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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000133_pilon:725860..730241+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15266.2.p1 ID=MSTRG.15266.2.p1|Name=MSTRG.15266.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4382bp|location=Sequence derived from alignment at sc0000133_pilon:725860..730241+ (Clytia hemisphaerica_ch_hm2_pilon)
CCCCATTTCTCTGTTTCCCGctgaatttttatcttttgatttaaaaagga
ATTACATATAGGGTATAATGCTAGCTGAATGATAATTCTGACTTGATTGA
ACATAATGGTGGAGAAACTTGGTGAAAAGACTGCTTTATGGCAGCGATTA
TATGTTGCTGTAGGTATAAACAAATTGTTATTTTCTTAAGAATGCAACGT
TTCTTAGatataaaacaaacaaagacaATTTTTATGCGTGcggagataaa
aaaaattattgacatATGTAAGGAAAACAATCTTGATGTGTCTTGACATC
CTTGAGTTAAATGGTACGAGTGGTGgtataaaaattttttgagaaaggTC
GCTGATAATTTTAGTTTATATTTCgtagaaataaagaaaagagaaagatg
gtaccgaaaagccaaaaacaaaacaaacttgaaaTCGTGGAATACAACAT
TGAAAAGCATTCTGGGGAAGTacaaaaaattttagatgaacACTTAATAC
CAATTTACTTAAAACGTATGGAAATCACACAAGATGAAAGATTGAAATAT
GCACATATTGAAAATGTCTTACATCCTAACCTAGCAAAGAATCccaaatt
cgaaaatttttctatGGTAACTTTAGACGAGGCTGGTAAAGTTGTTGGTC
TCGGATTAAGCTACATGGTAACTAAGCAAGACTTTCAGGAGACTTTTATT
GACCTTAATCTTCGGGTCGTGAATGACTCAAGCTACAAAGAAAGTATCCG
AAAATATTGCCAACACAGATATGCAGTTTGTTATCCACTTGCAAGATTTT
TTGACGAATACAATATTGATCAGATGGTTTATACAGAAGATGCCGTTGTC
TTACCCCAATATAGAGGTCGAGGAATAAATAATAATATGTATGAATTAAT
GATGGCGGAGTTTGGTCACAAGCATGCTTTCTTTGCCGAAGAGATGATGC
CTGTACAAAATATTGTGACGTCAGGAGGACTCAAACATGAGTTAGATGTC
ATAGGAACCTGGGACTCAGATGGATGGTTATGTATTGACCGACAATTATC
TTATGATGGTTATCTTTGCCCGTTATTTTTTAAACCACTTACACATGTAC
ATAAATCTAAATTGTAATTTGTAGCTCTACCCTAAacacctctgtgtcac
agacccgctaggACCCgtagccccactggaaaatttgccaaaaaattcgT
CCCcagtaggaaaataccctgaaatttcagccccactgggaatttgactt
tgatttcatccccattcgagatccaatgtttaaaaattgcacttcaaaac
catcctcactggattttttaaccttggaacaaaaattaaatagaatttct
atccccattgagattgcaatatgaatttttatccccactgaggaaaaagt
tccactggggctgtgtgACAGGGGTGTCTCTAAATATGTGTCTTTTTCTT
CACAGAATTTTTCTATATTCTTTTACTTGTCAGAAACACATGATTCAGAT
TTGCAAATCTTGACCAACATTCAGTAAACTCTTCGTTGGAAAAAAGAATC
GTGAATTTAAGGCTATAGGAgttgtaatttgaaaattttgattcatCATT
ACTCTGtaccaatttttttaattttgttgataagaatttttttacatttt
agatttGTCAAGAATACAATGATTTGCATTGTATTTGCATACAATGATTT
GCATATCATGACCAATAATTCCgataatttcaataatttgtATTGACAGG
GTATTCTACACATCAAGGTAGACTTAAACTTTGTATCAGACTTAAAATTT
ACCTAAGCCATAGACGTTTATCAGATGTTTACTATCTCGCTACGTTTTGC
TTTTAGTACAAAAATAACGACATACAGGTCCTTTcttagtctggagatcc
atactctatATTCAAACTTAAAacacataagcaaaaatcccatcaaaagc
tactcattgagagtatggtatttttgatccagtttgaatttgtttacatt
tggtttgaatttcatgccaaaaaagccgttgataaggttagccaatcagg
ttcgcgcacttccaatcaaaacagtaatatcacgtgatttcaacaattgt
ttaacagccaatagaattctgcgaccagattGTTGGGCATCaacaaaaat
acccggctactctgttatttctatcgATATTTCTacattattattcgttt
taactaaatgctatactttgaaaccacacgaacagagtagacgggtctcc
cagctagtcCTTTCTTGGTGTCTTAGTACTTTAAAAATTCAAGAAGTAGT
TTGCACTGTGCAAGGCTGAAGAATCATATAGCTTGGTCTAACTATATTGT
TCACGGATCCCTCAAATCCATACAGTAATTTTGTAAAAGGCggaaaaata
acgaaataaaTTTGTTAAATCTTCAAACTTGTTTCTTTACTGACATTGTA
ATTATCAAGCTGAATACAACATTTTTGTACAAATATTAGTAATTTtaatt
aaaatagaaataaattaAAGACTATCATTAAACAGACAGAACATGTCTTT
TACTTTTCACAATACAaccttgtgtcacagacccgctgggaccccagccc
