|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000133_pilon:510283..514718- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15252.1.p1 ID=MSTRG.15252.1.p1|Name=MSTRG.15252.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4436bp|location=Sequence derived from alignment at sc0000133_pilon:510283..514718- (Clytia hemisphaerica_ch_hm2_pilon)
TAAAATCGTCTGCTAGTAGTAGCAAATTTGTGTAAGCACAAATTCTACAC
TTTTTGTCTGTTTTTTTTTAACAAATTTAACCGAGACACGCATAGAGGAA
GATATCTTTCGCCATGACTTCGGGTAAGTACTGTTGTTTTAAAATATATT
CCAATGTGGAAATTCGGAAATTTTGCCAACCTAAGGAAAATTTTATCATA
AATAGAGTTTTTGTAAATTCAAAAAGTAAGTTAAGGGATTTAATTTCGGC
TTCATAGCCAACCTCTTTTTAGGAAATTAGCATCAGAAGCAGCCGGCGGA
GAGATCTTTTGATAGAATTTGAATTAAGTAGCAATTTTGCGCTTGTTGAA
AAGACAAACAGGAGTGGAATATTGTCATAAAGAAAAAACTCAAAAAAAAT
CAGAAAATAAAGATTGAAATGAAGAAGAAGAAAATCAACTTCTTCAATAA
TTGTGCTATTTAACATCAATTAATGTGAAAAAACTTTTCAAAAATTTATT
ACATCGAAAGATATAGTCCAAAGTTTATCAGTGATTGATAATCAAAAAAA
AAAGAGCCCTTTTTTAAGTCAACCAGGGCAAGTTTGGGCTGTACCTTTTT
GATTGTATGAATATTTTAAAAAAATCTTTTTCGCATTTATGACGTTCTAA
GATTGAAGAGTTTTGATACAAAAATGAAGATCATAAAATTATTCTACAAG
ATGTTGATTTTTTCTTCTTATTTTTTATCTTCGTTTTCCATTTTTTGAAT
TATTTTCTTTTTGATATATTCCACTCTGGATTATCTTTTTAACGAGCACA
AAACCGCTAACTAATTCAAAATCTATCAAAAGTTCTTGAGGTTTGAAAAA
ACACTGCCAGTTAATTTGAACATAGTATAAGAAAGCCGCGGCTTCTATAC
TATGATTGAAATAGGGCTTAGAAGAACAAAATGTTATAACTTCAATGTTT
TTATACAAATTATGTGTTCTGATTTCTAGAAACCTTTATCGCACTACTTG
TCTCCTTAAACTTATTATTACGTTAGGTGTTCCAAAATCTAGAAAAACTT
TTACCAGAGATACTTGTGATATTTCTTTTCTCCACGAAAGATGCATTCTC
AAAATTCTAGGGTTACTAGGCAACATTACATCGATCTTCTCTTGATTATA
CCGGTGTCAATTAAAAGATGTGTTCTGAAGCTTTCTAGGGTTACCTGGGG
GCTACCTAACAATAAGAACACGTTAGATGACCTTGTTTATACCCCTGTCT
CGTCAGAACACATCATTCTCTCCAGCTGATTGATTCGCTAGATCTGATCA
AACAGATCAAAACTTCTAGCCTGAAATTGCTCTCAGAACACACGGAAAAA
ATGTCGCGCTTGCCGACTGCTTTTGAGCATTGTCCGTTTTCTACTGTATG
CTCAAAACTATAGATTAATTTCTGAATTAACTTTTTCCTCGATAATTTTC
TGTAAATATTTCTGCCCCGAGGAAAGGGGTACTTAGCAGTGCCATAGGAG
