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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:160774..164240- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14427.1.p1 ID=MSTRG.14427.1.p1|Name=MSTRG.14427.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3467bp|location=Sequence derived from alignment at sc0000120_pilon:160774..164240- (Clytia hemisphaerica_ch_hm2_pilon)
CTGAAATCTAACTATCAGGTTCTTTTGGGCGTCTACCAGCGAAAGTAATT
TTTGAACAATATTGAAACTGTTTTGCTCTCGAGAAGAACGACTGTTTTAG
TCTCAGTGGGGTAGATTTTTGAGAAAATGTCCGTTATGGATTTGTATGAA
ATTGTTAAATTAGAAAGATTGATGAAAAATCTGTTACGAAAATCAAAAAG
AATTCCAGTCACTAAATCTGACGATGTAAGTCATAATTCAAGAGTAGTTT
ATCATGCTGAAAGGAAAACAAGGGATTGCGCGAATTAGGCAGCTTTGCTT
TTTCCAGGTGGCTAGTGTGCTGGATTTCATTTTGTACAAGATTTTACTTT
TATCCGGCGGTGGCGACCCATACAAAGAAGCCCGTAAAGGAAAAAACTGT
CTAAAACATCAGAAGATGAGCTCCCAGACCCCTTATTTTTTGGCAATATT
TTACGAGTATGAGATTAAAAACTATAGCCCCTCTTCTTCTTTTTGTGTTT
CAGGTTGACCATTCAGATTTGACGGATGATCAGATCGCGGAATTTCGTGA
AGCGTTCGCCTTATTTGACAAAGATGGTGATGGAACCATTTCATCCACTG
AACTTGAAACTATTTTAAAGGTGCGTTCTGATATACTATTTTGTGACACG
AGGTTCAATTAAACTTCCAGAGCAAATTACCAACAACGATACAAGCCTCA
GATTCTAAAACGTTAAAGCTAAGAAAAAGCCTCTCCAGTCCGAATGATCT
CTTGTTCAGTCCATATGAAAAATATGAAAGGATAATAAGAACAGCCCATG
GGATGACGTACAGAACATACAGGTAACAACATTGTAACAACGATAGATTC
AAAGTGCTACGTGGCTGTTGGTGCGAGTTTTTTCAGATAGCTTTTAGTCA
CAGTGTATTCCATTACCAGATAAAAGAGGATTGGGTAAATAATGAGAGAA
CTCCGTCACGGGAATATTTTTTTAGACGTTTATCTTCTGGATCACGGCTT
TCATTCAGCTTGAAATGAAATATTAAACCTTTAAAGTTACTAAAATATTT
CTTAGTAGAACTGTCGATCTTATCCCAGCTAGCACACAACGTTGTTTTAA
CGTTCATCTAACGTTATATGGACGTTGTGAACGTTAGATAAAAGTTGACA
CAACGTTGTGTGTCAGCTGGGATGGGCCAAGATTATACATTTATGCAATG
TTCTTACATTTTTTCTCCAGAGCTTAGGACAGAAGCCAACACAATCAGAG
TTGAGAGATATGATCAATGAGGTGGATGCTGATGGAAATGGAACAGTGGA
TTTCAGTGAATTCTTAACCATGATGGCTACCAAGAATAAAGGATCCAGTG
CTGATGATGAAATTAAAGAGGTTTGTATGTCCAATCTAAGATAAATGATT
CGTCATATCCTTAATTTAAACAATAAAATTAATGGCAAAAGCCCGAGCTT
TTTTGAGTGCTTTCACTAAAACATTACGACACGAGCATTAACAAAACATT
AAAAAAAATTCTCGGAAAATTGTGGGTTTGCTAAGTCTTTTCTGACGTCA
CTATCTATCTGCGGCAAAAAGATTTTACCATTTTTTCATTAATAACTCGT
CATCTAAAATAGATAATTTGAATTCCTTTTCAACACTATTATTCACAGGC
GTTCAGTATTTTTGACAAAGACGGTAACGGCAAGATCAGTGCAGACGAGT
TGAAGAATGTGATGATAAATCTTGGTGAGAAATTAACCGATGAAGAACTG
GATGAAATGATTAGAGAAGCAGACATCGATGGTGATGGAGAGGTCAACTA
TGAAGGTCAGTATTCTTGAATTCGTGTGAAAAGATGTTGAGGTCATCAAA
CATCAGAGCTAGTCAGGAAAAATTCATAACTAACTAATTGACTCCCTCAA
AGGGTCATAAATTATTGAAATTTGGACTAAAACTTGAAAACTTTGCCTGA
