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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000130_pilon:530371..535048+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.15060.2.p1 ID=MSTRG.15060.2.p1|Name=MSTRG.15060.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4678bp|location=Sequence derived from alignment at sc0000130_pilon:530371..535048+ (Clytia hemisphaerica_ch_hm2_pilon)
CACTGAATGACGCATGGTCTTCTATTGCAGCTACAAAGAAAGAGGTTGGT
ATTTTTAACATCCATCAATTCTTCATTCTGGAGTTTTAATATTTAGAAGA
TAGACATTCTAATTTAAGAtttgaaaatgactttttgaTTGATAGttaaa
aggttttttaattcacttttcgaaaagtgaaaagttaaaaaaaaaaacac
aataaaaaataatctacaaattaatctataatttctaaattcaaaagcTC
CAAGGCCCCTACAACTTTATTTTTTAGActtaagaagaaaaattaccctA
CTGTAATTTTTTCCTGGGTAATAATGGTATATAATCAATATTATAACACA
TGGCAATGCACTTCTTATCATATTATATCATTCCTTTTAAAATTATAGAT
TAATCAAGTAAACCATAGAATAAGGCAAGTATCAAGCCCTATTGATTTTT
ACCATGATGATGAGGCAGATGAACGCTTACCGCCACCTCCACCCAAGAAT
AAGAACAATCCAAACATTGAACGAAGGACTATTTATCAAATGCTTGAACA
GGTGACAACTCAAATTCTGCTATTGAAACAATATTCTCCTTTCCAAGCGC
CTTTTAATGTTTATAATGTAAGAATTTCACTAGAAATTGACTACTGATAC
TCGGCAAACAGtcactctaaaggccatggctctgtaagagaatctgcccT
GATTGGCTCActgatttgatatttttcatcaaagtttggAATGAATTTTA
AATGAGCTTTAATTAATCACAATGATTGGCTAAAATGCAACACTCGCACC
AAAATCTAGTACCAATTAAAGCAAACTTTAGAACCAAGTtgctttcattt
ttgttttgactgaacAAGCAGGTCAGATTATCCCTTTAGAACGGATTGTG
ATATGCACAGAATGGATAGTCTGTTATAAGATTAGACATGTTTCTATCTT
CTCTAGACCAAAACACGCAAAGAAAACATTCCTCCTCCAAGCTATCCACA
ACCAAACCTCCATAGAATTCCACCAAGCGTGGGTGAGTTGCACTTTAGAG
ATATTGTTGTGAAAAAGGCTGGTTGCTCTCAAGATACTTCCTAGCTTTCG
AAATCTCACTTCTAGCAATCTTGTTGTTTTCTCTTATACTCTTGTTTCCA
TTGCACTCTTTTCACTTGTTTTTTACCCTCTGTTTAGATGAAATAAACAC
ATACAATATACATGATGAACATCCACAACGCAATACATCACTGCGATCAT
TGTCCAAACGAGAAAGAAAAAGTGGTAAAAGTAGAactagtttttttata
aagtattAAAATGCTTACAAGCTTGTATAACATTGTTAATGTAATGCCTC
AATTTGCTTTTTGTCTATGATCACtttttttACAATATCTAGAGGCTCTC
AAACGACTGAAAGAGAAGATTCAACagcaaaaaattaattcaagcaCGTC
AACTGTTGAAGAGGGTATGTTTTAACAAGgaacaaattaaaagttttaaa
ttcaTTTAAGTCTTCATAACAAAAGTGCGAGTCTTTCTGAAAGAAATCCT
GCAATAAAGTAGCCTTGTGAATTCAGATTGAACTAGGAAGGCAAAAACGT