ACATTTTCATATTGGGGGGCTGAAGTTTTAGTGACAACGCGAGGGCCAAC
CCGAGGGGGAAAATTTTGAAAATTTGAGCTCTAGATTGCTTGAAAAGCAC
TCAAAAGTCAGCTGTTTTTGTTTAAAAGACAATTATGACAAATTAAAAAG
AAAAACTGTGCATTTTGCAAATAACCATTTTTGAAAAATTATTGGGGGGG
GGGGCATAGTTAGTTTCCACCATAAAATATTTGCTTCCAAAAACCTTCAA
ATTAAAAAAGGAATTCCTTAGCCATCGTGTGTAGACATTTTGGGTTTGAT
TTTGAAAGACTTCAAATTTGAAAATCGATTGAATAAATGTTTCTCGTAAA
AATTGAAAATGAAGTCTTAGTCTAAATTTCAAAATAATCTTCCATATGCG
ATTCTAAGTAACAATGGGAAGCGGTGGGAAAATCGGGAAATAGGGTTTTG
GACTTTCCTTAACTCACCTGAGATCATAAAAAACGAGTTTCCCAATAAGG
TATCCAGGACAGGAAGGCACTATGATAAGGTATATTAAAAAAAGCTAACT
TCGGAAAATTTTTCATTTTTGTGTTTGACGTCAAAGCCCCCAGATATAAA
TGTATGTCCAAAATTGTAACGTCAATTCTTCGCATTTAAATATATCATCA
CTATTTATTTTCAATAATGGACAGAAAATCCTTATTTCTAAATACTTTGA
ACAGTTAAGAACTATACCAACATAATGTATTATTTTATGTAAATCAAAAC
AGTGTTACTTTTTTATTTTTTAAAGGTATAATGGAGGAAAGCCAGCTTCG
CACAAGCACCATTGAACTCATTTCATCAATCCATGGCACCCAAAGACGTG
CTGAACGTGCCATAGATGTCAAGGATCTCAAATCAGCAATAAAACACGGC
AAAAAGGAGCCTCAAATACGATATCGCAATGGTCAGAAACAGATTCGCTA
TAAATATACGTTTGCTGATGTTGTCTATATCACTGATGAATTCAGTCGAC
TAGAGATAACAAGTTATGTTTTACCGCTACCCTTGGATAATTACCACGTC
CTGGATACTGAGGAGCATCAATACCTTGCTGCAAAGAGGCGAATGACTGA
AAACCCCGGCTCTATAACTTCGCATGCTGTATTTGTTGTCGATTGCAGCG
GTTCAATGAAGAACAGTGATGTTGTTGCACACCGGTGCCGGCTGGATGCT
GTTCAGTACGGCATTGCTGTGGAGTTCATTGCAAAACGTTTGCATAATCC
ATCATCTGGTGTCACTCAATTAGATGTGGTGACCATAATCGAAATGAGAG
ATGAAGCCAAAGTTGTGTTCGAAAAAGAACCAGTTAGTTGGGTGTTGTAC
AATAAATTGGTAGACCATGCAAAGCATAGCAAACCATCTTCACATGGCAA
TTATTATCCAGCTCTTCAAACCGCACGTCAGATGTTAAGTGATGGTGACC
ATCCAAATCTAGCCTTGTTACTTTTTTTTCTCTCTGATGGCCGACCAAGC
GACGAGAGCTTCAATATCAGTATTTCAAATATCTTGTGTGAAGCTCAAAT
GATTGGCAAAGTCTTCAAAAAGCGATTGAATTTCGGCATGGTTGCATATG
GTAGGCCTTTGGAAGATATGAGTGTGTTGGATCAAATGGCAACATGGATG
TCAATGTACGGAGCTGTTGGCAAATTTCATCGCTCTGATCTCAAGAAGGT
GGATTCTCTTTCAACCTCCATTGCAACTATGGCAAGTACATTGACGAGCA
CCCGTACTATGCTGACAGCAGCTCGCACAGATCGAATGCAACAGAAAACC
TTTAACATAACAGAATTCAGCAGGAATGTCATGTCACCTCAGAAGGATTG
