MSTRG.14943.3.p2 (mRNA) -

Overview
NameMSTRG.14943.3.p2
Unique NameMSTRG.14943.3.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000128_pilon:450432..460367+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14943.3.p2 ID=MSTRG.14943.3.p2|Name=MSTRG.14943.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9936bp|location=Sequence derived from alignment at sc0000128_pilon:450432..460367+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGATCTATTTAGCTTATTTAAAGAAATATTCATTTTCCTAGAGGTTGAA GAAGAACCTTTAGATTCTTACGGGCGAACCGTATATCGTGAAGAATGCTT ACGTCAGCAAATTATACCTATTACGTCATTTATCAAGCAATTACCtgaag aaaaaatgacattgaaATTTCGAGGATTTAATGAAAAAGCTTCAAATGCA CTCTCATCAGCTCTTTCGGTAAGAAAAAATCCTCACTTATATCTCTTATC AAAACTGTAAAAGAACATAACGTTTTGaaggcaaaaatgttaagaacgag tttaaagaacattttaaggctttatggactgtaaaacacataatttttta tattaggaaaattgcaaaagaaaaaactcaatcaaaaacatttaaacatt taagaaaatctgaagaattcaaatGTTTAGGTCTTTCGACTGACTAAAAT GGGCAAATTAGTTTGAGTCGCGTTCGAAATCGTATGGATTGTATGTTTAA TTATCAATTTATGACACCTATCTACTTATATAGGCGAACAGTCGAATCGA GATATGCGATTTATCCAACAACAATATGGGATACACAGCTGGCCTAAGTT TGGTTGAAATGttgaaagaaaatacttttATCACACATCTTGTACGCTAT CGTCACCGTCGTGCGACTTTATTATCCACCGTTTTTGACGACATTTGACT TTATCGTACATTTTCAGTAGTTTAGATAATTCGCTCCATGATTCGAACGT ACTTTCTTGCCCCTTTCGCTCACAAACCTTTATAAACGAATCGTTGTGTT GTGAGTTTTAGGGTAGGCATTATATATACAATTGCCGATTTTGAAGGTGA ATAGGATTTTCATCAAGTAGTAgagtgtcgtttatgagagtttcttgttg acgatgacattcaatattatcgaataatggagcttATCGAATGAATGTCG AATTACatataaaatgtgttttcagCTGGCTGCCCTTAAGGGGAATGGGG ATAGCTTTTTGATCATTTGTCAAACTGTGTGATGTGGCTtcggaattttt catttttcattttcttttttcaggatttaTCAGAAAATCAACTTGGTAAT GCAGTTGGAATCAAACTTGGAGAAATGTTGCTCACAAACATATACATGAA AACACTcattttgaaaggtattttagGTGATtttttggaatgaaaaaaaa agagaatttaaCGTTAACTAGAGAAAACAGGCATACTATGGATACCCTTA TGTTTTCTGTCTGCAAGACCATTATAGTGACTCATACCAACACGAAATAT AAGTAGACTTTACTAATGGAAAAAATGGTTTTAATAAagtcttttccaaa aaaatgacagaccGCTTCAAGTAAGCATATATTTACAgggggggTCGAGC AGTTAGTACATGACACCCATGATACTTAGTACGGTGGTGGTCCATtctca aaattggaaaaaattcagTGTAAAAATAGGTGGTTATGCTTAGTGATTAA CAGCAAACTTAGTGTACAACATACAATACAGTATTCCTCCAAGAGTGATG TATTAAAATGTGCGACCTGTGGAACAGACTACCGTTTTTCCATTAGACTA CTTATATTCATGTTGGTAAAAGTCACTTTAATTagtcacttttttagaaa tcttagTGTTAATTTAAAGCCGATCTGTGAAGTTGTTGTCAGGGGTGTTG