ATTTATGGGAATGAGATTTTTGTCCATCTTAGATTGACATTGTCCAACAT
GAATTACATTCAGATGTATTCAAAGTGACTTTGAGTGTAACAGTGTGTAG
CATCAATATTGCATTCTATTTCGTAACTTGATATAATTTTTTGGTACCTT
TTAGCTTTTCCATATAAAACTCATCACAATGAGATTGACATTGTCCAACA
TGAATTACATTCAGATGTATTCAAAGTGACTTTGAGTGTAGCAGTGTGTA
GCATCAATATTGCATTCTATTTCGTAACTTGATATAATTTTTTGGTACCT
TTTAGCTTTTCCATATAAAACTCATCACAATGAGAATGATATTGTGCAGC
ATGAAGATGAACGAATTCCACAACAAGCAGCCATGACACGGAAAGTTGCT
CATGCACCTACTGCTCCCACTTATACTGGtatgcttttttaaaaaaattc
tgtttctGGCTCAAATTATGGGGAATATAGATTTAAAAGAGGCTAAGTTA
AACTGCTTCTTTCTGATTAATACTTTTAAGATCTCTCTAAGCTTAAGGCT
CCACAACAAAGTATCATGGCTTTATATTGTAGAATTTTATTTGACAAtga
tcgtgttcaaaaataaaggcctgttttgtgacattttcaaagtgGCTGAT
Aattatgttaataaaatgagtatttttggtggctaacagtttattttttc
accaaggatAAGTAGAATGATTAACCTTTCCAATTGTTTTGGAGCGAAAT
TAAGTGGCTTACTGggttacaagatatttcaagataagctATGAGTCGTT
TATGTGGCTGACAACACTGGTGGCCTACAAAACCAACCAGTCTCAGAATG
TTGCtcttttatctgttttgagataatatgatacctctagttacggattc
aagtgtcattttcaaacaaaccatttcctcctttgaggtggctgacaaaa
cacttatttggacatatttggacctggagccacacattttactcatttta
gcatttttttcatcaaaataagtttttttgtgtaaataccgatcataata
taaaatttcaacgttaggcgaaacaaaaaaaatttcttgattccggaaac
cggccgggtgaaaaaaattttttttctgacccggccgcaaactttcgttc
gttagtagtccgtacttgttgtaatttagggcataatttatgctgtgttt
atacataaaagttattcttaaactctatttcaatgagccataaattatca
aaaatagcaaaaaaaaattattttccggccacccgcattccggaaacaaa
acattttttatcattcgccttatatttgaaatatttcccaaggtattcaa
gaaatactatatttttttaaatttttgagttcactaaatgtcacactatt
tttgaacatgatCCAATTCATTTCTTTTTAGGCTTTAATTTACAACCAGA
TGCAACTTTTGTCAAATCGACAGTCAAAGTTTCCCCACAAATGAAGAGGA
AATCGAAAGCaaaaaaaGCTTCACTTGACCaagcaaaaactaataaacgt
ATTGCCCATGacagaaaaaaagcaaaaggtAATAATAATATGGTGTATCT
GTAACATGCTTTTATATTTTAATAACAGAATTTTACTCCTAACTTTTCCC
AATCAAAGGGCAGtagaaataaatctttttttgaaagtattatAAGAAAT
TTGCTCTCGAAAATTGCAAGCCCATTAATTCAGCATTaaaaaaaCCTTTC
CTGTCACCTTTTGCTAGACATTATAAACAGTTTTCTTAATATATTCGAGC
GGGATTCTTATTTGTGATTGTAATTGCTTATAATCCAAATTGAActttag
aaatttgtttttgtttagtttCAAAGAACCAACGAGTAGTTGCAACAAAG
AAATCTACCACAAACAATATCATTACAACTTCTTCATGGAGGGTGGGGCA
ACAAATCCAAcggaaatataaaaaagaaatgacCATGcacaaagaagaga
aaagtgAATGCAAAAGTGATTTGGCTACCACCACCAAAACTAACCAAACA
