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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000132_pilon:767519..771400+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15200.1.p1 ID=MSTRG.15200.1.p1|Name=MSTRG.15200.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3882bp|location=Sequence derived from alignment at sc0000132_pilon:767519..771400+ (Clytia hemisphaerica_ch_hm2_pilon)
TGACATTCGAAGTACACgcagaaatcgaaagtgaaaacaATGAAAGCTAT
ATGAGAAGGACGGAAAGGAAGGAATATTTGAAAGGTACTTGGGTGTAATA
TTGGTGGTGGTCAACAGTGAAGGAGCTACTTTTAGTGCTATGTCTTCTGG
TGAAAGAAAAGACTCAATGAAACAAATCGCCCAGAGTGTTTGTAGAATTA
TTGAAGAAGCGAAGGGAAATatattcaaaagaaaatgtcttcaaattaTG
GAGGTAAGTGTATCTGGGAGAGAAGACACTCGATCTGAAAATGATATGTT
CAAATTACAGTAGTCAGTTTGGCTGGATCAGTTTAGACGAGAGCTTACAT
CGGTTTTAATTAACTGGTCATCGGGGAAAAAGGGGTACAGGattgtgccg
ctggtcaggaaGCCTTTTGCCCCTCCaacctccatgagtcccaggtaggg
tcgtaaaaacatcaaaatagaaaaatcagttcctcgcagggtaccttttt
cagtcAGGGAGATCCCTCGATTGTGGTAgtagaattttcttttcaaaagg
gACACCCTGATTCGAACGTCTTTTCAAAGAGACAAACTGATTCGAACGTC
TATTTAAAGGGATAAATTGATTCGAACGTCTATTTAAAGGGATAAACTGA
TTCGAACGTCTATTTAAAGGGATAAACTGATTCGAACGTCTATTTAAAGG
GATAAACTGATTCGAACGTCTATTTAAAGGGATAAACTGATTCGAACGTC
TATTTAAAGGGATAAACTGATTCGAACGTCTATTTAAAGCGAATTTTCCC
CgtggtattcatgatatgcaccactgcaatcgAATTTATTATCTTTGAAA
CCAGAGTTGATCCAAAGACAAAATTTGACACACACAGACCTCACATATAA
AAAAGTAcattaatgggataaaatttcgcggggacttaatttcgtgggtg
gcactattgggtggcaatattttcacaattttgtatctttatactgtcaa
atcatgcatattggttgttgaaatacacattatttgcgttttttttttat
gcaagtaaccatttaaaaaatatttatttgagttttgattaaaaatattt
cgcagatgaggcccttccaaatctctattgggatttaatttcgtggattt
tcgcggatgacacccaatccgcaaaatccgcgaaatttaatccccgcgaa
agtttaaaTTGAAAGTTTAGATTGATATTTGTAAAAGAAGAAGACACGAC
TATCGATATTTCGACGGAAATtaacaattttcttgtttttaggCAAATGA
GCCTATATAACATTGTCTAAATAACCGATAATAGGCTAAACAACCAACTA
TCGGCTAATGTGAACATATCCCTGACTGCCTAAGGACTGTTACTACGATG
GTGTATGAAAATTCTAGTTCATACACACGTTCATTGTCGAAATACCGGCG
ACAATTTTGCTTGCTTTTACAAGAATGCATTTTTAAAATCTATCagtttg
ttaaattttgcggtttgcGTGATGTTGCGATTGGGACTTTTCTCTAGCAT
GATtgcgtgatttggaaattttttcttcgtgattgcgtgatcagaggtca
aaacgtgatcgtgatttgagaaattcttgagccgtgatacgtgatttgga
cttttttcaaagggatgcatAAAAATgatgatccaattttttttgctgat
ttgcgtgatcgtgactgatgataaaaaattacataatttcgtgatcagag
ttaccgctggaAGCTTTTTTATCTATGATGATACCTGACTTAACAATACA
TCAAGGTGGTTGCTGCTTTTGGCATGCTTTGAATATCTAACCTGtttttt