TAGTTCTTTTAACTACCTTTACCCATTGAGGATTTTAATTAGTTTACTTA AGTTTCTGTACCCAGCCTACTGAACTTGTGGAATTTCtgattaaaattta aatatgtAAGATGGAAAAGACATGgagatcccgggggggggggggtacta cccttgacGACTGACGGGGGTgttccgctgaggttcgaaaaatggaccct acgtgggactcgaaatttgcgaaaaaagtgaccctgaatgggactgaaat tccaaaattttctcaaattttctactttttccccaaattttccaaaaata ggcaccctacgagggactgatttttctattttgctgtttttgtgacccta cctgggactcgtggaggttaaaaaaggtaccctgaccagcggagcatccc cgtaacccatcttgccctagtacccccccccccagatgGAGATAGtaaga gatttaatttaattttaagaaaggattaagaggattttagaagaatatta attttaatttattagtGGTTGAGAAGAAGCATGGATTTTATGGGAGATTT atttaataaaagaaaagaaaggtaTGTATATTATACATATATATGGTTTG TAATATTAACTTAATTGGTTAAAATGTTTACTATAAcgtaagggagtggt cagaaagtatctactaggggggggggggtggaggattctttcttctaggg gggggggttccaaaattttttcgagggtttagggggggggtttcaaattt tttttgagggtttagggggggggttccaaatcttttgggcaactcaagag aaaatgtaggaagtctaatttcatagttttacgtttcaagatttcagaat ttattttatttcatatatgtacatgtcatactaacattatttgggcatca tcgccttgcccttttggtttgtagcattgagctaaatgagggaagtagat tagtggcttTCACAGCTtatcagagtggtttgaaaaagtactttttagaa agaaatttgtcaaaacaaagtgtcttttagctaaaatggtggtcAAAAAC ATCGACATTTTCTCCCGtctgcgcaaaccatggttgtgcctccttagtct ctactaatatcttataaattatatacacagagctttgacagacccttgaa aacctgaaaatataggtttatagggaaatttcaaactcagagaattttat ttttcagactccttttaacaacagaatagcttgtattttaggttctcgag tacctgatcttcaaaattttctcccttcggGGCCAACCATGATGGCCCCT CAGGatattttgagtaattgagTAATGCTCTGTAATTAGGGAGATTATGT ATCCGGGAAATAAGCCGTCATTTTCTCCAAACTTTGGGAACTCAGAGAAA ATAACTCgttgattcttattttaaccctgGACTATTCCtaggagatctac cattttgatgacgtttacacccacgggtttttttctttttttacttcaga gaaattccgtcgtaaccatggaaatcgacggaaaaaatcccgtggtgtaa acgtcaatcaaaatggtagatctcctaaaggactatactcactttacagg gctaaactatctcccttacctaattttgacataaaaaaCtgtcatacaaa caaataatactttgtaccgcatctgtatgaattctttttttgcgtaaaat tttctagtggggggggtgcgaaaaatattgggccttatgaggggggttcg aaatttttttccaggctagGGGAGGGGTGCGAAAGTTTTtggggattttt caaatatcCCACTCCCCCCAGTAAcatttctgaccactccctaataAAGT AATCTGAAAATGCATATGAAGGtgcatataaaaataaaGaataaCTttta tgaGttAATCAAGATTATGTAGAAAggaataaatattttgtataagataa aacaataaattttttgtatatgattataaatacaagaaaaggaaaaataa aaggagaataaaagagagtgtatgagataagaagaaaaagatatatatga agTTAATCTTTCAAATAATGTTGGCTTTTCAGGGTTTTGTCTAGTCATAA AGTTATTTATATTTAGAGGATGGTGGAGAACTCCACCACTTTTGGTTAGC