCAAGATTGGTGGGTTCGCATCCGACTTTGAATTTATCATGAAAG
GGCGCTTCAAAGATGAAACAGCTGGCAAGGAGATAATTGTTGATCAACGC
TACATCAATGTGCGCGAGACAACGAAAGGGGAAGTTATCGAAGAGATGAT
TAGCGAGGCTTACGCAAAACGAACCGAATTAGTGAAATCGAAAGTTGCCG
AGATGGATAAATATGTTCAAGATACATACGGAACTATGCGTAAAGCTGAA
Ctcctctttttgaaaaatgttaagaaacaaattaagaaatggcaatcaaa
aaataatatttatattCCACAATAGACATTCTCGAGAGATGAGAATAATC
ATAAATTATTAGTAATTAGAAATTTCAAGACCTgcttaatgaaaaataaa
cttcaTTTAGGATTTACAGTCaattctcgctaattcgaacccAACAGGGA
atcttcgaattaaagagagtattttaagagggtttctacCTGAcgggaat
aagttcgaattatagaagatcgaataagcgagagtcgaCTGTACTGTACT
TCAAATATCCTGTCcactttgtcgtaattttgtGCTCTAAAAAAGGGAAC
AGAGCGTTAGTTAGTACtcataaaaagaaagtttctttccttagtaaaat
ttctttattttgtctAGCTGACATAACATTTACTTAATGGGATTTCACTT
CTTAATgcgcaaaataacaaaatttttatcCGCTTTAAAATACTCAgttg
caaaatttgaaacttttaagTTTATAATCTTATATAAGAGTTCCAACAAA
AGAAAACCGCTGTTACTCTGTTTTTGTAGAATGAAAAGCTAATCTGAAAA
ACAGGTCACATTCTAGGTAcagattttgattttaggttagaaccaatttt
tttcattttttgtttatttaatgAAACACATGAAATTCATTTAAAGGTAT
TGTTTttagataagagtgatatcgtttgcttactcatcgatttaaattca
caagctttttacattggattggcacggatgtggagcaagattgttcAGAA
AGAttatgcttatatcagcataatataacactAGGCAAtaactgtcctga
tatgaaacatgtgcctgatatgaaacgggcttatataaaaataaaacctt
taacgagAGATTGCCGATTTTAAAGAATCCAAATTTTAGATATGGAGGAA
TTGATTTTAATAAGAGTGAGAAGAGTTTGTAATTTGTAGGTCAAGTATAT
TGTAAATAGCATTACACGTACCCAGTCCTTTGTTATTTGTTATTTTATAC
AGTGAAGTCtcttttttgtggtttttcgtgaaaatcagcgaaaaaaaaca
gttaggttacacatcaggttagaaacttcatcatagtacccttcatgttc
agtcatttgtttggtcgttttctgtcggctaatgcgatctaaaaattatg
gtaattttaggacatgccataacttaccgaGTCGAGTTATAAAGGTCCGA
GTTAAAAAGACTCAACTGTGCATGAATATGATAGTTCTCACGATTgttat
caataaaatcaaagagtGATAGACGAGggtctgggtacgagattgtaaga
ttttttattattttcacctCTCCACGATACCCTATATTTAAGGACGTCCC
TATATTTAAGGTCCGGACCGTCCTTATATTTTTCCGTCGGAAAACACAGA
TATCTATATTTCTCCTATCCAGTAGATTAAATGAAGATCAGTG Coding sequence (CDS) from alignment at sc0000135_pilon:563443..566685+ >MSTRG.15387.1.p1 ID=MSTRG.15387.1.p1|Name=MSTRG.15387.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2586bp|location=Sequence derived from alignment at sc0000135_pilon:563443..566685+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTACTGCAGCTCTGGTAAATTTCGGATATGGGTTGAAAAGTAGTGC
TGATATTTATGCCAAACttgttgacgtcatcaaagaTAAAAGTGCCGACG
CCGAAAATGATTTTCTGGATAAACATTACTTcactgaaaataaaaATGAT
TCAATTTGGAAATACTCCATGGATGAAGCCGAGAAATTACTGAACCAAAA
ATATGACCTTGACGAGCTAGTCACGTGGGAGAAAGAAGTACGAGATTTGA
GAATGTTGTTCAAATACTGCTCCAATGGAAAACAATCTCGACCAGACTGT
CCCTCCATTTTTGATAGAGTCCATCGTTATATGAAAGATTGGCAATGGCC
