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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:693483..702266+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14212.1.p1 ID=MSTRG.14212.1.p1|Name=MSTRG.14212.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8784bp|location=Sequence derived from alignment at sc0000117_pilon:693483..702266+ (Clytia hemisphaerica_ch_hm2_pilon)
CCTGAAGAAGATTGTTTTGAGGGTCTGTCAAAACTAGTTCCTTGATCGGT
ACCGTGTATTTCAAAGTTTTAGCATCAATAGGGAGCAGTtcgtcaaaata
caaaatagaCCTCTTTGACCAACAACAACATTGCTTGCCGacctatcaaa
acaaaatccacaagcaagaaatttttttagaatattctagaaataagaaa
gaaagaatTACTTGTTCTAAAAAGGTGAAGCTTTAGGTAAGATATTTAta
ctatgattttttttttcttttcaagattagtttatttttttctgggtgtg
tctttttaacattttttagacGTTCCACCATGAACTTTGTTTTGACCAAC
TTTTCCAGGACCGGGGGTCTGAGCTTGGATTTCCCAAGGGGTctgttctt
tttcatttttcccaaGGGGATAAATCAAGTTTCCAGGCCCTTTTAGGGGA
TTGTGAAGATTTCCATCATCCAGGGATTCTTTTCAAGAAATTACCTAGCT
TTGCTATTTGACCCAAACATCTCAACATGTCTGGATTAAACAAAGTATCC
GATTCACCCCGGGTATCCGATTCACCCCGTCTTACGGTAGTTATTCGCAG
TTAGGGATTAGGGATTCGCAATTTTGGATTAGGGATTCaaactttgattg
aattttttgaaagacCTAAATTAACTTACGACTTTCAAAGAAAAGGAATA
TGGTAgacagtcgggtgtttaagataaaaactgcaattattgctcttttc
ggaaattattgccgaaaacggcaatttttttaacgatgaaatgctgaatc
agcaaaatgtgttgtccttttaagggcaaagatgtcagaggtgtttgaaa
acagtaaaattgcatcgagaaaaaggtttttcggatttttaaaagtaatt
ttttcaatttttcgttgctcaataacatgaaaagttctaaaataatatgt
taaaagatcctgcatcgatgccgaaacacagccagaaagagataacaaaa
cccccgttgtaaatttgtttacatatgactcgattttgctatctgcattt
ccaacaaaaaccagttgaaaacaaaactaaacgaggcacagtgggcctac
ttatcgcgagggtgtcaaataccacgtgttcaataataaaatcaactttt
atttccaaTAACGGCAATACTTGCCGAATACGGCAACTTTCAttcattta
cttttttatttttctgctgattcagcatttcattgttaaaaaaaattgcc
gttttcggcaatactTTCCGAAAAGAgaaataattgcagtttttatctta
aacacccgactggtaGATAACATTCCCAAGTgacactgcgatggagagcg
accatttttggtggaaatgagaccttataatattcctaactgattccaat
atttaaaagttcaacagaagtctgctctcctccacacaaGTCCGAGTTGT
TCACTTGGTGGCAATATTGTGAATCCCTAATTCGTCAAacagtctgcgat
ttttacagctcggacactgcgatggagagcaaccatttttggtggaaatg
agaccttataatattcctaaccgtattccaatatttaaaagttcaacaga
agtctgctctcctccacacaagtccgagttgttcactcggtggtGATATC
GCGAATCCCTAATTTgtcagtctgcgatttttacagctcgaacactgcga
tggagagcaactatttttggtggaaatgagaccttataatattcctaacc
gtattccaatatttaaaagttcaacagaagtctgctctcctccacacaag