CAGTGTTAATTTAAAGCCATCACATGTTGTACAATGTATGTTACATTCTT ACAGGTAATAAATTCACCAACCCGGTAGCCAGAATATTTGCTgaggtttt caaaacaaatgatacACTGGTCGAACTTGATTTGAGTTATAATGAATTTC ATGAGAATGGTTCACTTTACTTGGGTGCTGGACTGGTAAgttatttttct cttattttacAGACTAGATACTAcccatgatatgcaccattgcaatgtct tccacggacccaacagctgattggttgaaagtgacgtattgtaTTGACTA ATTttaccaatcagctgttgggtccggtaatgtcagaagacattgcgaTG ATACATATCATGGATAATTTCTAGTTTGTAAAATAAGAGAAAGTTTTTCA TGTTTGTTAAGTTGCGTgttttccgccattatggaagcaaacgttcgatt tgcGTATGGGATCGCCTCTACatattcgaacgtttgcttccatgaTGGCT GAtaaagttacgtaacttaacaataCATGTAAAAGCTCTAGATATTATGT TGCTGTTTTTGACCCCATTTTCCGGCCCAAAGCTGAGGGGTCCGTTTAAT ATTTTGTAGCCATTTTAATTTCTGTATTGGGAAGATTtcggagaagaaaa aaaaacagcttaACATTAAAGttatagtttgatcaattatttTCCTGAAC TAACATGATATGAGATAAATTTATTTATACTAGCAGGCACGACTCACAGA GTACGATTGTTAAAGTATTTCCTTTTATTCTCCATATATCAGATTGAGTA ATCCCCTTTCTCTATTCAGGCACTAAACGAAAGTATAGAAGTTTTGAGCT TGAAGTGGAATTCCATTCGTGGTAAAGGGGGTGTCGCAATTGCGGCCGCC CTCAGTGTAAGTGAATTTGATTCAAATGATAATTTATTGTCTTAAATAGC AGACCTCTACActctctacaaaaccgcagatAATCCAATCTTTAGAAGGG CCACGAATTCGTTAGAGGATACCATAAGGGATTCTAAGTATTGTGATCCA AGCTATAGGGATTTATTTTTCCAGGATTCTATAAAAATGGACCCTGATTG GGGTGACATTCAGTGAACATTTTATTTGTATTTGATTCTTCTCTTGTTTT ATCCTAAGGAATATATCCGATGTTTCTTTCTAGAAAAATTCAACATTGAG GAAACTCGATTTATCCTGGAACGGCTTGGCTTTCATTGGTTGTTTGGCGA TAGGGCgccatttgaagaaaaattcaacaCTTGAACACTTGGATATCAGG TAACAAATGATTTGCGTTCCCCACTAGTCTACACGATAGACAGCTCCAAG CTTTtactcaggtaagttatggcatatctcaaaaacctgaaaattaccat aatttttgaaggccattagccggcagaaaatgaggaaaccaatgatttgc aacgaaggataccatgatgaagtttcgctGTAGGGGTGTTACCTATTGTT ACGCCCTTATTTCGCGAAGACCGCAAAAACCAAGTGCTGCGTCAgcaaac ttgttttttaatatCTCCAGTTGGTAAGGTAGAAACATGAATTGGACCCA TGTTGAATATCATTTGGGgtcatttgcaaaaaaaaaattttcgaattttc tatCGTCAGCAGAAACAGCAAATacgaattttgcaaaaaagtgctgatgt cagcaaaattcaaaatttttttttgcaatccttTAAATGATTCTAATTCA GTCCAAATTCATGTTTCTATCTTTGGCCCAAGGAGTtctcaaaaaacaag ttttgctgacgtcagctttttttagttttgcGGGTTTTCGCGAAATAAGG GCGTAAAAATTAGGTACACCCCTACAGCGAACTCATCATGGATCCTTCGT TGCAAACATTGGTAACTTTGATAGagttcgaatcaagttgcgattaagtg cttttaaaatgatattcgtgagtggaatattatcaagtaaaaaaattgag aaaaaaaggaaaatgaaaatgaaaaataaagagaaaaaatcaactttttg taaaatgtggtataattaccatttcacaggagtgattttCAATCTTAGGA TCATCagtgtcaaaaatttcaaaatataaatattcattcaatcaaaagat