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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:413466..421951+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15378.1.p2 ID=MSTRG.15378.1.p2|Name=MSTRG.15378.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8486bp|location=Sequence derived from alignment at sc0000135_pilon:413466..421951+ (Clytia hemisphaerica_ch_hm2_pilon)
taagatgAGTaaaaaaaaTGGTCATCGGTATTAGATAAAATAGCTacaca
cacacatacacagacatacaGATTGAAATACTTCGTGAATGGTAGCCATG
GTAACCTAAACAATAAAGATAATGACAGAACATtggtttttaagttttct
cattttgagtttaggtaagatttcactaatttttttattcgttttcAATT
CATTTGTCATATTTCTAAATCTACTTAATAGCCAGATAATTTGTTGCGGC
AATGTAAtttttttGCGTGCTTATCATGAGTCGTTAAAATGAACATAAAC
TACTCAGGCGTGTTGCAGCACATCCGgttaaatttgtcaaattttaccGG
AACGTTTCCTCATCGTAAAGAGGCGTTCTAAAATATTCAAAGACTATCGA
AAACTCCTCTTAGCCCTATTATTATTATCAAGCTTTTTGGGTGTTCCTAT
TATCAAAGAGGGTGTTTTCCACCACCCGCCTTCAATAGCTTTTGATCTAG
AGACCCACTTTTGAGGGCTGAAACTTTTGATCCaagaaatatatgaaaaa
tctgaatacatatttgaaataagggaaattcgaaaaataagaaaagcgta
aattgaagatttttgtgcCTGTAgataaaatgttaatttttttcttcttt
atttttatctttattttcaaaattttaaaaagattttaaaacctaaaaat
attctgcttataattatctttccaacggggTATTATTTTTCATAATGTCT
TTTTTCCTTCAAGAGCGATGAATGAAAATGTGCAGACtctaagggctctg
accatagtcagaaaatcgGTTACAGTATGtgatatgaaaataaaactttt
gtttcagGTTCCTTGACATTTTTAACATAAAATACCTTCACAAATTGTTT
GTTAATTTACTATGTGAAGAGTAATTAataatttaattacaaaaatgacg
ttatgaactttaaaaagacgttaataaaatgtCATAAtataccctctttt
acaaaaaatgctaagttttaatgggtaatcaACCTATTTTGTTTCGAATT
GTTTTTaattgtccgcaaagaattgcactgtttgaaattttgcggaaata
ttttcttgattGATGTATCAAAAGATATGAGTGTATTTGTATGAAATATT
TCGAAGAAAATCGGgcaaaaaccactattttcaagattttgaaacaaaga
agcttttacaaaaattttccgcaaatcTCTTTTTAGTTTGGGTAAAgatg
agtctgctaaatgacgcgccttacgcgcccacgcgccctcatATTTTTAA
CGCACCTTACGCGCCTCACACGCCCACGCGCCCTAAAATGTTACGCGCCC
TGGTAATTTGAcacgccctaaaaatttgacgcgccctaaaatatcgacgc
gccctaaaaaatcgacgcgccctgataatttgacacTACCTAAGTAACTG
ACAGTAATGAGAACAATTACTTCGACTTTATTGATTTATCCTTCATATTC
AAACGTCGGGTGAGTGTCTTATAAAGAATGTTGTTCTTATCCCAGTGTCG
TCGTTCTATGAGCGATTGAGGATACAAACCTTTTTCCCGAGTATTTTATT
ACCAAGCCATAATTCgtgttttcagtacatgatttttttctacgccactg
