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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000118_pilon:809626..813125- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14319.3.p1 ID=MSTRG.14319.3.p1|Name=MSTRG.14319.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3500bp|location=Sequence derived from alignment at sc0000118_pilon:809626..813125- (Clytia hemisphaerica_ch_hm2_pilon)
AGGGAGTATAAAATGCTGTTGTTTACTGGATTAACCCAGAACGATTTACT
TTACATATTACATCCAGTTTGGATATTGGGCAAGGAAAAACGACACAAGA
CCAATCGTTAGAATTAGTTACCCAATCTGCCCATACTTCAGGACATGAAC
AATCTCCAGTCTTGTAAGAATCTACAAATTGACTTTCATTGGGTCTAAAC
GTTTGCTAACTATATGACCTGTCCACGTCTCAATCAGTTAATGAAATATT
CTTACATTTCTTACATAAAGCCGGTTTTAGCTTTGTATTGGTTTCAAAGA
CTCCCGCACGAGGAGGGCATTCCAAATTAGCTTTAGAGAAATTAAATGGT
TTAGAAATTTCGGTCAAACAATCTAAGTAAATATTTATTTTTATGCTCTT
TTAGACCACACAATCTTCTAAACAAATCGGCCAACAGTTTACGAAGCAAG
CTCAATTTACAAAGTACACCGCCACATTTTCAAAAGTCACCGCATACCCT
AAATAAATCACAACGAAATTCCCCGACTATCACATCGTCTGGTAAAACGA
AATCGCCACACGTCCATAACAATAATTCAACATTTAATAGTGTTAAAAGA
ACGTCCTCAAGGTAAGATTTTCCAGAACAAATCAATTGTGATATTTTTCA
CTGAAAGTTGTAGCTCAGAGGGTATTCTCGTTTTAACTGAATTAAACTGA
GGCGATTCAGAGATGAATTAAGGAGACTTGAAATCATGTCTTTCAATATA
TCGATCAAGCATGACAGTTCTCTTCTATCTAGTTTTTATCTTATTGTTGT
CCTCTTATTCTTATTAGAAGAGACGCAGAGGAGATCATGAGCGAGCAAGT
CATCGACAATAGTAGTATAATGGGTCAGTTTATATGTCATAATTTTAGAC
AGAATTTAGAGAAGAGCTATATTCGTCGTTTTATTAGAATACTTAAGACT
GTTTGTCTAAAGTTCTTTTAGATAAGTTACACCGGGTTGAACTTTATTTA
GATGATAGTCTAACCTAAATTTTACTTGTATTCGGATGATCAGTTCAAAA
GCTATTGTCATTTAATCACCTATTTTTAATCTTATTTTGTATTCTTCGAA
AGGTGATTTTTTACACTGAATTTTAGCTACACCTTTTAAACCGATCGTTC
TAATTTAAAAAGTAATACATTAAAATTTAAACCAGACCCCCTCTTCTATA
TTCAAGCAAAGTATGGCTCGCAGATTAGTTTGACAGGTCTGAAAAAACTG
CCAAACATCCGTAGATTTTTTTTAAGCACCCAGTACATGAAAAAGATTGA
GAAAAAATCGACCGAATCATTTTTATTTTGTTTGCTATTTTCCAGTATAG
TTGAATAACCATTCCAATCATTTCATTTAGAAAAACTTGACAAACTCTAT
GAAAGGCAAACAAAAATCATGGACGCAATTGTTTTGCTGAAAAATCACGT
CGATGAACGTTTTGGAGCTCTTCCACTTCAAGAGCAACTTTTTGAAATAT
CAATGGTCACAACTCAAGAAGAAATGGTTGATCTTGAGCAAAATCTTGCC
GACCAAGAATACCTTGACAAATTTGTAAGAAATTATTGCTTTTACATTAA
AGGGGCACTCTGCAGGAAAAATTTTTCCGAAATGTTTTTTATGCACTCAG
GGATCACGAAGCAAACGGTTTTTTTTAGGATTTACTTCTACTTTTTTCAC
GATCGTGTTTAAAAAAATATCTTATACTATGCTCTGACTCTTTTTTCAAA
CAAAGTTTTTTTGCAGTGATAGTGCTACTCTACCTGGATGTTTTTCTTTT
TAACCTCAAATCAAGATTAGAAATTGTTAGTTACTGTTCATTTCATACAC
CCCTTTCTCACAGACCCGGTGGGATTTTTTCAGGTGGTTGGGATAAAAAT