TCAGACCTCAAAAGTGATAAAGGTATCAAGTAATTGATAAAAAGAGGTTT
TCGAGATCCAAACTTTCAGACATAGTGGCTCGAGTGCTAAAATCATGACA
AGTGGGTTTCTTAACCCATCACTTTCATAACTTAAAAtgtttaattcttt
tttatttcaaatgtgCATGCATGCACACCCAAACTAGAAATTGTTTTATT
TACTGGAGCAAGGTAAAAAACAAGGCACCACAGTTCCTGGCACTCCTTCC
TCCAGATATAGTCACTATTTTAGGCTAAAAATGAAGAACCACTTGGGGCT
ACAGTAGCACTAATAGCAATCTTATctcgttttcttttgttttagagaaC
AATAATTCAACTGATAGTCATTCCaaaaaaaCAAGCTCAAACCTTCACTC
AGAACTTGATAAAGATTTAATATCGGAAAAAGCAGATGAGAAAATATTCC
CTGACCATTCAAAATCACCAGTTAGCGAAGAACAGAAAAGTGATACAGAC
TCACTAAGAGGTTTGGAACAACTTCAAGATGATGTGCTGACAAAAACAGC
CAAAGATGTGATGGCAGAACTGCAACACAAAGATGAAACTTCACCAGTTT
GTAAGAGACTaatctttcaattttcatgTATCATTGTGCCTATCAATtgt
ctcttttgaaaatatactGGAAGATCTCACGTATTTACTTATAAAGTAGA
CATTCCATTCCATATTCACATATTATCGTAACTAAAAGCATGTATCTTGA
TATGATGAAGTGATGTCTATATTTTTAGTTCATTAATGGCATTTTACTTT
GTAATTGAGAATGTTTCTTAAGTATTGTTTCTTAGTGACACACAACACTT
GTAACTAAGAACGTCTTTTAAGTTCATATTCTGTAAAGAGGTTTTAAACA
CAAATTTGCACCATTAGTAATGCCTTATTTTTATACAGCAAAGAGGAAGA
AATTGGCAAAAGCAGTAGTTGATACTGGTCAAAAATCACAAGCAACAAAG
AAATCACCTTCAGTCAAACGGAAGCTTG Coding sequence (CDS) from alignment at sc0000130_pilon:530371..535048+ >MSTRG.15060.2.p1 ID=MSTRG.15060.2.p1|Name=MSTRG.15060.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6657bp|location=Sequence derived from alignment at sc0000130_pilon:530371..535048+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAACATCCACAACGCAATACATCACTGCGATCATTGTCCAAACGA
GAAAGAAAAAGTGGCTCTCAAACGACTGAAAGAGAAGATTCAACagcaaa
aaattaattcaagcaCGTCAACTGTTGAAGAGGCTTTTCCATATAAAACT
CATCACAATGAGAATGATATTGTGCAGCATGAAGATGAACGAATTCCACA
ACAAGCAGCCATGACACGGAAAGTTGCTCATGCACCTACTGCTCCCACTT
ATACTGGCTTTAATTTACAACCAGATGCAACTTTTGTCAAATCGACAGTC
AAAGTTTCCCCACAAATGAAGAGGAAATCGAAAGCaaaaaaaGCTTCACT
TGACCaagcaaaaactaataaacgtATTGCCCATGacagaaaaaaagcaa
aagtttCAAAGAACCAACGAGTAGTTGCAACAAAGAAATCTACCACAAAC
AATATCATTACAACTTCTTCATGGAGGGTGGGGCAACAAATCCAAcggaa
atataaaaaagaaatgacCATGcacaaagaagagaaaagtgAATGCAAAA
GTGATTTGGCTACCACCACCAAAACTAACCAAACATCAGACCTCAAAAGT
GATAAAGagaaCAATAATTCAACTGATAGTCATTCCaaaaaaaCAAGCTC
AAACCTTCACTCAGAACTTGATAAAGATTTAATATCGGAAAAAGCAGATG