AACTTTGGGGAAAAAGTCTCTTTAAGGGTGAAAAAAACGTTAAAAAATGG
ACAGACTTTTCTATAGGTTTCTCTAAGGGTCGATTTTAGGAATATGACGT
ACCCGTCATCTCGAAAACCTAGTAACCCCCTCCCAGGAAAGATGCTGCCC
AGCTGGCACAGAAACGTTGTTTTAACATTCATCAAATTTTACATGAGCGT
TAAGCTAAGGCTACACTGATAGATAGTTTTTTCAGGCAGCTGCAATGCAA
TTAACGTTGCGTTGCAAGCGCGCGAAAATTGCAAAATGTAGCACGTCAAT
TTTTTCTCCAATTGCTCTGCAACGCAATAAAAATATTGCAGAACATATTG
CAAGTGTCTGCAACAAAACTGTTTTTTTGACGTTTTTCCTGCTTCCTTTT
TTTAGATGGCTAGAAAGCAACAATTTTCAGGCGGCTGCAATGCAACAATT
GCATTGCAGCCGCCTGAAAAAACTATCACTGTAACCTTAGCTTTAGATGG
ACGTAGGTTGTTGTGACGTTCTGTGCCAGCTGGATGAGGGCTAGTCAGGA
AAAGATCCTTGTAAAAACAGCACGATCACGAAAATATTTTGATATTGACT
GAAAACTGCTAATTCTAAGGTGGTAAAAGGCATAGAAGCACCGAAATTTG
TAAGAACGAACAAGATTCAGTACTTAAATACACAAGTCTGAAAATTTCCC
TTAAATTTCTCTATTCTCGTGACCACTGAAGAATCTGGAAGATCCAATAT
TCCCCAATATAATGAATATGAAAGTGCTACCAAATGTCTAAACGTGTGTT
GTGTGATTTGGACTATTTTTATTATAGTGCACACTGAAAAACTTTTGATG
ACTTTGGCGATAAAGGGTGGAGGCGTAAGAGTTTGCAGGGTTTTTACGTT
TCATCAAATATCGAAAATTGATCGATCTGATTTGGATTGAGGGCATAAAT
ATGACCATTTTTTAACAGAACTGAATGCTAGTCAGGTTTTTCTTTGAAAA
TTGCACGTATTACGATAAAATCACTAGGATTATCTTCAGCATCAACTTTA
TAAAGCCGTCTTTATTTTTTTAATTCAGAATTCGTCAAGATGATGTCTGC
TGGGACTTAAAAGTGAAATGACATTTTAAAGAAAAGTATTCCAAATGTAC
ATTTTTATATAATAATTCAACCAGCTATCAGTCGATATGACCAATTGGAT
TGACTGTACGGTCACTTCCTATTGATGTTAATCTGGAACAAAAAATCGCA
GGGATCCAGATCTTGGCTTCGCGTATACAAGGAGGATTTGACATTGTCTT
GGGTTATTATAAAGAACTTTTAGTTATTTTTAGTCTAACCATAATAATTT
TGAAATAGTTGACATATTGTATATTTATTTCAAATAATATTTTGCAAATT
GTAGAAATATGGTATTTGAATTGATCTATCAAAACAAAGTACCAAACCAA
ATTATCAAGGTGAAGCTACAATTTTCTTTTTTTTATTGAGAGTACATTGC
ATGCAACTTAGTCAAGC Coding sequence (CDS) from alignment at sc0000120_pilon:160774..164240- >MSTRG.14427.1.p1 ID=MSTRG.14427.1.p1|Name=MSTRG.14427.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2775bp|location=Sequence derived from alignment at sc0000120_pilon:160774..164240- (Clytia hemisphaerica_ch_hm2_pilon)
AATTCGTCAAGATGATGTCTGCTGGGACTTAAGCGTTCAGTATTTTTGAC
AAAGACGGTAACGGCAAGATCAGTGCAGACGAGTTGAAGAATGTGATGAT
AAATCTTGGTGAGAAATTAACCGATGAAGAACTGGATGAAATGATTAGAG
AAGCAGACATCGATGGTGATGGAGAGGTCAACTATGAAGAGCTTAGGACA
GAAGCCAACACAATCAGAGTTGAGAGATATGATCAATGAGGTGGATGCTG
ATGGAAATGGAACAGTGGATTTCAGTGAATTCTTAACCATGATGGCTACC
AAGAATAAAGGATCCAGTGCTGATGATGAAATTAAAGAGGTTGACCATTC
AGATTTGACGGATGATCAGATCGCGGAATTTCGTGAAGCGTTCGCCTTAT
TTGACAAAGATGGTGATGGAACCATTTCATCCACTGAACTTGAAACTATT
TTAAAGATGTCCGTTATGGATTTGTATGAAATTGTTAAATTAGAAAGATT
GATGAAAAATCTGTTACGAAAATCAAAAAGAATTCCAGTCACTAAATCTG