GGAAGTTAAAACGGTGACCGCTAACTATTTGACTCGTTACGAACTAGTCA
GGTCGCAAACATTGAAAAACTTTATTTGGAAAGAGATTCCATTGGTTAGC
CCTGAAGCTGTTGGTATCTCCTTCTCTAAGAACCCTTTTGGGAAAGGAGC
AGAGCGTCTTGTCTATCAACTCTGCGAAATCGATAAACGAAAGAGAAAAG
TCGGTCAAAGTTTGGTCATGAAGAATAGCAAATATGAAGGGAATTATGAT
TTCCGAAAATATCACGAACCGTTTTGTAAGACTCAGAAGATTGCTGCCAA
CACAGCTTTAAGGTTCAATCAACGTTTAGAAAGAATGCCACAGATCACCA
GTAAAGTGCCCCGAGTGAAGTTTTTGCAATGTTACGTTTACGCGTTTTAC
GATGGTTATGACGAGTTGAATATTTTAGCAGAGCGAGAGATCGATCATCA
TCAATACACCAAATGGAATGATAACACTGGGGGAGTTCTCGGTCAGCGTC
GACAACAAGTCAAAACTATTCATGATCAGATCATCGAGGAGGAGGAAGAA
GAAGAAGAAGATGATATTTCAGGTGAAGTTGAACCAACAGCTGATTCTGA
AGATGAGGAAAACTTCTATGGTGTTCGTGACTTAACCCAACAACCAAGAA
CCGCTGTTCAACAACGACATCAAAGAGTACAGATGGTCGATATCCTTGAT
GAAGAAGTCCCACAGGCTTTTACTCATTTCTCTTACACGTGGAGTAACAG
AGAGAAGATGGTTTGTGATCTACAAGGTGTTTTGAATAAAACTACGAGAG
AATTTGAGTTTACCGATCCTGCTATTCATTACGCGTCCAAAAGTGGACGT
CGACACGTTTACGGACGTACGGACAAAGGGAAAGATGGAATGCGTGAATT
CTTCAAAACACATAAATGCAACAAACTTTGTGAAGCGTTGGGAATTTCAC
AAGAACGCATGTAAAACTTTTTCAAATAGAGAGAAATTCGTAACCATAAA
GATTTCCTACCATGCACTGTTAAAAGTAACAATAACATTATAATATCATA
TATTTTGAATTTAGAAAAGAACGGCTTCATCAAACG Coding sequence (CDS) from alignment at sc0000133_pilon:510283..514718- >MSTRG.15252.1.p1 ID=MSTRG.15252.1.p1|Name=MSTRG.15252.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4098bp|location=Sequence derived from alignment at sc0000133_pilon:510283..514718- (Clytia hemisphaerica_ch_hm2_pilon)
GTATAATGGAGGAAAGCCAGCTTCGCACAAGCACCATTGAACTCATTTCA
TCAATCCATGGCACCCAAAGACGTGCTGAACGTGCCATAGATGTCAAGGA
TCTCAAATCAGCAATAAAACACGGCAAAAAGGAGCCTCAAATACGATATC
GCAATGGTCAGAAACAGATTCGCTATAAATATACGTTTGCTGATGTTGTC
TATATCACTGATGAATTCAGTCGACTAGAGATAACAAGTTATGTTTTACC
GCTACCCTTGGATAATTACCACGTCCTGGATACTGAGGAGCATCAATACC
TTGCTGCAAAGAGGCGAATGACTGAAAACCCCGGCTCTATAACTTCGCAT
GCTGTATTTGTTGTCGATTGCAGCGGTTCAATGAAGAACAGTGATGTTGT
TGCACACCGGTGCCGGCTGGATGCTGTTCAGTACGGCATTGCTGTGGAGT
TCATTGCAAAACGTTTGCATAATCCATCATCTGGTGTCACTCAATTAGAT
