|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000134_pilon:887375..889287- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15342.1.p1 ID=MSTRG.15342.1.p1|Name=MSTRG.15342.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1913bp|location=Sequence derived from alignment at sc0000134_pilon:887375..889287- (Clytia hemisphaerica_ch_hm2_pilon)
CATGGGAAGTTCAATCATTTATCATCAACCCTGGTGAACGTTATGATTTC
ATGTTGACTGCCAATCAAAAGGTGGATAATTATTGGATCAGAGTCAAGTC
CATTCAAGTAAGCAATTCTTTTAGTCCTTATAACCCGAAACCGAAAATAT
AACGAAAATATATTTAAAAATAACAAAGGACCCTATTCTTGGTCAGGCTA
GATATATGTAGCTGTACATTTTATAAAAAAAACAAGTTACGAGAGATTAT
CATTTACTCCTTGCTTACTAGATTAAAACTGCGCAGAAAACATGGAGTGA
TGGCCGAGTTGTCTAAAGTGTTAGCGCCATCGATTTCAAATACCCACTCC
TCTAAACGTTTTTTCAGCTCCAGGTAGCCAAGCTGGATTCACGTGAACCA
CATTTAAAAATCGACAGACTGTCTGAAAGTCCTAGATTACAGCTGACCCT
GTCCAAATCAATCGCATTTCATCAAGTTGTTTGTAATCTCGGATATTTTG
TAACTAATCCTAATATCCTTTGTATTAATACAGGTTGGTGAGGATTACAA
GCGCAATTACGCCTTGGCAATATTGCATTACAAAGGTAGTGGTGTGCATG
ATGAACCAACAACACAAAAACAGGATTGTGTGAGAGATGGCTGCAAAGTG
ATCAATTGTCCCTTTAAATATTACAAGAGTGATGAAAATACGGAATGCAT
AACCATAGATGAATTAGAGAATGCAAATGCAGCTGATGTACCACCAGAAT
ACATAGACGATAGTATGGAACATTTCCTGAATTTCGGATTCCCTGAATCT
GATGGTCAATCACCAGGAGCAGTCAATGGTAAAAAGTTCAAATTCCCAGC
AGTGGATCCTTTGATACAATGGTCACCTAATTGTGCACGAAAGGAATGTG
GACCATCGAAAACATGTTATTGCCAACACGAGCTGATTCTTCCTTACAAT
AAAACCGTGCAGATTGTGATGACAAATGTTGGTAATGGTGCAGGCTATTC
ACACCCTATTCACATGCATGGGCATCAATTCTATGTCATGAAGGTAGGAT
ATGCAAATCAAAACAAAACAACAGGTATAGTCAGTAATTACTACTTACAA
AACAACACAGATATCTACTGTAGTACTGCCCAATGTAACGACCCAGCATG
GGCAAATTCAACATGGCGACATGGCCATGTACCAGACATGAATAAATATC
CACCTCGCAAAGATACGCTAATGATCCCAACAGGTGGGTATGCTGTGGTA
CGGATACGCGCAAATAATCCGGGCTGGTGGTTTATGCATTGTCATATTGA
AATGCATTTGTTGGCTGGAATGGCATTGATGATAAATGAAGCACCAAACG
AATTGCTAAAAATTACACGACCAACTGATCTTCCAAAATGTGAAAATTTG
GTCAAGCTTACATGGAATATAACAGCAGCATCAACAACACAAGCAACACG
TAAGTTTTACTTTACCCACCCTCTAGAGTGATTACTTCCTCGAAATCATA
TTCAAAATTTCTCCTTGATACATCTTTGATCCCATATTTTCAGATAGAGA
TAAAGTTATCTTGGTTAAAACAAACTGCAAACAAAGCAGGGCAAATTAAT
TTAGTTGGGGCGTTCCTTTGCTTATAGTGATATTGTGATAAAGCCTTTGA
TACAGTCAACATTGGATCTGTCAACTTAATATCGTTTATTTTCTTTTAGC
GCTAACAGAGCCTTCCCGAGGTGGAAATGGAGACGATTGGAAAGATGCAA