tATAGAGGTCGGTGATGATGAGGCTTCTGGCTCTGATATACACTGAAATT
GTACTACGGTTTTCATTTTAGGTCGATGAATTTCCTGATTTCGAAAAGAA
GGTTTCATCTCGTTTGAACAACCTTTCTAAACGACGCTACAGACGTGGTT
TGCGTATTGAAAAGGTAAATACTCAATACAATATTATTCAGACAACCTAA
CCAGAGACAGGCAGCTCATATTTTgctaaataataaaaataagatgACAG
GAATTGTGCATCGCTCTCCCCAATAGCTAGACGTGTGACCTATTTGTTTC
TCGTGTTTTTCCCCAGCGCATTTTAAACAATACAAACATACCGGGGGCTA
GTTGCACcttctaaaaatttcaaatcgaaaTTAGTGTTAGCTCCGAAAGA
AGTGCTCCTATAAAACTGTAAAGCATTATTTCCTGAATTATTATCCTaga
ttgaagatgaagaaaattcgcaaaagaAAACAGCCACGAAGAAGTCACAA
GGATATTCTCCTATAAGAAAACGATGTAGAAGAGATCCACTAAAACTGCC
CAATACTAATAATATACCTCCCGAGAATGAAAATGCTCCGAAACTTGAAA
CAATGTTGATGGATCAGGATGTCCAATCCACAGAAAATGACGTAAGTGCT
TTTGTGAAAGAAGCTTTGCAGGAGCAAACAGCACCATATTATCCTGCCGG
ATCAGAACAGAGGAATTGGTCTCAAAGAAGTAATGAAAACGTTAATTGGG
TAATTAAAGAGGGAGATGGGCCGATGAATTTATCTCCGTCGTGTGTCGAT
GTTTCAAAATTATGTGATTTTATTAACGGGGCTGAAAATCATCAAATTGA
TATTGATGCTTGGTTAACGAATCAGGAAGACTCTCAAGAAAAAAGTCTGA
GAAGTGAAAAAGTAAATCAAGACGAGTTGGTTAtggatgattttttgaaa
ttagatCAACCTGAAGTAAGTCAGAGAGTTTCTGGCATAGATATAAGCAC
TTTTTCAGATCGCAACAAGATGTCTACAATTCAATCTGTTGTAAAGAATA
AGGGTATGTTAGATGATTTTGAAATTGTGTTTCCTGGTTCTCAAGAGTCG
ATTCTGAATCAACAAGAAAATGGTTCAGACTATAGGGAAAAGCAAATGAC
CCAAAAAGAACAGATTTGTTTTAAATTGAATCAACGTATCAAAGCCAGGA
TTCAAAATGGGCCAGCCAGTTATCCAAATCAGAGTGTCGGAGTCGTTAAA
CAAACGAACAGTATCAAAGAAAACCTGAAGAATAAGATTCTCTCAAGCCA
AAAATATCTCTATaacaaagttcaaaaaagtgAAGCAGGGAAAGCCGGtt
ttaattttgagaaaagttcCAGTTTTCTTACATCAGAAGATTTCATTATG
GCAGAGTGGGATGAGCCAACAGGAATGAAAATCGCTTCCGATGGTAGTTA
CCCGCCATCCTCCCAGTATGAAATGGTATCATCAGAAATCCAAGcaagtt
ttaaaaaaagttttggcgtTGGAGATGCTTGCGTGGATAGCGAAGATTGG
CTTGACGAGTTTGAAAAAGACGATTTTTGGGGAAATGGTGACGCTCATAA
AGAGAAAGaattaaataatgtttttaatttaGAGACTGTTGACCTTTTCC
GTGTACCTAATTGATCTATATTCTGATTAACATAAAATTACCATCTCTTA
GCATGcgaattttcgaaaaagccCTGTTTCACAGCTCCGGTGGAGAAGAA
GCTGGGTTTCAATTCATTTATTTTGTCCCTATTGGTAATTCAATTCCCGA
AACTGTTCAGAGGACCTGAATTTCAAGTGTTTTAGGCGTAAGGCAAgacc
aaaataatttattgttctaaaggTCCGACCGACCAACATTTATTCTGCAG
AACTATAGGATGGACTTGATAAGTTTTTTGCAGATATTTTTAAGTTGaaa
aattcatctcagaacctaaataaattaaaaaatttaaaatatcataatgg
aaatGGCAAGAAAGTTGCTCATtgattaaaag Coding sequence (CDS) from alignment at sc0000132_pilon:767519..771400+ >MSTRG.15200.1.p1 ID=MSTRG.15200.1.p1|Name=MSTRG.15200.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4266bp|location=Sequence derived from alignment at sc0000132_pilon:767519..771400+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTCTGGTGAAAGAAAAGACTCAATGAAACAAATCGCCCAGAGTGT