GTGGTGACCATAATCGAAATGAGAGATGAAGCCAAAGTTGTGTTCGAAAA
AGAACCAGTTAGTTGGGTGTTGTACAATAAATTGGTAGACCATGCAAAGC
ATAGCAAACCATCTTCACATGGCAATTATTATCCAGCTCTTCAAACCGCA
CGTCAGATGTTAAGTGATGGTGACCATCCAAATCTAGCCTTGTTACTTTT
TTTTCTCTCTGATGGCCGACCAAGCGACGAGAGCTTCAATATCAGTATTT
CAAATATCTTGTGTGAAGCTCAAATGATTGGCAAAGTCTTCAAAAAGCGA
TTGAATTTCGGCATGGTTGCATATGGTAGGCCTTTGGAAGATATGAGTGT
GTTGGATCAAATGGCAACATGGATGTCAATGTACGGAGCTGTTGGCAAAT
TTCATCGCTCTGATCTCAAGAAGGTGGATTCTCTTTCAACCTCCATTGCA
ACTATGGCAAGTACATTGACGAGCACCCGTACTATGCTGACAGCAGCTCG
CACAGATCGAATGCAACAGAAAACCTTTAACATAACAGAATTCAGCAGGA
ATGTCATGTCACCTCAGAAGGATTGGGAAGTTAAAACGGTGACCGCTAAC
TATTTGACTCGTTACGAACTAGTCAGGTCGCAAACATTGAAAAACTTTAT
TTGGAAAGAGATTCCATTGGTTAGCCCTGAAGCTGTTGGTATCTCCTTCT
CTAAGAACCCTTTTGGGAAAGGAGCAGAGCGTCTTGTCTATCAACTCTGC
GAAATCGATAAACGAAAGAGAAAAGTCGGTCAAAGTTTGGTCATGAAGAA
TAGCAAATATGAAGGGAATTATGATTTCCGAAAATATCACGAACCGTTTT
GTAAGACTCAGAAGATTGCTGCCAACACAGCTTTAAGGTTCAATCAACGT
TTAGAAAGAATGCCACAGATCACCAGTAAAGTGCCCCGAGTGAAGTTTTT
GCAATGTTACGTTTACGCGTTTTACGATGGTTATGACGAGTTGAATATTT
TAGCAGAGCGAGAGATCGATCATCATCAATACACCAAATGGAATGATAAC
ACTGGGGGAGTTCTCGGTCAGCGTCGACAACAAGTCAAAACTATTCATGA
TCAGATCATCGAGGAGGAGGAAGAAGAAGAAGAAGATGATATTTCAGGTG
AAGTTGAACCAACAGCTGATTCTGAAGATGAGGAAAACTTCTATGGTGTT
CGTGACTTAACCCAACAACCAAGAACCGCTGTTCAACAACGACATCAAAG
AGTACAGATGGTCGATATCCTTGATGAAGAAGTCCCACAGGCTTTTACTC
ATTTCTCTTACACGTGGAGTAACAGAGAGAAGATGGTTTGTGATCTACAA
GGTGTTTTGAATAAAACTACGAGAGAATTTGAGTTTACCGATCCTGCTAT
TCATTACGCGTCCAAAAGTGGACGTCGACACGTTTACGGACGTACGGACA
AAGGGAAAGATGGAATGCGTGAATTCTTCAAAACACATAAATGCAACAAA
CTTTGTGAAGCGTTGGGAATTTCACAAGAACGCATGTAAATGACTTCGGG
TATAATGGAGGAAAGCCAGCTTCGCACAAGCACCATTGAACTCATTTCAT
CAATCCATGGCACCCAAAGACGTGCTGAACGTGCCATAGATGTCAAGGAT
CTCAAATCAGCAATAAAACACGGCAAAAAGGAGCCTCAAATACGATATCG
CAATGGTCAGAAACAGATTCGCTATAAATATACGTTTGCTGATGTTGTCT
ATATCACTGATGAATTCAGTCGACTAGAGATAACAAGTTATGTTTTACCG
CTACCCTTGGATAATTACCACGTCCTGGATACTGAGGAGCATCAATACCT