cagtaatcaaattattattttaaatcaCTCTTTTCCAAATTGAGATGTAA
ATTTAACAAAGACAGCGACAATGGAAAACGTTTCACAAATTCCCAAGTCA
AAGATGATTACAAAAAGTTGGGTTTTCTGTGAAGGGACAAATTTGTGCAT
TCCCCcctgtaaattgaatagaaataacGTGTAGCATGCACAAATTCTAT
GAAATAGACTAATAAAGCGTACATAAAGTGTACAGCCGATAAATGAAACG
GGTCGACTTTAGGCTAATCTCTTAAGAAATGATCATTTTGCTAACGCCGA
CATTCTTTTATATACCAACCATGTATGATTAGACCGGTCCCATTATTCCG
TCCGTCAAAACCGTCGAAAACTTAAGGCACATCAAAACCCTAGGGCGTGT
CGAAAtcttagggcgcgtcaaattttcaaggcgcgtcgaaatcatagggc
gtgtcaaattttcaaggcgcgtcgaaatcataggacgcgtcaaattttca
aggcgcgtcaggcgcgaaggcgcgttagaaatatgagagggcgcgtgggc
gcgtaaggcgcgtcatttagcagactcgggTAAAGGTACACCACCTAGCC
CAAAACATTCTTCAAAATGtatttcttcgccgaaaataaggtcctcGAAG
TTGAAATACTCTCCTTCGCAAAAGtcctcattttcttcttcatggatttt
tttcatttcgattttcaaaatttcagataACATGTCATAGTTTTGTTAGC
TACTTCAGGCAGAACCTTACATTTTGTACATGGCAAacatgaaaaattca
ctatggtcagagcccttgattatattaaaagtcaaaaagattCAGAGTCT
CAATAAAgattttcagtgagctattagcaaaagaaaCGCTAGGGTGGTGG
AAAACACTCCCTGGTAAAGATAGggttaaaacttaaaaaacacaacacaa
aaaaaactcCATAGCATGCTTTCGATACAAGTCCAAACAGATATAATGGC
AAAACATCTTTTGTCGATTTTTCGTTCTTTATAAAAGTAAAAGGTACATT
TATTCGTGCTATTGCGTAATCAGCTAACCTTCAACGCCCTCGATAGCCCA
ACAGTatactttaaaaataaataaatttctttttataggATCTGTGGCCA
CACTCAAAACGATTCACATCTCGCATAATGGACAAAGCAAAGACAACAGC
ACGTGTGGCCAGATATCACAACCGTGTTTTCATCTTGATTACGGAATCAA
CACCATCTCCATGGATACAAATATAATTTCATTGGATGCAAACTACAATT
ACAATTACAACAGAACCATTGAATTACCTCATAGTTTAACATTGACAAGT
TACTATGACAACGAGGATGGACCACCACCAAAAGCATCCTTGAATATAAC
AATGGTGAATACCGATGAAAAAGTGATATTCAAAGCACGCGGAGATTTAT
CACTGTATAACTTAAACGTATCCGTCAACGCTGAAAGCTTGGTATCCATC
TTCCAAGTtcaaagtgacacttttcaaCATATTGAGATCCATGATTCTGA
GATTTTTCTTATTGAGAGATCCGGGAACACTGATCTTCTAAGTTCTCCGT
ACAATGCGAATATaaaattcaacaaaacaaaactcttTTATCACTTAATA
GATCAAGATAATGTCAAACGAGTTATGACAACAAACCAGCAAAGCAGAGA
AGCTTTGTTTCGGTATACAATGGCTACAAAACGTAACTCTACCCTTGTCT
ACGGGAAGAGATCCCGACACTTAAAACAAAAgctaaatgaaaaagttttg
ccTTCATCTGCAAAGCATAACCTACATTCAGAAGAAGGAAACCCCTCAGT
CATTTCCCAACATCAGCCGCCAAGAGAAATAGTATCAAACGAATTTACTA
ACATGCGTGACAACGATAAAGACTTTAAATTCAGCAGAAGCGATGGAAAA
CAATTTACTACCACACCAGTCTATGACCAACTTATGACAACATACAGGAT
AAATTCTACTACTCACTACCGCAACAAAGGTAGAACaggatttcaaaaga