tcaaagaaagtttattgctggttgctctaaaatagtaaaaactggaaaaa acacaaaaacagccttttgtcgatcaccgcataaactttttttgatctct ttattgaataaatatttttaaaaattttttcacattgatgatgatctaag aaaGAGCATCCGTGAAAATGGtaataccacatttctacaaaaagttgatt tttttcttcttcatttttcattttcattttccttttttttctcaattttt ttacttgataatgttccactcacgaatatctttttaacgagcacaaaatc gcaacttaattcgaattctatcaaaagttacagccatttttttctccagc tgcaaattatttcgagacagactttaattttcaggtttttgagacatgcc ataacttacctgagtaGGCTTTACTCTTAACATAGTAAgggttttacgct cgaaacgaaggaagatatggcATGCCTTGTTCTCCACGTGTTGTTTTCAC ACTTTTGTAATTAATGTTGGTGCATTTTCTTATGTTGGAAATCATGACTT ACggctaaatcttcatgatgcacAGAGACTTAAAGAATTTTTTGAGACTT TTCAATACTTTACCGTGGTTCGAACCTACATGTCTCCGATTATGAAACAT GTAGTCTATTGCACTGGGCTACGACGGTTGCTGATTTTCCGAAATTCAAG GTTATTTTATAGAGTGACATATATAGTATATACGGGTGAACAGACCtcac gagttaggctaactgttatgatcgcCATTCCTCCAGGAAGACCCCACACA CGGGTGCACCACCGGGGGGTGCACAGTCGTCTGGGTGCATGTTAGGCATG AGCCACAGGCTGGCTACGCTACGATATTTTGCTCGCTACTTGCAAGGCTG GTGAATCATCAAGATCTAGCCATAAGCATGACCAGATCTATTTTTCAATT CATGCTTAAAGGGATAAGCAGGAGACTAAGATGGAGTTTACCAGAAGGTT ACGTGTTGAAATTCTCAAGCTTTTGTATGGGAAAATCAATGTAACGACTA AATACTTTGGATGTCAATTCTAAGAGTTGATACGATAGTTTGAGGTAATT TGTAGTAGCAAAACCTTCAATTATTCAAAAcgaaaattctcaatttcagT AACAATCGAATAGGCTGTGATGGAGCAACAAAGCTTGTAGGCGCTCTTTC AGTACATCCCGTTTTGGAGACGTTTAAAATCGGATTAAACCCGATCGGGG ATGAAGgtgttcaaaaaatcttgaaagcAATGGAAAAGAACAGTTCTATT TATTTATTGTCATTTGAGGTGAGTTGAACAGTTACCAAATTGAGACTCAA CCTTTGATGTTTCAGTATGTTAAGAAGCAAAACACGATGGAAGAtttttt tCTACGCATGATTATCAgacgtagaaaaaaataatttctaaaatAGGTCG TtgactttgatgaaaaattctgGAGTACAAATAAAATTTAGGTTGAGCGA CCTTAGTCTCTCTGGCATCAAAGGCTGTAAAATTCTAACAAGTGTGAATT GTTCTTGACGTATTTACATAGTGGTCTTtgattatttcatctatgaattt agaaaatcacaatttgtcaaaaaacactGTGGATGATCGAAAACCTCCAG AAATCTCGAGATATTGAAATTATCACAGGTGGGATGGGAGGATTCTCAAA AGGAAAGGTAAAGGTCATTATTTCATTTATGATAATATGTCACTTGGCTC ACGGGCTGTATACcgtaaattaaactttttacgTGCAAATTACGTTGTGC TTCTTCTATTCTAAAAAACGCACCCACCGCTTACTGCCCTTCTCTCTCCC CTCATTTGCTTTATCGTCAGTCCCTTGATCTTACTGAGTGAGGTGTTTTA GAGGTAATTTTAAGCATTTATCTAAATCATCAgaggaaaacaaatttttt tttgggaatATGCATGTAGTTAATTTCTAAGGATGGGCGGGCGTTGTCCG TATATCCTATAgactacaatcagtgacaaaatatgtAGCAATTTCTTGAA ccccccccTAATATCAGTGCTGATGTGAGCTTTTTCTGAACATGGTAGCA GTCTTTCCACGCATCAACATTTATACTAGGGGGAGGGAATTCTTGCCACA