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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:746321..754162+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14215.4.p1 ID=MSTRG.14215.4.p1|Name=MSTRG.14215.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7842bp|location=Sequence derived from alignment at sc0000117_pilon:746321..754162+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCAATGAAAAAGCTCATACATTGTAAATGTCTCctctttaaatttttga
aaaagtgaacATGTGAACTGAAACTTGTcaaaattataaagtttttgaag
TTCAACATGGCGTTTAAGAAAGATAGAAGTGTCGAGTAGTCATTGCTGGT
GCTTTGTTTACTAAAAGGAAAAAGGTTGGTCGAATTAATATTTCTTCTTC
ATTAGGTATAAGTAAGTTTTGTTTGCTTCCGTCAATTTGGTTTGTTTCCG
ACCAATGTAGTCCACTTCTTATTTTTCTGTACAATGTTGATATAAAGATG
GCAAAATCTTACTTCAATGAAATCTTTTCTTGGACACTTCAAGAGCAGCC
GCCAGCggatttttctgaaatatctgttctttttttccaggagagtaaat
tttagAGATAAATCTAGGAGATACTTGCCTTAAAACACCCAGTTAAAATC
CAGGAGTCGCCTTAAAaacatctgttcttaaaatccaggagcacatgTTA
CGGAGAAACACATGTAATTTTCCAGCAGACAATCTGCTCAACAAATCAag
gagctaaattgtgaaaaacacaaccagatgccagatttttggcaaaatct
tACTTCAATGAAATCTTTTCTTGGACACTtcaagagcagccgccggcgga
tttttctgaaatatctgttctttttttccaggagagtaaattttagAGAT
AAATCTAGGAGATACTTGCCTTAAAACACCCAGTTAAAATCCAGGAGTCG
CCTTAAAaacatctgttcttaaaatccaggagcacatgTTACGGAGAAAC
ACATGTAATTTTCCAGCAGACAATCTGCTCAACAAATCAaggagctaaat
tgtgaaaaacacaaccagatggcagattttttttccaagggaaCTTCGTA
ACTTTATTAATAAACAGTCTCATTTTCTAGGAACATTGTAACTTTCTTAG
ggaatagctgttatatttttccaggagcataatctttctagagaacagat
atacattttccaggagtcccgTTTTCCTCCAGAACAAAGGTATATTCTAG
GAGAGTCCAGAATACAAAACAGTtcgttttttccaggagaaagggacctc
aagaacagatatttcatattttctagccggtggctgctcttgacACTTTC
ATTTTATAATGACATGAGTTTCATTTCAACAACCGTACTGTTTATAAAGA
GCGTGAGATTCTAAGCAAAAAGTATTACAAGTATCAAACTTGAACTTGAC
ATGAAGCCAATTGAAGTTTGAAATACTATCAGATTAAATACgagtaatga
aaattttagcatgACTCTATTTGGCCTGTGGATGTAcccaacataatttt
ttctctccATAGATTTGGACTTGGTCTTGAAATTTCACaagtttttctaa
ttttgattacCTTTGTCTTTTCCTTAACACTGCCAAATTATCTTGTCTTA
TGAGTACTTGAAATACTTCGAATCATCAACCTTTGTACGAAAATTgcctt
taaatttttaaatttagaatttgcgttcaaaagacAATCTGCTAATCTTC
AGAGATCttgactttcatttcatcatggatattcttaactttttgggaaa
aatcatcttAAAACAATCTTACGGTATttttaggttaggatccaaatTCA
ACCACACACCTGACGAACAAAATGACATTATTGTAAAAGTAGTGATTCTT
ACTGGGATTAATCGGTAATTTACAGCTCTAAAAATGATATTCTGTTGCCA
AATTCATGAtgaattcataattttttggcCCATTTCATTACGAAGACTCT
CATaagatatgttcttataaaaaaacgtgtacgggTTTACGATTGCCTTA
AAAAAGGACACGTttcggtacacgtttttttataagaagaaactataaag
gaacataaggcttcaatggcaaaaaatgttaagaacaagctaagaacatt
ctaaggctttgtggactcaaaaacagccaatttcttatagaaaaatgggt
taaaatagtcacaaaatggtgaacattttgagaacatttttagtcttgaa