AGAAAATATTCCCTGACCATTCAAAATCACCAGTTAGCGAAGAACAGAAA
AGTGATACAGACTCACTAAGAGGTTTGGAACAACTTCAAGATGATGTGCT
GACAAAAACAGCCAAAGATGTGATGGCAGAACTGCAACACAAAGATGAAA
CTTCACCAGTTTCAAAGAGGAAGAAATTGGCAAAAGCAGTAGTTGATACT
GGTCAAAAATCACAAGCAACAAAGAAATCACCTTCAGTCAAACGGAAGCT
TATGATGAACATCCACAACGCAATACATCACTGCGATCATTGTCCAAACG
AGAAAGAAAAAGTGGCTCTCAAACGACTGAAAGAGAAGATTCAACagcaa
aaaattaattcaagcaCGTCAACTGTTGAAGAGGCTTTTCCATATAAAAC
TCATCACAATGAGAATGATATTGTGCAGCATGAAGATGAACGAATTCCAC
AACAAGCAGCCATGACACGGAAAGTTGCTCATGCACCTACTGCTCCCACT
TATACTGGCTTTAATTTACAACCAGATGCAACTTTTGTCAAATCGACAGT
CAAAGTTTCCCCACAAATGAAGAGGAAATCGAAAGCaaaaaaaGCTTCAC
TTGACCaagcaaaaactaataaacgtATTGCCCATGacagaaaaaaagca
aaagtttCAAAGAACCAACGAGTAGTTGCAACAAAGAAATCTACCACAAA
CAATATCATTACAACTTCTTCATGGAGGGTGGGGCAACAAATCCAAcgga
aatataaaaaagaaatgacCATGcacaaagaagagaaaagtgAATGCAAA
AGTGATTTGGCTACCACCACCAAAACTAACCAAACATCAGACCTCAAAAG
TGATAAAGagaaCAATAATTCAACTGATAGTCATTCCaaaaaaaCAAGCT
CAAACCTTCACTCAGAACTTGATAAAGATTTAATATCGGAAAAAGCAGAT
GAGAAAATATTCCCTGACCATTCAAAATCACCAGTTAGCGAAGAACAGAA
AAGTGATACAGACTCACTAAGAGGTTTGGAACAACTTCAAGATGATGTGC
TGACAAAAACAGCCAAAGATGTGATGGCAGAACTGCAACACAAAGATGAA
ACTTCACCAGTTTCAAAGAGGAAGAAATTGGCAAAAGCAGTAGTTGATAC
TGGTCAAAAATCACAAGCAACAAAGAAATCACCTTCAGTCAAACGGAAGC
TTATGATGAACATCCACAACGCAATACATCACTGCGATCATTGTCCAAAC
GAGAAAGAAAAAGTGGCTCTCAAACGACTGAAAGAGAAGATTCAACagca
aaaaattaattcaagcaCGTCAACTGTTGAAGAGGCTTTTCCATATAAAA
CTCATCACAATGAGAATGATATTGTGCAGCATGAAGATGAACGAATTCCA
CAACAAGCAGCCATGACACGGAAAGTTGCTCATGCACCTACTGCTCCCAC
TTATACTGGCTTTAATTTACAACCAGATGCAACTTTTGTCAAATCGACAG
TCAAAGTTTCCCCACAAATGAAGAGGAAATCGAAAGCaaaaaaaGCTTCA
CTTGACCaagcaaaaactaataaacgtATTGCCCATGacagaaaaaaagc
aaaagtttCAAAGAACCAACGAGTAGTTGCAACAAAGAAATCTACCACAA
ACAATATCATTACAACTTCTTCATGGAGGGTGGGGCAACAAATCCAAcgg
aaatataaaaaagaaatgacCATGcacaaagaagagaaaagtgAATGCAA
AAGTGATTTGGCTACCACCACCAAAACTAACCAAACATCAGACCTCAAAA
GTGATAAAGagaaCAATAATTCAACTGATAGTCATTCCaaaaaaaCAAGC
TCAAACCTTCACTCAGAACTTGATAAAGATTTAATATCGGAAAAAGCAGA
TGAGAAAATATTCCCTGACCATTCAAAATCACCAGTTAGCGAAGAACAGA
AAAGTGATACAGACTCACTAAGAGGTTTGGAACAACTTCAAGATGATGTG