tccgagttgttcactcggttGCGATATTGTGAATCCCTCATTTgtcagtc
tgcgatttttacagctcggACACTGCTCGCGACcatttttggttgaaatg
agaccttataatattcctaaccgtattccaatatttaaaagtttaacaga
agtctgctctcctccacacaagtcggagttgttcactcggtggcgATATC
GCGAATCCCTAATTTgtcagtctgcgatttttacagctctaacactgcga
tggagagagactatttttggtggaaatgaaaCTTGGGAATGTTATGTTAT
CTACCATATTCCTTTTCTTTGAAAGTCGTAAGTTAATTAGgtctttcaaa
aaattcaatcaaagtttGAATCCCTAATCCAAAATTGCGAATCCCTAATC
CCTAACTGCGAATACCTAACCaagttatttttaataaaatgttgAGTTAT
GCCAAGGCCATAATGTAGGTTGTGTAGAAATTAGGAGATACAGCCCTCTG
GAAAGTGAAATTGATGAAGGTCTGGAAGCGCATAAGTGTGTCGCTCTGAT
TACTTGTGTTGTTTTGCATGGATAAGATTCCACTCCACACTTCCACTTTT
Cattgtaccgtaagttggtctaatatcgacatcccttgtctaattccaac
acccttctttaaaggaataatatgaaagcttgaaacaCTGATTAAAAGGA
TTATTCCTTTTTGACCACTaggcaaagaaaaacagtttcaacttttctat
aaaattccagctgataaaaagggtgtcagaattagagaaggggtgtcaac
attagaccaaagAACTAGACTAGATGAGAAATGAGCTTCAGAAAGTCAGA
TCAGACAGTTTTTTAAGTAAACACCATTATATActgggtgtcccagaaaa
ataTTCCCCTCtttgaaatgaattattttgaaaactattgggaatttttg
aaaaaatatttttgcatcgtaaagaggaaaggttaacttaaattttgatg
tatcgtATATAAAATTCTgatcaatattcaaaaagtaataaaaaaatttt
ttttttgtgatttcaaaatatcgtcaaaaaacgtcaaaagaGAGGGTATC
AAATTTAAGCAATTAATCCTAAAATGACACACTTGACTTCATTAATAGTT
ATAATGGTTTGAAAAACAGGTGAAATCTTATACAAACGACAGTAATCTGG
CATCATTATTGTTTTCCAGCCTTTCATCAAATCTCACTTTCCCGGGGGTT
CCATCTCCTAATTTCCACACGAACCACAGTATacttatataccgggtgca
ccagaaaaaagtatacaggtttgtcgagatattgtgagcttcaggatttg
gattttttgttcattctttttttatcttatagaggatgctctaacttgaa
ttttgagctatcatatattaagtttgaaaaagtagttcgaaagttatttc
caaaaaactgactttttttccaggtcgaaatttaaaaaaatcattaaaaa
cagcaatcacgctaaaagtaagacaaaatgacaaaaacacaatttcattg
tttttggacctaccccggtggggtggaggtcctataaattaacctgtgtt
agtCCATCCGTCCgtttgttcgtctgttaccaacttttctcaggattgaa
tcatcggaatcttttgatttttggtacaaaggtgcaaaatggtagtggcc
aaaatgtgacgcaGCCCGatttttttaggcaaatttgggccaaaaaacgg
ctaaaaaacgggttttttggactttgtgaaaaattggatcattcattttt
tctgttttttttgcatgaaagtaggctaacatcattggtaaaagatggct
caagcagatttttgcaaaaaaattttgttggctcaaaaaacccatgttta
tctataagaatcactattaataagtatacatcaatgttcttagtcaaatt
actcaatttttttatgagatacacgctttttttgctcacaagggcttact
tttgaagaatatgtgtgtttagacatgaaattttggttgcttggtgtgtt
tttatagaaaaactggcgaaattcaatatttttttataagcacattatca
attacttaggtattagcttttctcgagattggttctttcattctttatga