CGATTATAGTAGCAGTTATTGCTGGTGTAGTGTTGATCATTTTGATCGTC
TTCATTGTCTATACTTGTTGTTGTAGAAGAACGAAAGGCAAAGAAAGTCA
AAGTCATGAAATGCGATAACTTGCGAAAAACTGATTATGGAATACATAAA
TTAAAGTAAATCA Coding sequence (CDS) from alignment at sc0000134_pilon:887375..889287- >MSTRG.15342.1.p1 ID=MSTRG.15342.1.p1|Name=MSTRG.15342.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3573bp|location=Sequence derived from alignment at sc0000134_pilon:887375..889287- (Clytia hemisphaerica_ch_hm2_pilon)
CGCTAACAGAGCCTTCCCGAGGTGGAAATGGAGACGATTGGAAAGATGCA
ACGATTATAGTAGCAGTTATTGCTGGTGTAGTGTTGATCATTTTGATCGT
CTTCATTGTCTATACTTGTTGTTGTAGAAGAACGAAAGGCAAAGAAAGTC
AAAGTCATGAAATGCGATAAGTTGGTGAGGATTACAAGCGCAATTACGCC
TTGGCAATATTGCATTACAAAGGTAGTGGTGTGCATGATGAACCAACAAC
ACAAAAACAGGATTGTGTGAGAGATGGCTGCAAAGTGATCAATTGTCCCT
TTAAATATTACAAGAGTGATGAAAATACGGAATGCATAACCATAGATGAA
TTAGAGAATGCAAATGCAGCTGATGTACCACCAGAATACATAGACGATAG
TATGGAACATTTCCTGAATTTCGGATTCCCTGAATCTGATGGTCAATCAC
CAGGAGCAGTCAATGGTAAAAAGTTCAAATTCCCAGCAGTGGATCCTTTG
ATACAATGGTCACCTAATTGTGCACGAAAGGAATGTGGACCATCGAAAAC
ATGTTATTGCCAACACGAGCTGATTCTTCCTTACAATAAAACCGTGCAGA
TTGTGATGACAAATGTTGGTAATGGTGCAGGCTATTCACACCCTATTCAC
ATGCATGGGCATCAATTCTATGTCATGAAGGTAGGATATGCAAATCAAAA
CAAAACAACAGGTATAGTCAGTAATTACTACTTACAAAACAACACAGATA
TCTACTGTAGTACTGCCCAATGTAACGACCCAGCATGGGCAAATTCAACA
TGGCGACATGGCCATGTACCAGACATGAATAAATATCCACCTCGCAAAGA
TACGCTAATGATCCCAACAGGTGGGTATGCTGTGGTACGGATACGCGCAA
ATAATCCGGGCTGGTGGTTTATGCATTGTCATATTGAAATGCATTTGTTG
GCTGGAATGGCATTGATGATAAATGAAGCACCAAACGAATTGCTAAAAAT
TACACGACCAACTGATCTTCCAAAATGTGAAAATTTGGTCAAGCTTACAT
GGAATATAACAGCAGCATCAACAACACAAGCAACACTGGGAAGTTCAATC
ATTTATCATCAACCCTGGTGAACGTTATGATTTCATGTTGACTGCCAATC
AAAAGGTGGATAATTATTGGATCAGAGTCAAGTCCATTCAACGCTAACAG
AGCCTTCCCGAGGTGGAAATGGAGACGATTGGAAAGATGCAACGATTATA
GTAGCAGTTATTGCTGGTGTAGTGTTGATCATTTTGATCGTCTTCATTGT
CTATACTTGTTGTTGTAGAAGAACGAAAGGCAAAGAAAGTCAAAGTCATG
AAATGCGATAAGTTGGTGAGGATTACAAGCGCAATTACGCCTTGGCAATA
TTGCATTACAAAGGTAGTGGTGTGCATGATGAACCAACAACACAAAAACA
GGATTGTGTGAGAGATGGCTGCAAAGTGATCAATTGTCCCTTTAAATATT
ACAAGAGTGATGAAAATACGGAATGCATAACCATAGATGAATTAGAGAAT
GCAAATGCAGCTGATGTACCACCAGAATACATAGACGATAGTATGGAACA