aaataacaattcaaatgtatgattcagtttttcatgctgataGTTATATG
ggagatttcaaatttcaaattgagcCTTTAGGTGAAGTCTCTGTTAACCT
GTTCGTGTCAAACTGTTGTTTTACCCAAGTTAAAATGAATATCTTCCCAA
CGGCACCGCCAACTAAGGTGGTTTTCAAAGATAGCTTGTTTGAATCTACT
GTTATATTTGTTGATTTCAGCCACGTACTATTTAAAACTGAGCAACTAGT
AAACACTTTAAACATGGTAAATTGCACTGGAGACATATTGATATTTAGTG
CAAACTTTGATGATGATTCAAATTGTCAAATATCCGATTCCAATTTCACA
AACTCAAAGTTTGATTTAACCAGCATGTTAATATACACTGAAGTCAAAGT
CAGCGTTCACGTATGGAATTGTGTATTTTCAGAAGCCACTGTTGATCAAC
AACTAAAAGTTAGACTCCGTGGAAGCTACAATGGTGCAGCTCCGCATAAA
AATATCACGATCATGGACTCGTTCTTCCAAAGATGTACTTATGGGGCACT
TGTGGTGAGCGGATTTGCATTCAAACTAATCCGGACAAGATTTGCCGATA
ATTTTATTGACGGTCTTGATTACAAAACTGGAGTTTCAGCTGCACTCACT
GTCCAATCCGACTCCATTGAAATTGAGAACTGTACATTTATAAACAACAC
AGCTCCAAACGGCATTCCAAACTCGTTAAAGACCGAATTTATATCAggga
aatattttcatatatcAAATACCCACTTTGAGTCAGGAAAAATCTCCATC
GGAGATGTTAACAACGTCGCTTTTATATCAGAGATCAATGTTGGGTATAT
ATTTCAGAATGTATCATTTTACTGCGCTAAACCAGACTATTATCTACTCA
TATACGGGGGAACAGAGCAATCCTTCGAAGCTAAAATGATCACATGCACG
CGATGCGGAAGGCTGACATACAACGCATTTGATCAATCACACGTCAATTA
CCATGGATGTTTGAAAAAGAGAGTCCACAATATCACATGCTATGCTTGTC
CATATCAAGCCTCGTGCGGCAACGGAATCCAAAGTCGTGGCAACTACTGG
GGAACATCAAATGCGACTGGATTTGTTACTTTCTATCCATGTCCACCTTT
TTATTGCTGCTCCTCGTTACGTACCTGTTCATCCTATAACACCTGTGTAA
ACAACCGCCAAGGACGCCTATGTGGTGCTTGCAAAGATGGCTACTCACTC
AGCATTTTCAATAAGTGTGTACGCACTAAACATTGCAACTATAATTGGTT
TTGGTTGGCGTATAGTATACTATGTGTCTTGGCGTTTATTTTCTTCCTGT
ATTTCAAAGATGTTTTACGATTCATGAAAATGAAACTTTGTGCTTTGTTC
TGTAGTAGCAATGATGCTGATCTACCACAACCACAACAAAACAGAAATAT
AGAAGAATCACTAACTAATTCACCGACGCTGAGTACAAATACGGACGATC
CTATAAACACCATTTCAAATAGCAGCAATGCAGTAAACGTGTCGATGGAC
GGCGACAATGAAAGCATCGTAGCCAATAAAACTGCTCAACAACAACAAGG
TACTTTCTCCGGTACTATCAAGAtagctttctttttttatcaagCAGCCT
CAATCATCCGCATCAATGCATCTGCAAAAGCAGAATACACAATCCCAATC
ATTCTTAATTTGATCACCTCGTTTTTCAATATAAAGATCGATGATAGTTC
ATCCTCTGGCAGTTCCGCCATAGATGTTTGTCCACTCCAAACATCTAATA
CCACAGTCATCAAGGTCATCAGCTTAAGCACTATTCTTTCATGTTGGCTC
CTGTTTCTTGCGGCTATTTTGATTACATACGTATATCGACATATCAAGAA
TCGTTTTTGCCAACGACAGCCAATTGACCAAAACGAGGCTCATGACCATG
GAGAGCAATCACACAGCCTTGCATCTCGTTTTATAAACAGATTAAAAGGT