acccaaaaagttaagaacatccgaaggcttcaaaaaaattttctttggat
gTTGTGTATTTCACAATGTCACCCTTTGCAAGCAGAGGGAAAATTAGTAA
TTCCTTTGCTGACTAGACGAAAACTcttgaaaaatttcgaaattatcAGG
ATGCTCTTCACCTACTAAACTTTAACAATTGCAATATGTTATTAAAGTAT
ATTCGCCAACCCTGGGGAAGTATTTTAACTTTTGACTGAAACTTTAAACC
AAAACTTTAAACACTtcttgaaatagaactttagtTTTTAGATACCATAT
GCTAAGTACATTTACAAGGGTGCTACAATAGAAGATTAGTAACGAAGAAA
TATTATAACATTTTGATTTGAACTAGTCTTGAATAtaattcagaaaaaac
ttttcaaggtcaaattcccaaaactctcaaattacaccatctttttaatt
tatgatttataagactttcctgaaaataatttctttgcAATAAATATGTT
GTAGGTAAAGAAAAGGTTGTGCGTTGTGCTGTCTAGTGCGAATGGCTTGA
CAGAAGATGTTGTCTTAAAAACACAGTCTCATTCTTGTAACCAGCTTGAA
AGACAGATTCCTTTTTGACATCTAACTTCTTTGTTTGCATACAGCAGATT
GAGCAAGAGGAGATCGAGTCACATATGGTCTTTCTCCCTCATTTCCTTAA
CTTTCACGTTTTACTATTATTTTAAACTTGAGCCAAATTTTACAAGAGTA
GTATTTTAACTTCGATGTGAAATTGACTTTTTATGCTTACTAGTTTCAAC
AAGAGGTATGAAATAGGTGCCTTCAGTTTGAAGGTTTGTTTCTGCTAGTA
ACAACATGTTTGAAGAGTGATTTAGGTTGAATAGTCCCTGCGAGGTTTAA
TCTCCAAGCTCCCGGGATGGGTACTAGGCGGTTGGCGGACGAGgagtatg
tgcggacgggacctccgaagaCAGACCATTAGAGAGactcttttgctatt
tttcctcttgaaatcaaaaaatttcctaaaaattgtgaattttccgaccc
ttcgAGAGACttttggaaggtgaaaaaaacagatgagatggagtttttat
ataagatactttaataattagTCATTTGAAGTTATAAatatgacgcgttc
tttagaaaaagtagcaaaattattttattactggttaacgaccaaccaaa
tcaaatcaaataagagcttgtaaaactccatctcgtcccaaaaaaaaacc
gacccttatcgTCCACACATGACCAGCATCCATTTTCGCCTAAATACTAA
TTAATAGTACTTAGATAGTTAAGCCGTTTTATCCGGGAAatctttttttg
gattttgttaTCACAGGGGAGATTcccttttatcaaatttagggaaaata
aacatttctcgtgaatttctattgttgtcatcttttctattttcttatta
cattaatctcaggtaggtccattcagcatgtagcttgtttagcctcaaat
tgttctttattttgactAAATTAGCTTTGTACCCTGATTTCACTAATTAG
ACACCGCTCAATAGTCTGTAAAAGATTTGTTCgtatatttttgtgttttt
gagcaTCATTGTTGATATAGAATTTTTCCAAATTAAGAATAAAAGGATTG
TAGCAAAAAAGCAATATCTTTAAGCAAACAAAATTATAACAATAGGCCAC
AAGCAAtttgaaacattgaattttttttcatatttttactaCCTCATCTC
ATTAACTGATTTGGTCATTTTTCTACACATGGatgttaaatttgaaaatg
ccaAACAATTGCTGGCGCAATAACACATCATTTAGGTTCCTATGTTTCGT
TATCCTCAAGGTTGCTAAGCTAAGTTGCTTTAATCTCTAACATTTTCCAG
GGCTAAAAATCAGCAGAGAGGTTCATTACAAAACAAAGTAAACCAAGTGA
TAAAGGGAATTTTATAATTCGgtttttaatttgataaaacGATTTGTATG
TTGGGTATTTTTCACGGTTATCTTTCACGGTGATGTTAATTCAAATGGAA
AATCTTCGTTGTATTTGTTTTTGGCTTAAGAAAACAGTTTCAAGATCTac
tcaacggattagaataggtggattaacttctctcgttgctcccaagagag
atccattgtcttcttattgttacaagaaaaatctgtaaatgactctgcgc
actcctcgtttagttttttcattgtttttataagaacaattttccaattt
atacagtttcgaaaacgaatttgtcctatgattcgatcaattttgatgat
tttgcaaatattttaaatcctgcacttaagttttagcatcaacaaacgct
agaccagttttaatgtaaatttttaatcttttgtcaatggcaatcttcag
ataagtgaaaattaacgtatggtctataactaagaaactatcgatgggtc
acgaatgggttgcatactggtgaaagaagactgtatttagaattaggaaa