AACGGGCTGAAACTCAATAGGGATTGATATTTCTATATTTCTTATAGCTG
GGGATTTCAGTTCTTTTGTTTTCAAGTCAGATAATTCAGTGGGGATAAGA
AAAATAGCATATTATTTTATAGTATTTTTCAGTGAGGATTGGCTTATTTG
TTTATTTTCAGTGGGGACAAAAATGGGAACAATTTTCCACCGGGACGATA
TTTTGGCCAATTTTTCCGGTGGGAAGGAGTCCTAGTGGGTCTGTGAGAAG
GGGGTGTATTTCATATATCTGAAAAGGAAAAATATATTAAAATTTCAATT
TTCAGTGGAGTGCCCCTTTAAACTTACATCTAAATCGGAACAATGTTCGT
CTTTTTGTTTAATAAGCATAACGCTTGTAAGTGTCCCTGGCTCTAGAGTT
GGGTTTTAAAACAATGGATGAATTCTAAAGTAAATGCTGGACCTCACCAA
TAGACAGACACTTAATGAAACAATTATTTTATTAGAAATCGCGCATTTCA
AGAATTGGTGGCGAAGACTTTGGTTCAGCAATCATCGAAATTATGGATAG
GTAAAGACAATTTTTCTCTGCATTTTCCATGGTCTTTCAGTAAGTCGTGA
GTCTTAAAAATCCTTTACTGAATATGTAAACACTGGTTCAGTGTTATTAT
AAATTAATTAATACCATCGTAAAAATAGAAGAGTCGAGGGCGAGCGAAGT
ATATCATTAATAACCCTATACTAACTGTTTATGAAGGCAATACCATGTAA
TACTACACCTCTGCCTTAAAGCCAATATGAAGTTTCAAAGTATTGAAGTT
CTACTAAAATATTTGCTCCTGATTCAAACAGAACGTCAAAAATTGCTTTT
TGATTCAATTTTTCACCTCGTCATTTCAATATTTTATCTTTCATTTAGAT
ATTTCTCGAAATCGTTCCTGAGCCTGTGCAATATGGAAGGTGCTAATGGC
AAATTCGCCTTTAAAAATTCCTTGGCATACAAAGCCATATCTGGTAAGTT
ATTCATGATATGATGAAATTCATGATATGCACCACTGCAATGTCTTCTGA
CATTACATCACGGAACCAATCTCTCATTGGTTGTAAGTGACGTAAAATCA
GTCAATACGTCACTTTGAACCAATCAGCTATTAGGTGGAATGGAAGACAT
TGCAATGGTGCATATCATGAATAAATGTAAACCAGTAACATCTTTTTCAT
ATTTCAATTCGGTTAGTCGCAGTTCCACCCCTGTTCAAGATAGGATCTAT
TCATTCATGCTATTAACTATGTTAGTGATTTTGATCTTAGGGCTAGGACC
TACTAGATTCACCCTTCTTGAGTTTTAAAACAATTCTTCTGATTCTCTCT
TCAGATGTGATCACCACCCGATACTCCTCAACAACCGATCATGATGTGGC
TAAGAAGGTGCAAAACAAGTTACGGAATGCTCCAGCCCAAAAAGGTGGTC
TCGGTCGCAAAAAGAAAAATTGATTTTTAGGATTTTCAGTATTTTAAAAA
TTTCGTCTCGCAAAATTCAGAAAACAGCCTTCAGTTGCAACGGAGATCTT
GGCATTTTACAGCGAATCTTTTGTAACTCATGAATAAGCTCGAATAACCC
Coding sequence (CDS) from alignment at sc0000118_pilon:809626..813125- >MSTRG.14319.3.p1 ID=MSTRG.14319.3.p1|Name=MSTRG.14319.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2550bp|location=Sequence derived from alignment at sc0000118_pilon:809626..813125- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGATCACCACCCGATACTCCTCAACAACCGATCATGATGTGGCTAAG
AAGGTGCAAAACAAGTTACGGAATGCTCCAGCCCAAAAAGGTGGTCTCGG
TCGCAAAAAGAAAAATTGAATATTTCTCGAAATCGTTCCTGAGCCTGTGC
AATATGGAAGGTGCTAATGGCAAATTCGCCTTTAAAAATTCCTTGGCATA
CAAAGCCATATCTGAAATCGCGCATTTCAAGAATTGGTGGCGAAGACTTT
GGTTCAGCAATCATCGAAATTATGGATAGAAAAACTTGACAAACTCTATG
AAAGGCAAACAAAAATCATGGACGCAATTGTTTTGCTGAAAAATCACGTC
GATGAACGTTTTGGAGCTCTTCCACTTCAAGAGCAACTTTTTGAAATATC