AGCTATGTGCAGTTGCTCTTGTTCGCTTATGCCAGCATTGCAAAGTTCTG
TTTGCAGGCCGTGCACTGCATCGAGATTAACGGTCATAAATATCTATACT
ACCAAGCTGAGCAGAAATGCTACCAAGGATGGCAAATGCTCGTATTCGGG
ATCATATTCTCGTGGGTTGTTCCGTTCCCATTCGTCTTGTATTTTGCATG
TCGATGGTTGAGAGACAGATCGATCAGCGCTAATGGTTTCTTGATTATGG
TGACATTTCCACCGGCTATGTTAGTGTATGTTTCAATGTCGATGATGTTA
AGATGTTGCAACAGTTTTAAACATACCAGATTATTGCCTGCTGTTGATAA
TGATCAGTCGAATATAGAAAGAGAAAGTATTTTACTGGTTTTGAACGAAC
CATTCCGCGTAAATGTTACGACAGAGGAAGAAGACACCGAGACAGACGAA
ACTCAAGAGGATGACAACAATCAATTAATTTGGGAACCAGTTCTTATCCT
ACGTCGATTGGTTTTGACCATATCAGCAACGTTCTTTATGTCACCAGTTC
AGAAACTTTATCCTGCTGCTTTGCTGTTAATAGTATATACTCTGCATGAT
CATTTGAAGCAACCTTACAGTGATAAACGATTGAATCTGGCTCATTTGGT
ATCCATGCTGTTGTTGGTTATCCTAGTTATGATTAACACGTTCTGGGCAT
ATTCCGataatattgatttgattcaagATCGACAATTCTACTTGATGGGC
AGTGTTCTCTTGTATTTTGAACTTTTCATAATGTTGGCTCCAGTTTTATT
GGTTGTACTCTATGGGATTGTTAAATTGGGGCGGTTCGTTTACAAAcgtt
attttcttaaaaaacaagACTGATTATTTGTTGttgtaaagtctgtctca
atataatctgcagcggagacgaaaaaggctgtaactcttgatagaaCTCG
AATTAAACAGCGGTTTTGtacttgttgaaaagatattcaaggGTGGAATA
TTACCatacagaaaaaaatgaaaaatgaagatgaaaaatgaagaagaagt
aTACCAACTTTATAAAAGTCAGTGCTATAATTACTGTTATCACAacagtg
attctttgatcttagaacatcatcactgtgaagactAAAGTATATCACTG
ATTGactttaaaaatcatcaaaaaacaacaaagcccATTTCATAGTCAAC
CAGACAGAACTTTTAAGCTGtgttttttgactgaataaatattttttgaa
aaaaactctaATAATGACAATCATAGGACAATTcgacaaaaagttgattt
ttttcttcttcatttttcattttcattttccaaatttttttgattttttt
ctgttttataaCATTCCCACTCCTTATTGTCTTTTCAaaaagcacaaaac
cgctagtTAATTcgaattttaccaaaatttacAGCCTGTTGATAAGCGTA
CCGTTTCGGAAAAGATTATCTTAGTTGACAAGGATGAAATTGTAAATAGT
GATTCTACTACAGCTGAACTTTTTGATACTTATTTCAATGGTATAACTAA
GACACTGGACATATATCAGTGGTCGCAATATGCCGAGCCGATCTACGACG
ATCCGGTGCTCAATACTCAGATCATCCTAgcattataaaaatcaaaagta
tTTTAGCTGGTAACTCTCCTTCGAGTTTACAAAAACTGACACTGAAACTG
TCCACAAATTAGTTATGTCATTGAATAGTAAAAAATCTACATCTGGGGAA
ATAAGCACCAAAATCCTACAGAAGTCTGCTAATATCTGTTCTTTTGCACT
CAAAGATTGCTTCACCTCTTGTCTCGACAAGACTATTTTCCTGGAATCCT
TAAAACGAGCTACAATTACCCCGGTTCTTAAAGAAGGCAATCCGACGAGT
GTTAAAAACTACAGACCTATTAGCATACTTCCTACAGTATccaaagtatt
tgaaaaaatcattgcccAACAATTAAAtccttttttagaaaactgTTTTT
TCAGATTTACTGTGTGGCTTTCGAAAAGAACATACAGTACACAACATGCT