CTGACAAAAACAGCCAAAGATGTGATGGCAGAACTGCAACACAAAGATGA
AACTTCACCAGTTTCAAAGAGGAAGAAATTGGCAAAAGCAGTAGTTGATA
CTGGTCAAAAATCACAAGCAACAAAGAAATCACCTTCAGTCAAACGGAAG
CTTATGATGAACATCCACAACGCAATACATCACTGCGATCATTGTCCAAA
CGAGAAAGAAAAAGTGGCTCTCAAACGACTGAAAGAGAAGATTCAACagc
aaaaaattaattcaagcaCGTCAACTGTTGAAGAGGCTTTTCCATATAAA
ACTCATCACAATGAGAATGATATTGTGCAGCATGAAGATGAACGAATTCC
ACAACAAGCAGCCATGACACGGAAAGTTGCTCATGCACCTACTGCTCCCA
CTTATACTGGCTTTAATTTACAACCAGATGCAACTTTTGTCAAATCGACA
GTCAAAGTTTCCCCACAAATGAAGAGGAAATCGAAAGCaaaaaaaGCTTC
ACTTGACCaagcaaaaactaataaacgtATTGCCCATGacagaaaaaaag
caaaagtttCAAAGAACCAACGAGTAGTTGCAACAAAGAAATCTACCACA
AACAATATCATTACAACTTCTTCATGGAGGGTGGGGCAACAAATCCAAcg
gaaatataaaaaagaaatgacCATGcacaaagaagagaaaagtgAATGCA
AAAGTGATTTGGCTACCACCACCAAAACTAACCAAACATCAGACCTCAAA
AGTGATAAAGagaaCAATAATTCAACTGATAGTCATTCCaaaaaaaCAAG
CTCAAACCTTCACTCAGAACTTGATAAAGATTTAATATCGGAAAAAGCAG
ATGAGAAAATATTCCCTGACCATTCAAAATCACCAGTTAGCGAAGAACAG
AAAAGTGATACAGACTCACTAAGAGGTTTGGAACAACTTCAAGATGATGT
GCTGACAAAAACAGCCAAAGATGTGATGGCAGAACTGCAACACAAAGATG
AAACTTCACCAGTTTCAAAGAGGAAGAAATTGGCAAAAGCAGTAGTTGAT
ACTGGTCAAAAATCACAAGCAACAAAGAAATCACCTTCAGTCAAACGGAA
GCTTATGATGAACATCCACAACGCAATACATCACTGCGATCATTGTCCAA
ACGAGAAAGAAAAAGTGGCTCTCAAACGACTGAAAGAGAAGATTCAACag
caaaaaattaattcaagcaCGTCAACTGTTGAAGAGGCTTTTCCATATAA
AACTCATCACAATGAGAATGATATTGTGCAGCATGAAGATGAACGAATTC
CACAACAAGCAGCCATGACACGGAAAGTTGCTCATGCACCTACTGCTCCC
ACTTATACTGGCTTTAATTTACAACCAGATGCAACTTTTGTCAAATCGAC
AGTCAAAGTTTCCCCACAAATGAAGAGGAAATCGAAAGCaaaaaaaGCTT
CACTTGACCaagcaaaaactaataaacgtATTGCCCATGacagaaaaaaa
gcaaaagtttCAAAGAACCAACGAGTAGTTGCAACAAAGAAATCTACCAC
AAACAATATCATTACAACTTCTTCATGGAGGGTGGGGCAACAAATCCAAc
ggaaatataaaaaagaaatgacCATGcacaaagaagagaaaagtgAATGC
AAAAGTGATTTGGCTACCACCACCAAAACTAACCAAACATCAGACCTCAA
AAGTGATAAAGagaaCAATAATTCAACTGATAGTCATTCCaaaaaaaCAA
GCTCAAACCTTCACTCAGAACTTGATAAAGATTTAATATCGGAAAAAGCA
GATGAGAAAATATTCCCTGACCATTCAAAATCACCAGTTAGCGAAGAACA
GAAAAGTGATACAGACTCACTAAGAGGTTTGGAACAACTTCAAGATGATG
TGCTGACAAAAACAGCCAAAGATGTGATGGCAGAACTGCAACACAAAGAT
GAAACTTCACCAGTTTCAAAGAGGAAGAAATTGGCAAAAGCAGTAGTTGA
TACTGGTCAAAAATCACAAGCAACAAAGAAATCACCTTCAGTCAAACGGA