ACATCTAGTCACAACATCTAGTCACAGATTGTAGATTAAGAAAGCCAAAA TGTGTcgttaatttctttaaaaatcacCCACAGTATTAAATATTCTTCGA TTCTTATTTCATTTTCCAGCCACCACCAGGGAATATGGAAGTTTTAGTAC AGTTTATACAGGACAATCGGATGAGGTTGACCGACATCTTTTTCCGATTG GATAAAGACAGAAACGATAAAATAACAAAAGGCGAGTTTGTCAAAGGTTT GATGAATGCAGGTCTGAAAATGGATAAGGTAAGACTCAAGCTTTCGATAT TGGTACATAAGTATACAGGGTGTGCTAGAAATAAGTTatcctctttgatt tgatatcgCAGGTAGTAGaaaagaagtttttcaaaaactctTTCGGAATT GTTCAGAAGAAAGCCTAACTTAAGTTTTGTTGtgttactttttaatttta cttcattggctTAAAAGCTGTGTCCAGAAAACAAAAACGTCAATTTAATG TCAAAAAGGCGGAAAACGAGGGTATCAatttatgaaaacaaaagtttctt ttaCCAAATTATCGCACCCGGTAACTAACCTGGTCTTCTTGTGGTGCCAA AAAGAATAAAACTCTATTATCTATTATTCATCTAAGCATGATAAGATTTC GGATTTGAGCTAAAAACATTAGAATCTTAAAATTCACCAGGTCTTAAAAG CGAAATATTTTTATGGTATAGAACAAAGAAACGCAATTACAAGCGTCAAC CTCAGTGCAAACTACATATTCTCAAGAGCAGAGCGTGTAGTACGGAATAT ACATTgcctttcatattttttttttcacttcagGGGCAGATAACAAATCT GATCGATCAACTTGACACAAACAATGATGGAGACATAGAGTTTAGGTGAG AAGGGTTATTTTTAGATCATCTGCTCAAATCGTTCGTTCATATTTCTCAC GTCAATTcttactttttctgaaaaacacGTTACGTAATTCACTAAAATGA CCAATGGGAAAGGCTACTTTTCTAGGTACTCTATTTAGCCCGGGCACAGG GTATATCTGAAGACTTTCTAACATCGCTTCtcaatttcgaaaagaaaatt acaTACTACAatggaatctccataactcgatcaCGCACATTGCtaaaggg accataaaacttgttggagttaaggagacattcaagtGATAGAGGTTCTA GCTATAGATTGtatatgtttctttttttttttttctttcagtgagATTTT GAGTGGACAACAATTAGTGATGAACGAACGAAGATTTCAAAAGAAGATAA CAAAGAAAACCGAACAGATGGAAAAAGACAGTATACGTTTACCTAAAATT CATGGCTTCTAACATACAAAAAACTGGACACAAGCATGCATAGACATTAC ATTGTGGCATATTGAAACATTTGAACTGTTTAAACATTAGCTCTATATAA ACCAATAGAACTTTTTCTAAACCCTaggcatttttttttaattttcgaaa gCTCCAGGCTTAAATGTGATGGATATCTGCAATACCATATTattaagaaa attaattttggcgagcagcagaaatctttgaaaatatgtaaactGGCGAG GAACTTACATTGGCAGAGTAGCGAACTGGTAATTTTGTCGAGAACTGGCA CCAATGTCGGTGTAACGAGATTCTATTTAGCCCAAAAATGAGTATTCTAG ACAAACATTATGGAATTTTGAAtcgaaaaatatgtaaaaactcactttta gtgacttttagaaaaattcgccaaatttggTGCACA

Coding sequence (CDS) from alignment at sc0000128_pilon:450432..460367+

>MSTRG.14943.3.p2 ID=MSTRG.14943.3.p2|Name=MSTRG.14943.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1053bp|location=Sequence derived from alignment at sc0000128_pilon:450432..460367+ (Clytia hemisphaerica_ch_hm2_pilon)
GATCTATTTAGCTTATTTAAAGAAATATTCATTTTCCTAGAGGTTGAAGA
AGAACCTTTAGATTCTTACGGGCGAACCGTATATCGTGAAGAATGCTTAC