CTATTGCGATTATTACATCTCTGGCAAAGGGCACTTGATGATTCAAATAT
TGTGGGTACAATACTTATGGATTTATCAAAAGCTTACGATtgtttacccc
ctgatttactTATTGCAAAATTAGCAGCATATGGTGTTAACCACAATAGT
CTACTCTTTATATATGATTATTTGATAAACCGTTACCATAGAGTCAAAAT
TGGAAATAGTCTGAGTAGCTTCTTATCTATTAGTATGGGCGTCCCTCAGG
GATCCATTTTAGGCCCAAttctttttaacatatttttgaaTAATCTCTTA
CTATCTGACCTTGAAGCAGAACTCTGTAACTTTGCTGATGACAACACCCT
TTTCGCAATCGCTAAAGCCCTTGCTGAAATTATCGAAATTCAAGATATTT
TGTACTGGGGTAAAATCAATGGGCTTGTTGCCAATCCAGGAAAGTTCGAA
GTTATGTTTCTTGGTAGATTTGAGCCTATATCTACTTTTAATATAGGAAA
TATCaaagttaaagttaaaaatCAGGTCAAACTTTTAGGTATCTAATATT
GTTAAATCTTTATATTGATAATAACTTTAACTCCCACGTTGAATTAAAAT
GCCAGTCGGTGGGAAATAAAATCAGCGTTCTTCGGCGCATCCGTCCCTTC
GTTTCTCTTAAAACAGCGAAGGCCTTGTTCCACGcctatattttttctaa
ttttaattaTTGTCCATTAATTTGGATGAATTTTGT Coding sequence (CDS) from alignment at sc0000135_pilon:413466..421951+ >MSTRG.15378.1.p2 ID=MSTRG.15378.1.p2|Name=MSTRG.15378.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=882bp|location=Sequence derived from alignment at sc0000135_pilon:413466..421951+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATTGAATAGTAAAAAATCTACATCTGGGGAAATAAGCACCAAAAT
CCTACAGAAGTCTGCTAATATCTGTTCTTTTGCACTCAAAGATTGCTTCA
CCTCTTGTCTCGACAAGACTATTTTCCTGGAATCCTTAAAACGAGCTACA
ATTACCCCGGTTCTTAAAGAAGGCAATCCGACGAGTGTTAAAAACTACAG
ACCTATTAGCATACTTCCTACAGTATccaaagtatttgaaaaaatcattg
cccAACAATTAAAtccttttttagaaaactgTTTTTTCAGATTTACTGTG
TGGCTTTCGAAAAGAACATACAGTACACAACATGCTCTATTGCGATTATT
ACATCTCTGGCAAAGGGCACTTGATGATTCAAATATTGTGGGTACAATAC
TTATGGATTTATCAAAAGCTTACGATtgtttaccccctgatttactTATT
GCAAAATTAGCAGCATATGGTGTTAACCACAATAGTCTACTCTTTATATA
TGATTATTTGATAAACCGTTACCATAGAGTCAAAATTGGAAATAGTCTGA
GTAGCTTCTTATCTATTAGTATGGGCGTCCCTCAGGGATCCATTTTAGGC
CCAAttctttttaacatatttttgaaTAATCTCTTACTATCTGACCTTGA
AGCAGAACTCTGTAACTTTGCTGATGACAACACCCTTTTCGCAATCGCTA
AAGCCCTTGCTGAAATTATCGAAATTCAAGATATTTTGTACTGGGGTAAA
ATCAATGGGCTTGTTGCCAATCCAGGAAAGTTCGAAGTTATGTTTCTTGG
TAGATTTGAGCCTATATCTACTTTTAATATAGGAAATATCaaagttaaag
ttaaaaatCAGGTCAAACTTTTAGGTATCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:413466..421951 + |
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