AATGGTCACAACTCAAGAAGAAATGGTTGATCTTGAGCAAAATCTTGCCG
ACCAAGAATACCTTGACAAATTTATGAGCGAGCAAGTCATCGACAATAGT
AGTATAATGGATGTGATCACCACCCGATACTCCTCAACAACCGATCATGA
TGTGGCTAAGAAGGTGCAAAACAAGTTACGGAATGCTCCAGCCCAAAAAG
GTGGTCTCGGTCGCAAAAAGAAAAATTGAATATTTCTCGAAATCGTTCCT
GAGCCTGTGCAATATGGAAGGTGCTAATGGCAAATTCGCCTTTAAAAATT
CCTTGGCATACAAAGCCATATCTGAAATCGCGCATTTCAAGAATTGGTGG
CGAAGACTTTGGTTCAGCAATCATCGAAATTATGGATAGAAAAACTTGAC
AAACTCTATGAAAGGCAAACAAAAATCATGGACGCAATTGTTTTGCTGAA
AAATCACGTCGATGAACGTTTTGGAGCTCTTCCACTTCAAGAGCAACTTT
TTGAAATATCAATGGTCACAACTCAAGAAGAAATGGTTGATCTTGAGCAA
AATCTTGCCGACCAAGAATACCTTGACAAATTTATGAGCGAGCAAGTCAT
CGACAATAGTAGTATAATGGATGTGATCACCACCCGATACTCCTCAACAA
CCGATCATGATGTGGCTAAGAAGGTGCAAAACAAGTTACGGAATGCTCCA
GCCCAAAAAGGTGGTCTCGGTCGCAAAAAGAAAAATTGAATATTTCTCGA
AATCGTTCCTGAGCCTGTGCAATATGGAAGGTGCTAATGGCAAATTCGCC
TTTAAAAATTCCTTGGCATACAAAGCCATATCTGAAATCGCGCATTTCAA
GAATTGGTGGCGAAGACTTTGGTTCAGCAATCATCGAAATTATGGATAGA
AAAACTTGACAAACTCTATGAAAGGCAAACAAAAATCATGGACGCAATTG
TTTTGCTGAAAAATCACGTCGATGAACGTTTTGGAGCTCTTCCACTTCAA
GAGCAACTTTTTGAAATATCAATGGTCACAACTCAAGAAGAAATGGTTGA
TCTTGAGCAAAATCTTGCCGACCAAGAATACCTTGACAAATTTATGAGCG
AGCAAGTCATCGACAATAGTAGTATAATGGATGTGATCACCACCCGATAC
TCCTCAACAACCGATCATGATGTGGCTAAGAAGGTGCAAAACAAGTTACG
GAATGCTCCAGCCCAAAAAGGTGGTCTCGGTCGCAAAAAGAAAAATTGAA
TATTTCTCGAAATCGTTCCTGAGCCTGTGCAATATGGAAGGTGCTAATGG
CAAATTCGCCTTTAAAAATTCCTTGGCATACAAAGCCATATCTGAAATCG
CGCATTTCAAGAATTGGTGGCGAAGACTTTGGTTCAGCAATCATCGAAAT
TATGGATAGAAAAACTTGACAAACTCTATGAAAGGCAAACAAAAATCATG
GACGCAATTGTTTTGCTGAAAAATCACGTCGATGAACGTTTTGGAGCTCT
TCCACTTCAAGAGCAACTTTTTGAAATATCAATGGTCACAACTCAAGAAG
AAATGGTTGATCTTGAGCAAAATCTTGCCGACCAAGAATACCTTGACAAA
TTTATGAGCGAGCAAGTCATCGACAATAGTAGTATAATGGATGTGATCAC
CACCCGATACTCCTCAACAACCGATCATGATGTGGCTAAGAAGGTGCAAA
ACAAGTTACGGAATGCTCCAGCCCAAAAAGGTGGTCTCGGTCGCAAAAAG
AAAAATTGAATATTTCTCGAAATCGTTCCTGAGCCTGTGCAATATGGAAG
GTGCTAATGGCAAATTCGCCTTTAAAAATTCCTTGGCATACAAAGCCATA
TCTGAAATCGCGCATTTCAAGAATTGGTGGCGAAGACTTTGGTTCAGCAA
TCATCGAAATTATGGATAGAAAAACTTGACAAACTCTATGAAAGGCAAAC
AAAAATCATGGACGCAATTGTTTTGCTGAAAAATCACGTCGATGAACGTT
TTGGAGCTCTTCCACTTCAAGAGCAACTTTTTGAAATATCAATGGTCACA
ACTCAAGAAGAAATGGTTGATCTTGAGCAAAATCTTGCCGACCAAGAATA
CCTTGACAAATTTATGAGCGAGCAAGTCATCGACAATAGTAGTATAATGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000118_pilon | genome | sc0000118_pilon:809626..813125 - |
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