ataaatttcaaattatttggctaatttctgcattggatagaaagggctaa
aaaagtgcattttcttatttaaaatgtaccacgtgatacgtaatgaccaa
tgaaaatgttgaaagtaatgattttttacaacttttttacaacttatcaa
gttttaattgctagcaaactcgtaaaaaagtttgataacctaacgaggag
tgttttctatgagttcttaatccacctattctaatccgttgatcTACTAT
AACTTGTGCGTagcttgaattttgaaagataGGATTTTTAATTATGCTTC
TTGTCATCTTGTGAGCTTGCGATGGCTATCATCAGCTTTTGAACAAATGG
AATCCCTCCCATAAAAGAGTATTTATAATTTGGTTTTCTTCTTGGGttac
aaaaaatagaaaaacatttgaaCCTAATTTAGGATCAAggtcttgaaaaa
atgaaaaagagatttattttgaagataAGTTACTCGTCTGTAATGGATTT
AGTGTTGGATTAAATAATGTGAATAGGTCTGtttttctcttcaaacattt
tcattttcttttttcgacccaactttttACGATGAATTCCAATATCCAAC
CTGGTTTTTCAAGACTCGTTTCATTTCATTCCATTCTTAGATGGGATAAT
CCTTAAGATAAATTTGTAAAGAGAAAATACTTCCGTCTTTTGATATGAAC
CATTCAATCATCAACTTGAGCACAAAGCAGTTAaatgatttgaaatttgt
atGACCAGAAATAGGATAATTTGGTTTCACGCATGCGTAAGAGGTACAAC
GTTCCCATTCATTTGTATAGAATTAAATCGCTTTAGTCGTGTTTGTGCCA
AAGGTGACACTTATGCATGCACCTATGTTATGGATGATGTTTAAGTTTTC
TAACAGATCTTCCCTGAGATCTTCCCATTCCAATTGAAAACGAAGAAgtg
tgaaaatgaaataaactaGCCGCTGATCCGAAAGCCACTATATTCTCCTT
TCGACTGATAAAGCGAGAAAAACTCATAAAAATTTAACtaattatttttt
agctttgaGAGTAACGTTTTCccgaaaaacaatttttaatttgaatatta
gactttgaaaaaaaactcgAATAAAACAAGGGACATGATAAAACTTTATC
GATTCGGGGAACATTACGAAGATACAAGCTTTATCATCAAACTCTTCAAT
ATCGAGACAATAAAAGGAGAGAGTCATGCGTGTACAATCTTTACTacctt
ttgatttgttttacgacatctatttttgattttttttcaggaatggTTCG
CAAGAACAAGAAGATCTCCATCAACGTCAGAGGGACTGTTTACGAAACGT
TCGAAGAAACGCTGCAACGTTTTCCACACACACTCCTCGGTGATCCCACC
TTACGTATCTCGCACTACGACGTCCAACGCAACTCTCTTTATTTCGATAA
CACGTGTGAAGCTTTcgacgccattttgttttattatcaatCGAACGGTT
GCTTGGTGCGACCGCCCTGGGTTCCCatggaaaaattcgaattcgaatgt
ttatttttcaaattgggtGAAAACGCGATCAAATCGATGAAAGAACGTGA
AGGTTATGATACGCAGAAAAAAGTGACGGTTAAAAACGAACGTAAAACGT
GTCGGCGTAAATTGTGGAATTTTCTGGAGAAACCAGAATCGTCGTTGATG
TCGAGATTGTATACTTTCTTATCACTGATGATGGTCTTTTTCTCCATCAC
GTTGGACTGTTTTGAAACCACTTTACCGGTACTGCCGAGCGACTACGACA
TCATGCAAGATAACTGGGAGAAAACCAAACTTTCTTTGAACACTTTTTTC
GCTGCCGAATTCATCATCCGATTTTCGGCATGTCCGTACCGACGGAAATT
CTGTAAAGCTTTCTTGAATATTGTTGACtttttcgccattttcccttcat
ttttgacgtattttttaGACCGTGAAAACACGCGTAGTATAATGTTTGTG
CGGGTGTTACGTACGTTACGTGTCTTACGTTTGATACgcttatcaaaaag
ttttcaaacgCTCTCCGTTGTACTTCATATATTGGTAAAAAGTTTGGCAG
ATTTACTAACGCTCATATTTTGCATGTTAATCTCGTGTACAATTTTTGGG
AGCATTATATACTATGCAGAACATTTCAGTGAAAGCCCTGATCAACGAAC
TTCGCAAATATCCAGTATACCTGAAGGAATGTATTTTGCCATGCAAACAG
TTGTCTCTATTGGTTACGGAGATATTGTCCCATCTTCGTTTGCTGGTAAA
ATTACTACAGCCATGACGGCTATTGTAGGGGCGTTAACAATGACTGTTCC
TCTCCTTTCGTTGGGCGGCAAATATTTCGCCACCTACACCAAGACTTTTG
ATGTCAATTTGAGCGCCGACCTTATCAACACTCCAGGACCGAACGTTCAA