GTCAGCAAATTATACCTATTACGTCATTTATCAAGCAATTACCtgaagaa
aaaatgacattgaaATTTCGAGGATTTAATGAAAAAGCTTCAAATGCACT
CTCATCAGCTCTTTCGgatttaTCAGAAAATCAACTTGGTAATGCAGTTG
GAATCAAACTTGGAGAAATGTTGCTCACAAACATATACATGAAAACACTc
attttgaaagtGGTTGAGAAGAAGCATGGATTTTATGGGAGATTTattta
aGATCTATTTAGCTTATTTAAAGAAATATTCATTTTCCTAGAGGTTGAAG
AAGAACCTTTAGATTCTTACGGGCGAACCGTATATCGTGAAGAATGCTTA
CGTCAGCAAATTATACCTATTACGTCATTTATCAAGCAATTACCtgaaga
aaaaatgacattgaaATTTCGAGGATTTAATGAAAAAGCTTCAAATGCAC
TCTCATCAGCTCTTTCGgatttaTCAGAAAATCAACTTGGTAATGCAGTT
GGAATCAAACTTGGAGAAATGTTGCTCACAAACATATACATGAAAACACT
cattttgaaagtGGTTGAGAAGAAGCATGGATTTTATGGGAGATTTattt
aaGATCTATTTAGCTTATTTAAAGAAATATTCATTTTCCTAGAGGTTGAA
GAAGAACCTTTAGATTCTTACGGGCGAACCGTATATCGTGAAGAATGCTT
ACGTCAGCAAATTATACCTATTACGTCATTTATCAAGCAATTACCtgaag
aaaaaatgacattgaaATTTCGAGGATTTAATGAAAAAGCTTCAAATGCA
CTCTCATCAGCTCTTTCGgatttaTCAGAAAATCAACTTGGTAATGCAGT
TGGAATCAAACTTGGAGAAATGTTGCTCACAAACATATACATGAAAACAC
TcattttgaaagtGGTTGAGAAGAAGCATGGATTTTATGGGAGATTTatt
taa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14943MSTRG.14943Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14943.3.p2MSTRG.14943.3.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14943.3.p2.exon1MSTRG.14943.3.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14943.3.p2.exon2MSTRG.14943.3.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14943.3.p2.exon3MSTRG.14943.3.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14943.3.p2.exon4MSTRG.14943.3.p2.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14943.3.p2.exon5MSTRG.14943.3.p2.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14943.3.p2.exon6MSTRG.14943.3.p2.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14943.3.p2.exon7MSTRG.14943.3.p2.exon7Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14943.3.p2.exon8MSTRG.14943.3.p2.exon8Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14943.3.p2.exon9MSTRG.14943.3.p2.exon9Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14943.3.p2.exon10MSTRG.14943.3.p2.exon10Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14943.3.p2.exon11MSTRG.14943.3.p2.exon11Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128_pilongenomesc0000128_pilon:450432..460367 +