TGCTGCAAAGAGGCGAATGACTGAAAACCCCGGCTCTATAACTTCGCATG
CTGTATTTGTTGTCGATTGCAGCGGTTCAATGAAGAACAGTGATGTTGTT
GCACACCGGTGCCGGCTGGATGCTGTTCAGTACGGCATTGCTGTGGAGTT
CATTGCAAAACGTTTGCATAATCCATCATCTGGTGTCACTCAATTAGATG
TGGTGACCATAATCGAAATGAGAGATGAAGCCAAAGTTGTGTTCGAAAAA
GAACCAGTTAGTTGGGTGTTGTACAATAAATTGGTAGACCATGCAAAGCA
TAGCAAACCATCTTCACATGGCAATTATTATCCAGCTCTTCAAACCGCAC
GTCAGATGTTAAGTGATGGTGACCATCCAAATCTAGCCTTGTTACTTTTT
TTTCTCTCTGATGGCCGACCAAGCGACGAGAGCTTCAATATCAGTATTTC
AAATATCTTGTGTGAAGCTCAAATGATTGGCAAAGTCTTCAAAAAGCGAT
TGAATTTCGGCATGGTTGCATATGGTAGGCCTTTGGAAGATATGAGTGTG
TTGGATCAAATGGCAACATGGATGTCAATGTACGGAGCTGTTGGCAAATT
TCATCGCTCTGATCTCAAGAAGGTGGATTCTCTTTCAACCTCCATTGCAA
CTATGGCAAGTACATTGACGAGCACCCGTACTATGCTGACAGCAGCTCGC
ACAGATCGAATGCAACAGAAAACCTTTAACATAACAGAATTCAGCAGGAA
TGTCATGTCACCTCAGAAGGATTGGGAAGTTAAAACGGTGACCGCTAACT
ATTTGACTCGTTACGAACTAGTCAGGTCGCAAACATTGAAAAACTTTATT
TGGAAAGAGATTCCATTGGTTAGCCCTGAAGCTGTTGGTATCTCCTTCTC
TAAGAACCCTTTTGGGAAAGGAGCAGAGCGTCTTGTCTATCAACTCTGCG
AAATCGATAAACGAAAGAGAAAAGTCGGTCAAAGTTTGGTCATGAAGAAT
AGCAAATATGAAGGGAATTATGATTTCCGAAAATATCACGAACCGTTTTG
TAAGACTCAGAAGATTGCTGCCAACACAGCTTTAAGGTTCAATCAACGTT
TAGAAAGAATGCCACAGATCACCAGTAAAGTGCCCCGAGTGAAGTTTTTG
CAATGTTACGTTTACGCGTTTTACGATGGTTATGACGAGTTGAATATTTT
AGCAGAGCGAGAGATCGATCATCATCAATACACCAAATGGAATGATAACA
CTGGGGGAGTTCTCGGTCAGCGTCGACAACAAGTCAAAACTATTCATGAT
CAGATCATCGAGGAGGAGGAAGAAGAAGAAGAAGATGATATTTCAGGTGA
AGTTGAACCAACAGCTGATTCTGAAGATGAGGAAAACTTCTATGGTGTTC
GTGACTTAACCCAACAACCAAGAACCGCTGTTCAACAACGACATCAAAGA
GTACAGATGGTCGATATCCTTGATGAAGAAGTCCCACAGGCTTTTACTCA
TTTCTCTTACACGTGGAGTAACAGAGAGAAGATGGTTTGTGATCTACAAG
GTGTTTTGAATAAAACTACGAGAGAATTTGAGTTTACCGATCCTGCTATT
CATTACGCGTCCAAAAGTGGACGTCGACACGTTTACGGACGTACGGACAA
AGGGAAAGATGGAATGCGTGAATTCTTCAAAACACATAAATGCAACAAAC
TTTGTGAAGCGTTGGGAATTTCACAAGAACGCATGTAAATGACTTCGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000133_pilon | genome | sc0000133_pilon:510283..514718 - |
|