cactggaaaatttagcaaaaatttcgtccccggtgagaagataccctaaa
atttcagccccactgggaaattgacttttatatcatccccattcgaaatt
cagtgtttaaaaattgcacttcaaaaccatccccactgaattttttaacc
ttggaacaatagaatttctatcaccattgggatttcaataggcaTTTTTA
TCCCTGATGAGAAAAAggtccaccggggctgtgagacaggggtaccGGGT
TGGTGCGAGTCTCCGGGTATGTCTTTCTTAGGAATCGgcagttcttattt
tttggcacttatAGTCTGTTCTTATATCCTGTTCTTTTCGCCAGGGTAAA
ATTGAGATACGCTAGCcttattttactactttaacccttaatttcctaaa
aattcAGCTAGCCCAGACTCatttttgttcttaaattgttcttattttct
gagcctcattgttcttataaaactattctcataaaaaagtacaTAAAGCT
TtgttcacatgtacgtaaaatttgaAGTTTGCTTACGTAACTCTACCGTA
ACTTCAAAGTAAGATTTAACGTGCATGTCAAAAAAGCATAATGTGTATCA
TTAATCCCgaaattattttaatattataaattatGTATGTGATATATAGA
ACTATAACTTTGATTTAATATGAAAAGGCATGGGTGGTCTAAAATATAAT
GGGCAAACATAGCCATCATAAGATAATTGTCTATCAACAGTTAACGTGTT
GTCTGTGTCCCACGTTCCTATAGCTTCTAACTCATGTTTGAGTCCACCTG
ACACCATACTTTGTACAGGGATCATGCCTTCGCCAAATATAGCATATTGA
TGTCCAAATTTCTCGTAAATGATATCATTCATGCGTTTATTGACACCTTT
TCCTCTGTATTTAGGTACAACAACGCTATCCTCAATACTAAGCATCTTGT
CTAGGTTATATTCGTCAAAATATTTGGTCAATTGCTGGCATATTGCGTAT
CTATGTTGGCAATATTTTCGGATACTTTCTTTGTAGCTTAAGTTGTTTAC
AATCTTAAGATTAATGTCGATAAATTCCTCCAGGTATTGTTGCTTGGTTA
CCAAGTAGCTTAATCCGAGACCAACGACTTTACCAGATTCATCTAAAACC
ACcacagaaaatttttcgaatttggaATCCTTTGCTAAATTAGGAtgtaa
aatatcttcaacctcTGCATATTTCAATCTTTCATCTTGTGTGATTCCCA
TACGTTTGTAATAAGTTGGTACTAAGTATTCGTCCAAAAGTTTTTGTACT
TCCCGAGAATGCTTTTCAATATTGTATTCCACGATTTCCAAGCCTTCTAT
CTTGTTTTTGAATATCATCGTGATCGAATATTTTCCTTTCCACTaaaaaa
aTGAATCCCTAATCTCTTCATTAATTTTAACAACTTTATACCATCGTTCA
AGAACGTCAAGACGTGTTCCCTTCCTCttacgtcaaaaaatgttaaCCTC
AGAAATTAAAGTTattgttttgtattttgtataagaaactttgtattttt
ataaagGAATTACCCTCATATACACTTCTCTTTCGTGCTTTTCAGCACGT
TTATCCAATTTCCCATGCCTCTTGGAAGGCAAATTGAGAAATACAAATCA
AGGGAGGTTGTTTACAAATTAGGGTGCTTAGGATGCTGCAATTCAAAGAT
ATCTTCGAAATGAAGCTGTTAGCTTCGcttgtttattttgatattttaag
aaTAAGAATAGTATCCCAACCCAAGATTTTCC Coding sequence (CDS) from alignment at sc0000133_pilon:725860..730241+ >MSTRG.15266.2.p1 ID=MSTRG.15266.2.p1|Name=MSTRG.15266.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=720bp|location=Sequence derived from alignment at sc0000133_pilon:725860..730241+ (Clytia hemisphaerica_ch_hm2_pilon)
atggtaccgaaaagccaaaaacaaaacaaacttgaaaTCGTGGAATACAA
CATTGAAAAGCATTCTGGGGAAGTacaaaaaattttagatgaacACTTAA
TACCAATTTACTTAAAACGTATGGAAATCACACAAGATGAAAGATTGAAA
TATGCACATATTGAAAATGTCTTACATCCTAACCTAGCAAAGAATCccaa
attcgaaaatttttctatGGTAACTTTAGACGAGGCTGGTAAAGTTGTTG
GTCTCGGATTAAGCTACATGGTAACTAAGCAAGACTTTCAGGAGACTTTT
ATTGACCTTAATCTTCGGGTCGTGAATGACTCAAGCTACAAAGAAAGTAT
CCGAAAATATTGCCAACACAGATATGCAGTTTGTTATCCACTTGCAAGAT
TTTTTGACGAATACAATATTGATCAGATGGTTTATACAGAAGATGCCGTT
GTCTTACCCCAATATAGAGGTCGAGGAATAAATAATAATATGTATGAATT
AATGATGGCGGAGTTTGGTCACAAGCATGCTTTCTTTGCCGAAGAGATGA
TGCCTGTACAAAATATTGTGACGTCAGGAGGACTCAAACATGAGTTAGAT
GTCATAGGAACCTGGGACTCAGATGGATGGTTATGTATTGACCGACAATT
ATCTTATGATGGTTATCTTTGCCCGTTATTTTTTAAACCACTTACACATG
TACATAAATCTAAATTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133_pilon | genome | sc0000133_pilon:725860..730241 + |
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