ttattttgcacaaagatgcataactataaaccctcgaatgtgacggagcc
caattttcgaaagaaaatgtttttgggcaaatttgggccaaaaaacggct
aaaaaacgggttttttggactttgtgaaaaattggatcattaattttgtc
agattttttgcatgaaaataggtaaaagatggctcaagcagatttttgca
aaaaaaattttattggctcaaaaaacgcatgtttatctataagaataact
tttaataaacatacatctcaatgttcttagtcaaattactcaattctttg
atgagatcgatgttttttgctcacgaagttttgaatatgaaagaatattc
cacgatcatgaaattttagtttctCACGTAACATCGAAACCTGCTGAAAC
CTGTCTtgaagatttccaaaaaaaatttcagcttttccaaaaatattatc
cacgtgaaaatagcttgttttaccatattcttaagaAGAAGGTAAGTGtt
aagagaaaagtttgctggctgtttttaatgattttttgaaatttcgacat
ggacaaaaagtcagttttttggaaataactttcaaactacattttcaaat
ttactgcatgatagctcaaaattcaagttaaaaatAGCAAAGGATTCTTT
TGACCAAACATTGAAGAtttattctttccaaaaacctGCCCTGAACATGC
GCAGTATCCAGGAAgaacattcaggactttttcatGTTCACAAGTGACCT
GAAAAAATTTGGGCTATAccacagggctgcaaataaatatttttagtcaa
acggacatcatgtccgacagaaatgaaatcctgtcggtcaaactcaaaat
cctgtcggtcattcagtgtatataatttttaaaattacggagaaagcgag
taggaaaaataacctttgaacagtttgttactgtatataacagagaaatt
gaaccgataaaagttaacttagaaacactcttgaaagttatgaagtaagc
aagttgatgaaaatggtcttaaaaaaactcttgaaagttacaaagaaagc
gagtcgataaaagtttaactttgaaacacccttgaaagttacgaagaaag
caaattgataaaagtgatcttagaaacactcttgaaagttacgaagaaag
cgagttgataaaagttaactttgaaacactcttgaaagttacaaagaaag
caaattgataaaagtgatcttagaaacaaaagaaggttacgaagaaagca
agttgacaaaagtgATTTAGAAACACCCTCGaaagagttacaaagaaagc
gggttgataaaagtgatcttagaaacaaagaaagtaacgaagaaagcaaa
ttgataaaagttaacttagaaacacgctgaaagctacaaaggaagaGAGT
ATTTTCtaataggctaagtaagagacgggtataagagatttattttaaac
tctcaagttaatgatttattccttttttcattcggacatcatgaccgaca
caaaagattttcagtcagtcaaatagctttttcagtcggacattgaccga
tgaccgacgcttatttgcagccctgatACCATGGGTCCTATTTCCACAGG
ATCAGTAtcattcaaaatttccagggagCTTGTATGATTTTGCTTTTGGA
ATAGACTattttaatacccttaatgtcattaaattttgtgtgttttataa
ttttgcaattttttaggtcaaatttcacgaaatttaatacaaaattttta
aacacaaaaatttttcatttttttggtatgtttacacCCAATAGCAATAC
ATTGTGTTTCAAGCGAAATTAGTtgagaattttctttctttattcccact
ttttgaaaatgcccaattaagtaaatcatgaaatttaatacacgcaaaAA
CTTCCAGAAACTGGCAATCGTGAAATTTAATTGATTATAACACGCAGAAT
TTAATACCATAAGGTAGTCCATTTGCTGCTCTTTACTCTGGATCCCAAAT
AGTTggggggggACTACTAATTGCTAGGGTTTGTAAACTGTACCTCCAAA
AATCCCAAAATAAAGTAACTGGCTCTTTTTAAAGCAATTCAGCTTATaat
agcaaaaaatattttcaaaaatatataaatgagAGTCCTTAATGAAAACA