AACGAAGAAGCGAAGAAGAGAGAACTTAACAAAACTACTAATGActtaaa
agatatttaaaaaacttattaatttattttatatatatgatatattctct
atattttacaatcaacatttttataaaaaagacaatcaaatatttgaaaa
ttgaatcagCGTTGaactcaatttttcaaaataaaatagttttgctaAAA
TTCAAGCTtgtctttaaaatgaaatgttttacAATAAGTTTTAGACTACA
AATGTCAGTCAATAGAATCTAATGACTTCTCCATTCGACTTAAAGAAATA
TGGCAAAGACCAGCCTTTCCACTTATGCATATACCTTGCAATGTTTATCA
TTCCTGCGTCAGAGGAAAACTACTAGTGTTAATTGTGCTTTGTTGaaatc
atttgaaaaatttctcttgGCATTCgatttgaaattaagaacaggtGTTA
CGTTCACGTCGAGCCACGTCTTTTAAACATATCGATAATTTTCTGCgtgg
tttttgttttgttcttagTGTCCACTGCAATTCGTTGACACACTTTGTTA
AAAAGTTCGACAACTTGTTCGACGTCGTTTGCGACGGAGACTTCGTAATA
TTCTGCTTGATGTTTGGTTGCCATGGTGACCCCGTCATACGTAGATACCT
CACGTTTCTGAATGAGATCGATTTGATTAGCTACGATAATAATTGCAGCC
TCGTTCCGATTCAAGATCCTAATCTTCCGAATAATAGCTTCGATGCTCTC
CAAACTTTTACGTGACGTCACAGAGTAAACTAAGATGAACGCTTCAGAAT
TGAGGTAAATGTCGTTgttctgaaataaaaagtacatgctat Coding sequence (CDS) from alignment at sc0000117_pilon:746321..754162+ >MSTRG.14215.4.p1 ID=MSTRG.14215.4.p1|Name=MSTRG.14215.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1218bp|location=Sequence derived from alignment at sc0000117_pilon:746321..754162+ (Clytia hemisphaerica_ch_hm2_pilon)
atggTTCGCAAGAACAAGAAGATCTCCATCAACGTCAGAGGGACTGTTTA
CGAAACGTTCGAAGAAACGCTGCAACGTTTTCCACACACACTCCTCGGTG
ATCCCACCTTACGTATCTCGCACTACGACGTCCAACGCAACTCTCTTTAT
TTCGATAACACGTGTGAAGCTTTcgacgccattttgttttattatcaatC
GAACGGTTGCTTGGTGCGACCGCCCTGGGTTCCCatggaaaaattcgaat
tcgaatgtttatttttcaaattgggtGAAAACGCGATCAAATCGATGAAA
GAACGTGAAGGTTATGATACGCAGAAAAAAGTGACGGTTAAAAACGAACG
TAAAACGTGTCGGCGTAAATTGTGGAATTTTCTGGAGAAACCAGAATCGT
CGTTGATGTCGAGATTGTATACTTTCTTATCACTGATGATGGTCTTTTTC
TCCATCACGTTGGACTGTTTTGAAACCACTTTACCGGTACTGCCGAGCGA
CTACGACATCATGCAAGATAACTGGGAGAAAACCAAACTTTCTTTGAACA
CTTTTTTCGCTGCCGAATTCATCATCCGATTTTCGGCATGTCCGTACCGA
CGGAAATTCTGTAAAGCTTTCTTGAATATTGTTGACtttttcgccatttt
cccttcatttttgacgtattttttaGACCGTGAAAACACGCGTAGTATAA
TGTTTGTGCGGGTGTTACGTACGTTACGTGTCTTACGTTTGATACgctta
tcaaaaagttttcaaacgCTCTCCGTTGTACTTCATATATTGGTAAAAAG
TTTGGCAGATTTACTAACGCTCATATTTTGCATGTTAATCTCGTGTACAA
TTTTTGGGAGCATTATATACTATGCAGAACATTTCAGTGAAAGCCCTGAT
CAACGAACTTCGCAAATATCCAGTATACCTGAAGGAATGTATTTTGCCAT
GCAAACAGTTGTCTCTATTGGTTACGGAGATATTGTCCCATCTTCGTTTG
CTGGTAAAATTACTACAGCCATGACGGCTATTGTAGGGGCGTTAACAATG
ACTGTTCCTCTCCTTTCGTTGGGCGGCAAATATTTCGCCACCTACACCAA
GACTTTTGATGTCAATTTGAGCGCCGACCTTATCAACACTCCAGGACCGA
ACGTTCAAAACGAAGAAGCGAAGAAGAGAGAACTTAACAAAACTACTAAT
GActtaaaagatatttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:746321..754162 + |
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