ACGATAATTCGTCAAGATGATGTCTGCTGGGACTTAAGCGTTCAGTATTT
TTGACAAAGACGGTAACGGCAAGATCAGTGCAGACGAGTTGAAGAATGTG
ATGATAAATCTTGGTGAGAAATTAACCGATGAAGAACTGGATGAAATGAT
TAGAGAAGCAGACATCGATGGTGATGGAGAGGTCAACTATGAAGAGCTTA
GGACAGAAGCCAACACAATCAGAGTTGAGAGATATGATCAATGAGGTGGA
TGCTGATGGAAATGGAACAGTGGATTTCAGTGAATTCTTAACCATGATGG
CTACCAAGAATAAAGGATCCAGTGCTGATGATGAAATTAAAGAGGTTGAC
CATTCAGATTTGACGGATGATCAGATCGCGGAATTTCGTGAAGCGTTCGC
CTTATTTGACAAAGATGGTGATGGAACCATTTCATCCACTGAACTTGAAA
CTATTTTAAAGATGTCCGTTATGGATTTGTATGAAATTGTTAAATTAGAA
AGATTGATGAAAAATCTGTTACGAAAATCAAAAAGAATTCCAGTCACTAA
ATCTGACGATAATTCGTCAAGATGATGTCTGCTGGGACTTAAGCGTTCAG
TATTTTTGACAAAGACGGTAACGGCAAGATCAGTGCAGACGAGTTGAAGA
ATGTGATGATAAATCTTGGTGAGAAATTAACCGATGAAGAACTGGATGAA
ATGATTAGAGAAGCAGACATCGATGGTGATGGAGAGGTCAACTATGAAGA
GCTTAGGACAGAAGCCAACACAATCAGAGTTGAGAGATATGATCAATGAG
GTGGATGCTGATGGAAATGGAACAGTGGATTTCAGTGAATTCTTAACCAT
GATGGCTACCAAGAATAAAGGATCCAGTGCTGATGATGAAATTAAAGAGG
TTGACCATTCAGATTTGACGGATGATCAGATCGCGGAATTTCGTGAAGCG
TTCGCCTTATTTGACAAAGATGGTGATGGAACCATTTCATCCACTGAACT
TGAAACTATTTTAAAGATGTCCGTTATGGATTTGTATGAAATTGTTAAAT
TAGAAAGATTGATGAAAAATCTGTTACGAAAATCAAAAAGAATTCCAGTC
ACTAAATCTGACGATAATTCGTCAAGATGATGTCTGCTGGGACTTAAGCG
TTCAGTATTTTTGACAAAGACGGTAACGGCAAGATCAGTGCAGACGAGTT
GAAGAATGTGATGATAAATCTTGGTGAGAAATTAACCGATGAAGAACTGG
ATGAAATGATTAGAGAAGCAGACATCGATGGTGATGGAGAGGTCAACTAT
GAAGAGCTTAGGACAGAAGCCAACACAATCAGAGTTGAGAGATATGATCA
ATGAGGTGGATGCTGATGGAAATGGAACAGTGGATTTCAGTGAATTCTTA
ACCATGATGGCTACCAAGAATAAAGGATCCAGTGCTGATGATGAAATTAA
AGAGGTTGACCATTCAGATTTGACGGATGATCAGATCGCGGAATTTCGTG
AAGCGTTCGCCTTATTTGACAAAGATGGTGATGGAACCATTTCATCCACT
GAACTTGAAACTATTTTAAAGATGTCCGTTATGGATTTGTATGAAATTGT
TAAATTAGAAAGATTGATGAAAAATCTGTTACGAAAATCAAAAAGAATTC
CAGTCACTAAATCTGACGATAATTCGTCAAGATGATGTCTGCTGGGACTT
AAGCGTTCAGTATTTTTGACAAAGACGGTAACGGCAAGATCAGTGCAGAC
GAGTTGAAGAATGTGATGATAAATCTTGGTGAGAAATTAACCGATGAAGA
ACTGGATGAAATGATTAGAGAAGCAGACATCGATGGTGATGGAGAGGTCA
ACTATGAAGAGCTTAGGACAGAAGCCAACACAATCAGAGTTGAGAGATAT
GATCAATGAGGTGGATGCTGATGGAAATGGAACAGTGGATTTCAGTGAAT
TCTTAACCATGATGGCTACCAAGAATAAAGGATCCAGTGCTGATGATGAA
ATTAAAGAGGTTGACCATTCAGATTTGACGGATGATCAGATCGCGGAATT
TCGTGAAGCGTTCGCCTTATTTGACAAAGATGGTGATGGAACCATTTCAT
CCACTGAACTTGAAACTATTTTAAAGATGTCCGTTATGGATTTGTATGAA
ATTGTTAAATTAGAAAGATTGATGAAAAATCTGTTACGAAAATCAAAAAG
AATTCCAGTCACTAAATCTGACGAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:160774..164240 - |
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