AGCTTATGATGAACATCCACAACGCAATACATCACTGCGATCATTGTCCA
AACGAGAAAGAAAAAGTGGCTCTCAAACGACTGAAAGAGAAGATTCAACa
gcaaaaaattaattcaagcaCGTCAACTGTTGAAGAGGCTTTTCCATATA
AAACTCATCACAATGAGAATGATATTGTGCAGCATGAAGATGAACGAATT
CCACAACAAGCAGCCATGACACGGAAAGTTGCTCATGCACCTACTGCTCC
CACTTATACTGGCTTTAATTTACAACCAGATGCAACTTTTGTCAAATCGA
CAGTCAAAGTTTCCCCACAAATGAAGAGGAAATCGAAAGCaaaaaaaGCT
TCACTTGACCaagcaaaaactaataaacgtATTGCCCATGacagaaaaaa
agcaaaagtttCAAAGAACCAACGAGTAGTTGCAACAAAGAAATCTACCA
CAAACAATATCATTACAACTTCTTCATGGAGGGTGGGGCAACAAATCCAA
cggaaatataaaaaagaaatgacCATGcacaaagaagagaaaagtgAATG
CAAAAGTGATTTGGCTACCACCACCAAAACTAACCAAACATCAGACCTCA
AAAGTGATAAAGagaaCAATAATTCAACTGATAGTCATTCCaaaaaaaCA
AGCTCAAACCTTCACTCAGAACTTGATAAAGATTTAATATCGGAAAAAGC
AGATGAGAAAATATTCCCTGACCATTCAAAATCACCAGTTAGCGAAGAAC
AGAAAAGTGATACAGACTCACTAAGAGGTTTGGAACAACTTCAAGATGAT
GTGCTGACAAAAACAGCCAAAGATGTGATGGCAGAACTGCAACACAAAGA
TGAAACTTCACCAGTTTCAAAGAGGAAGAAATTGGCAAAAGCAGTAGTTG
ATACTGGTCAAAAATCACAAGCAACAAAGAAATCACCTTCAGTCAAACGG
AAGCTTATGATGAACATCCACAACGCAATACATCACTGCGATCATTGTCC
AAACGAGAAAGAAAAAGTGGCTCTCAAACGACTGAAAGAGAAGATTCAAC
agcaaaaaattaattcaagcaCGTCAACTGTTGAAGAGGCTTTTCCATAT
AAAACTCATCACAATGAGAATGATATTGTGCAGCATGAAGATGAACGAAT
TCCACAACAAGCAGCCATGACACGGAAAGTTGCTCATGCACCTACTGCTC
CCACTTATACTGGCTTTAATTTACAACCAGATGCAACTTTTGTCAAATCG
ACAGTCAAAGTTTCCCCACAAATGAAGAGGAAATCGAAAGCaaaaaaaGC
TTCACTTGACCaagcaaaaactaataaacgtATTGCCCATGacagaaaaa
aagcaaaagtttCAAAGAACCAACGAGTAGTTGCAACAAAGAAATCTACC
ACAAACAATATCATTACAACTTCTTCATGGAGGGTGGGGCAACAAATCCA
AcggaaatataaaaaagaaatgacCATGcacaaagaagagaaaagtgAAT
GCAAAAGTGATTTGGCTACCACCACCAAAACTAACCAAACATCAGACCTC
AAAAGTGATAAAGagaaCAATAATTCAACTGATAGTCATTCCaaaaaaaC
AAGCTCAAACCTTCACTCAGAACTTGATAAAGATTTAATATCGGAAAAAG
CAGATGAGAAAATATTCCCTGACCATTCAAAATCACCAGTTAGCGAAGAA
CAGAAAAGTGATACAGACTCACTAAGAGGTTTGGAACAACTTCAAGATGA
TGTGCTGACAAAAACAGCCAAAGATGTGATGGCAGAACTGCAACACAAAG
ATGAAACTTCACCAGTTTCAAAGAGGAAGAAATTGGCAAAAGCAGTAGTT
GATACTGGTCAAAAATCACAAGCAACAAAGAAATCACCTTCAGTCAAACG
GAAGCTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000130_pilon | genome | sc0000130_pilon:530371..535048 + |
|