TTGTAGAATTATTGAAGAAGCGAAGGGAAATatattcaaaagaaaatgtc
ttcaaattaTGGAGGTCGATGAATTTCCTGATTTCGAAAAGAAGGTTTCA
TCTCGTTTGAACAACCTTTCTAAACGACGCTACAGACGTGGTTTGCGTAT
TGAAAAGattgaagatgaagaaaattcgcaaaagaAAACAGCCACGAAGA
AGTCACAAGGATATTCTCCTATAAGAAAACGATGTAGAAGAGATCCACTA
AAACTGCCCAATACTAATAATATACCTCCCGAGAATGAAAATGCTCCGAA
ACTTGAAACAATGTTGATGGATCAGGATGTCCAATCCACAGAAAATGACG
TAAGTGCTTTTGTGAAAGAAGCTTTGCAGGAGCAAACAGCACCATATTAT
CCTGCCGGATCAGAACAGAGGAATTGGTCTCAAAGAAGTAATGAAAACGT
TAATTGGGTAATTAAAGAGGGAGATGGGCCGATGAATTTATCTCCGTCGT
GTGTCGATGTTTCAAAATTATGTGATTTTATTAACGGGGCTGAAAATCAT
CAAATTGATATTGATGCTTGGTTAACGAATCAGGAAGACTCTCAAGAAAA
AAGTCTGAGAAGTGAAAAAGTAAATCAAGACGAGTTGGTTAtggatgatt
ttttgaaattagatCAACCTGAAGTAAGTCAGAGAGTTTCTGGCATAGAT
ATAAGCACTTTTTCAGATCGCAACAAGATGTCTACAATTCAATCTGTTGT
AAAGAATAAGGGTATGTTAGATGATTTTGAAATTGTGTTTCCTGGTTCTC
AAGAGTCGATTCTGAATCAACAAGAAAATGGTTCAGACTATAGGGAAAAG
CAAATGACCCAAAAAGAACAGATTTGTTTTAAATTGAATCAACGTATCAA
AGCCAGGATTCAAAATGGGCCAGCCAGTTATCCAAATCAGAGTGTCGGAG
TCGTTAAACAAACGAACAGTATCAAAGAAAACCTGAAGAATAAGATTCTC
TCAAGCCAAAAATATCTCTATaacaaagttcaaaaaagtgAAGCAGGGAA
AGCCGGttttaattttgagaaaagttcCAGTTTTCTTACATCAGAAGATT
TCATTATGGCAGAGTGGGATGAGCCAACAGGAATGAAAATCGCTTCCGAT
GGTAGTTACCCGCCATCCTCCCAGTATGAAATGGTATCATCAGAAATCCA
AGcaagttttaaaaaaagttttggcgtTGGAGATGCTTGCGTGGATAGCG
AAGATTGGCTTGACGAGTTTGAAAAAGACGATTTTTGGGGAAATGGTGAC
GCTCATAAAGAGAAAGaattaaataatgtttttaatttaGAGACTGTTGA
CCTTTTCCGTGTACCTAATTGAATGTCTTCTGGTGAAAGAAAAGACTCAA
TGAAACAAATCGCCCAGAGTGTTTGTAGAATTATTGAAGAAGCGAAGGGA
AATatattcaaaagaaaatgtcttcaaattaTGGAGGTCGATGAATTTCC
TGATTTCGAAAAGAAGGTTTCATCTCGTTTGAACAACCTTTCTAAACGAC
GCTACAGACGTGGTTTGCGTATTGAAAAGattgaagatgaagaaaattcg
caaaagaAAACAGCCACGAAGAAGTCACAAGGATATTCTCCTATAAGAAA
ACGATGTAGAAGAGATCCACTAAAACTGCCCAATACTAATAATATACCTC
CCGAGAATGAAAATGCTCCGAAACTTGAAACAATGTTGATGGATCAGGAT
GTCCAATCCACAGAAAATGACGTAAGTGCTTTTGTGAAAGAAGCTTTGCA
GGAGCAAACAGCACCATATTATCCTGCCGGATCAGAACAGAGGAATTGGT
CTCAAAGAAGTAATGAAAACGTTAATTGGGTAATTAAAGAGGGAGATGGG
CCGATGAATTTATCTCCGTCGTGTGTCGATGTTTCAAAATTATGTGATTT
TATTAACGGGGCTGAAAATCATCAAATTGATATTGATGCTTGGTTAACGA
ATCAGGAAGACTCTCAAGAAAAAAGTCTGAGAAGTGAAAAAGTAAATCAA
GACGAGTTGGTTAtggatgattttttgaaattagatCAACCTGAAGTAAG