AGCTTTGAGGGGAGAATTTTTCCGGCGTTTTAAAGCTCCAATTCGTACGG
CTTTTCAATCAATGGTCATGTTGATGTTTTCTTCCATGACCAAACGACCC
TGGGTTAAAACATACAAAGAAGCAAATGACTGGTATGATAATATCAGCCA
TGAATATTCAGAAGTcgggaaattttatgctgatttctcaaagaaaatcc
ACGAAGAGCGATCATGGGATTTTTCCGCACCTGAAGTTTGTCAATACCGT
AGATTCATGTGGAAAGATTTTGAACAACCTGCTTGTGAAACCAGATGGCG
CGAAACCGACCCACCTGGTGGCCCTAAGAACAAGCGATCAGCTGTCAATC
ATTTCATCGAATCCGAACGGGAAGTAAATATCCCAATTGGGTTAAAACAA
CGCGAGAAAAGATCAACTGATAAACAGCTTCTAAGCAAAGCTCGAAAGTC
AGATGCATCTCATGATTTAAGTGAAATGcctaaaaagagagaaaaagatg
acgatgatgacgatgatgacgacgacgatgatgatAAATCCTCAGATAGC
TCCAATAGCagcgaagaagaagaaaaagatccaTTTTTCAAAGCATTCGC
TGGCAATAGTCAAGACCAGGAAATCAAGATTGGTGGGTTCGCATCCGACT
TTGAATTTATCATGAAAGGGCGCTTCAAAGATGAAACAGCTGGCAAGGAG
ATAATTGTTGATCAACGCTACATCAATGTGCGCGAGACAACGAAAGGGGA
AGTTATCGAAGAGATGATTAGCGAGGCTTACGCAAAACGAACCGAATTAG
TGAAATCGAAAGTTGCCGAGATGGATAAATATGTTCAAGATACATACGGA
ACTATGCGTAAAGCTGAACtcctctttttgaaaaatgttaagaaacaaat
taagaaatggcaatcaaaaaataatatttatattCCACAATAGATGGCTA
CTGCAGCTCTGGTAAATTTCGGATATGGGTTGAAAAGTAGTGCTGATATT
TATGCCAAACttgttgacgtcatcaaagaTAAAAGTGCCGACGCCGAAAA
TGATTTTCTGGATAAACATTACTTcactgaaaataaaaATGATTCAATTT
GGAAATACTCCATGGATGAAGCCGAGAAATTACTGAACCAAAAATATGAC
CTTGACGAGCTAGTCACGTGGGAGAAAGAAGTACGAGATTTGAGAATGTT
GTTCAAATACTGCTCCAATGGAAAACAATCTCGACCAGACTGTCCCTCCA
TTTTTGATAGAGTCCATCGTTATATGAAAGATTGGCAATGGCCAGCTTTG
AGGGGAGAATTTTTCCGGCGTTTTAAAGCTCCAATTCGTACGGCTTTTCA
ATCAATGGTCATGTTGATGTTTTCTTCCATGACCAAACGACCCTGGGTTA
AAACATACAAAGAAGCAAATGACTGGTATGATAATATCAGCCATGAATAT
TCAGAAGTcgggaaattttatgctgatttctcaaagaaaatccACGAAGA
GCGATCATGGGATTTTTCCGCACCTGAAGTTTGTCAATACCGTAGATTCA
TGTGGAAAGATTTTGAACAACCTGCTTGTGAAACCAGATGGCGCGAAACC
GACCCACCTGGTGGCCCTAAGAACAAGCGATCAGCTGTCAATCATTTCAT
CGAATCCGAACGGGAAGTAAATATCCCAATTGGGTTAAAACAACGCGAGA
AAAGATCAACTGATAAACAGCTTCTAAGCAAAGCTCGAAAGTCAGATGCA
TCTCATGATTTAAGTGAAATGcctaaaaagagagaaaaagatgacgatga
tgacgatgatgacgacgacgatgatgatAAATCCTCAGATAGCTCCAATA
GCagcgaagaagaagaaaaagatccaTTTTTCAAAGCATTCGCTGGCAAT
AGTCAAGACCAGGAAATCAAGATTGGTGGGTTCGCATCCGACTTTGAATT
TATCATGAAAGGGCGCTTCAAAGATGAAACAGCTGGCAAGGAGATAATTG
TTGATCAACGCTACATCAATGTGCGCGAGACAACGAAAGGGGAAGTTATC
GAAGAGATGATTAGCGAGGCTTACGCAAAACGAACCGAATTAGTGAAATC
GAAAGTTGCCGAGATGGATAAATATGTTCAAGATACATACGGAACTATGC
GTAAAGCTGAACtcctctttttgaaaaatgttaagaaacaaattaagaaa
tggcaatcaaaaaataatatttatattCCACAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:563443..566685 + |
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