TTTCCTGAATTTCGGATTCCCTGAATCTGATGGTCAATCACCAGGAGCAG
TCAATGGTAAAAAGTTCAAATTCCCAGCAGTGGATCCTTTGATACAATGG
TCACCTAATTGTGCACGAAAGGAATGTGGACCATCGAAAACATGTTATTG
CCAACACGAGCTGATTCTTCCTTACAATAAAACCGTGCAGATTGTGATGA
CAAATGTTGGTAATGGTGCAGGCTATTCACACCCTATTCACATGCATGGG
CATCAATTCTATGTCATGAAGGTAGGATATGCAAATCAAAACAAAACAAC
AGGTATAGTCAGTAATTACTACTTACAAAACAACACAGATATCTACTGTA
GTACTGCCCAATGTAACGACCCAGCATGGGCAAATTCAACATGGCGACAT
GGCCATGTACCAGACATGAATAAATATCCACCTCGCAAAGATACGCTAAT
GATCCCAACAGGTGGGTATGCTGTGGTACGGATACGCGCAAATAATCCGG
GCTGGTGGTTTATGCATTGTCATATTGAAATGCATTTGTTGGCTGGAATG
GCATTGATGATAAATGAAGCACCAAACGAATTGCTAAAAATTACACGACC
AACTGATCTTCCAAAATGTGAAAATTTGGTCAAGCTTACATGGAATATAA
CAGCAGCATCAACAACACAAGCAACACTGGGAAGTTCAATCATTTATCAT
CAACCCTGGTGAACGTTATGATTTCATGTTGACTGCCAATCAAAAGGTGG
ATAATTATTGGATCAGAGTCAAGTCCATTCAACGCTAACAGAGCCTTCCC
GAGGTGGAAATGGAGACGATTGGAAAGATGCAACGATTATAGTAGCAGTT
ATTGCTGGTGTAGTGTTGATCATTTTGATCGTCTTCATTGTCTATACTTG
TTGTTGTAGAAGAACGAAAGGCAAAGAAAGTCAAAGTCATGAAATGCGAT
AAGTTGGTGAGGATTACAAGCGCAATTACGCCTTGGCAATATTGCATTAC
AAAGGTAGTGGTGTGCATGATGAACCAACAACACAAAAACAGGATTGTGT
GAGAGATGGCTGCAAAGTGATCAATTGTCCCTTTAAATATTACAAGAGTG
ATGAAAATACGGAATGCATAACCATAGATGAATTAGAGAATGCAAATGCA
GCTGATGTACCACCAGAATACATAGACGATAGTATGGAACATTTCCTGAA
TTTCGGATTCCCTGAATCTGATGGTCAATCACCAGGAGCAGTCAATGGTA
AAAAGTTCAAATTCCCAGCAGTGGATCCTTTGATACAATGGTCACCTAAT
TGTGCACGAAAGGAATGTGGACCATCGAAAACATGTTATTGCCAACACGA
GCTGATTCTTCCTTACAATAAAACCGTGCAGATTGTGATGACAAATGTTG
GTAATGGTGCAGGCTATTCACACCCTATTCACATGCATGGGCATCAATTC
TATGTCATGAAGGTAGGATATGCAAATCAAAACAAAACAACAGGTATAGT
CAGTAATTACTACTTACAAAACAACACAGATATCTACTGTAGTACTGCCC
AATGTAACGACCCAGCATGGGCAAATTCAACATGGCGACATGGCCATGTA
CCAGACATGAATAAATATCCACCTCGCAAAGATACGCTAATGATCCCAAC
AGGTGGGTATGCTGTGGTACGGATACGCGCAAATAATCCGGGCTGGTGGT
TTATGCATTGTCATATTGAAATGCATTTGTTGGCTGGAATGGCATTGATG
ATAAATGAAGCACCAAACGAATTGCTAAAAATTACACGACCAACTGATCT
TCCAAAATGTGAAAATTTGGTCAAGCTTACATGGAATATAACAGCAGCAT
CAACAACACAAGCAACACTGGGAAGTTCAATCATTTATCATCAACCCTGG
TGAACGTTATGATTTCATGTTGACTGCCAATCAAAAGGTGGATAATTATT
GGATCAGAGTCAAGTCCATTCAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000134_pilon | genome | sc0000134_pilon:887375..889287 - |
|