TCAGAGAGTTTCTGGCATAGATATAAGCACTTTTTCAGATCGCAACAAGA
TGTCTACAATTCAATCTGTTGTAAAGAATAAGGGTATGTTAGATGATTTT
GAAATTGTGTTTCCTGGTTCTCAAGAGTCGATTCTGAATCAACAAGAAAA
TGGTTCAGACTATAGGGAAAAGCAAATGACCCAAAAAGAACAGATTTGTT
TTAAATTGAATCAACGTATCAAAGCCAGGATTCAAAATGGGCCAGCCAGT
TATCCAAATCAGAGTGTCGGAGTCGTTAAACAAACGAACAGTATCAAAGA
AAACCTGAAGAATAAGATTCTCTCAAGCCAAAAATATCTCTATaacaaag
ttcaaaaaagtgAAGCAGGGAAAGCCGGttttaattttgagaaaagttcC
AGTTTTCTTACATCAGAAGATTTCATTATGGCAGAGTGGGATGAGCCAAC
AGGAATGAAAATCGCTTCCGATGGTAGTTACCCGCCATCCTCCCAGTATG
AAATGGTATCATCAGAAATCCAAGcaagttttaaaaaaagttttggcgtT
GGAGATGCTTGCGTGGATAGCGAAGATTGGCTTGACGAGTTTGAAAAAGA
CGATTTTTGGGGAAATGGTGACGCTCATAAAGAGAAAGaattaaataatg
tttttaatttaGAGACTGTTGACCTTTTCCGTGTACCTAATTGAATGTCT
TCTGGTGAAAGAAAAGACTCAATGAAACAAATCGCCCAGAGTGTTTGTAG
AATTATTGAAGAAGCGAAGGGAAATatattcaaaagaaaatgtcttcaaa
ttaTGGAGGTCGATGAATTTCCTGATTTCGAAAAGAAGGTTTCATCTCGT
TTGAACAACCTTTCTAAACGACGCTACAGACGTGGTTTGCGTATTGAAAA
GattgaagatgaagaaaattcgcaaaagaAAACAGCCACGAAGAAGTCAC
AAGGATATTCTCCTATAAGAAAACGATGTAGAAGAGATCCACTAAAACTG
CCCAATACTAATAATATACCTCCCGAGAATGAAAATGCTCCGAAACTTGA
AACAATGTTGATGGATCAGGATGTCCAATCCACAGAAAATGACGTAAGTG
CTTTTGTGAAAGAAGCTTTGCAGGAGCAAACAGCACCATATTATCCTGCC
GGATCAGAACAGAGGAATTGGTCTCAAAGAAGTAATGAAAACGTTAATTG
GGTAATTAAAGAGGGAGATGGGCCGATGAATTTATCTCCGTCGTGTGTCG
ATGTTTCAAAATTATGTGATTTTATTAACGGGGCTGAAAATCATCAAATT
GATATTGATGCTTGGTTAACGAATCAGGAAGACTCTCAAGAAAAAAGTCT
GAGAAGTGAAAAAGTAAATCAAGACGAGTTGGTTAtggatgattttttga
aattagatCAACCTGAAGTAAGTCAGAGAGTTTCTGGCATAGATATAAGC
ACTTTTTCAGATCGCAACAAGATGTCTACAATTCAATCTGTTGTAAAGAA
TAAGGGTATGTTAGATGATTTTGAAATTGTGTTTCCTGGTTCTCAAGAGT
CGATTCTGAATCAACAAGAAAATGGTTCAGACTATAGGGAAAAGCAAATG
ACCCAAAAAGAACAGATTTGTTTTAAATTGAATCAACGTATCAAAGCCAG
GATTCAAAATGGGCCAGCCAGTTATCCAAATCAGAGTGTCGGAGTCGTTA
AACAAACGAACAGTATCAAAGAAAACCTGAAGAATAAGATTCTCTCAAGC
CAAAAATATCTCTATaacaaagttcaaaaaagtgAAGCAGGGAAAGCCGG
ttttaattttgagaaaagttcCAGTTTTCTTACATCAGAAGATTTCATTA
TGGCAGAGTGGGATGAGCCAACAGGAATGAAAATCGCTTCCGATGGTAGT
TACCCGCCATCCTCCCAGTATGAAATGGTATCATCAGAAATCCAAGcaag
ttttaaaaaaagttttggcgtTGGAGATGCTTGCGTGGATAGCGAAGATT
GGCTTGACGAGTTTGAAAAAGACGATTTTTGGGGAAATGGTGACGCTCAT
AAAGAGAAAGaattaaataatgtttttaatttaGAGACTGTTGACCTTTT
CCGTGTACCTAATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000132_pilon | genome | sc0000132_pilon:767519..771400 + |
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