GGGAGTCGAAAATttgttttgcaaaaatcagtattGGGAGAGATCCTATT
TATTtgcataattttcattaattgaATTATAGGCCTCTTAAATTCTGTTT
TTGACTAGTTAAGTTCTTATAGATATCAACACTTTCCTTTATCAAGGGCA
GGTTTCTAGCCTTTCACATTAAATGCCTGCTTCACTGTCAATCTCATGtt
ggtgaaaaaaataaaaaggctTTGAAGATTCTTAAAGTTATTATAATGAG
AAAAATaacatacagtatgtggcccccaaagcggcgatcaaatttgaaat
ttctctcaaatctagaggaaaagagattttacaaaaatttttgctgcatg
aaaacctttaacatctctactttatttcctggaagttctttttcaaaatt
tcctatttcaacaatatttttcaatcgcttaaagataggtagcttttttc
taatggcccccaaaacggaggtttgaaattttagcgatttctcgagatat
ctttaagatatgaatacaaaattatgaccatagttttgaaatatgattta
gagggttttgggcataaatttgtttgataaaatttttacagtatacccct
ggttgtcaaaatgcaggtttgaggcctccaaaacggaggtgtagttaaaa
tcaaattattaagcccagtggtaataggggggaaaactatgaacatattt
gtgttttcccttaaatttacgacccaatggatgtaaaatttatgattttt
atgaaatatttcaagattttcgatattgcaaagtccaaactgaaaattta
gaaattttcaaaatgacaattttgatttaacaacgtcttaatcaagtttt
tgaaaaaaaatctcttttgaaaatagttccattcatgtatggaataagct
gtgaaaattttagaaaaaaagcttactgaaactgaaaatattaagcttta
attaaagatatttttctccaatattttggaaaaaagttacagaatttgcc
gtttttgctgattcagcgaaaaattttatatataatgtttttttttgtta
taaactattaactcaaggtgataggaaaagaattccaagattttttgctt
tttctcatatttagaaatttcggttttgtcaatgctgattctagggttcc
aaaatactggttgaccttcaagatgctatatcatttacccagcctctaaa
gtcacagatgtatttgcattttctgaacggcattaggcgtagaaagtttc
ctataccccgttttcataacttattttcaatatccaaggagctagagtga
gttatatgcaatttttatctaattttggtgttaaaatatttcctttagac
gcaaatatgttattttgaatttgtctcaaaccagcaaaaacatgctcatt
tttaagtataaccatcattctttcaaaataaacaaaaattgtttaattct
gataaatctacaagtcagaatcttcattttaatgaaaacctccgttttgg
gggccgtctccgttttgggggtcaTAAGTGTCAAGAATTAATAACCAATT
CCAAAATTGAAACTAATTCTCATAATGTTCTTTagataaattgtaaagat
ggaGCAAGCAGTTCAACAACAAATTGTGCAAGCTGCCAAAGTGGTGGAAA
GTATGGTAGATAAAGAAATGGATCGCCTTGATAACCTTGGTGGCGACGAT
TTGCAGCGTATAAGACAAGAACGtttgaatgaaatgaaaaaaatggtaGA
ACGAAAGGAACAATGGAAGCAGATTGGCCACGGCAAATATGAAGAACTGA
AAGATGAGAAAGAGTTCTTTGAAGAACAGaaaaaaaGTGAGCGATTTGTT
TGCCATTTCTACCGTGAAAGCACGTTCAGGTGCAAGATTATAGACAAACA
TTTAGATATTGTTGCTAGAAAGCATATTGAAACCCGATTTGTTAAAATTG
ATGCTGAGAGATCTATGTGGCTTGCTCAAAGATTGAAAGTCAAAGTTCTT
CCAACTTTGGCATGTATTAAAGATAGCAAGACCAAAGATTTTATTGTTGG
TTTTGATGATTTGGGTGGTGTTGACGATTTCCCGACAGAAATGTTGGAAT
GGAGATTGGGAATGGCTGATATGATAAATTACAATGGTGATAAGCCAGCA
TTGAAAAAGAAAGCTCAAACACGAGTGTTTGGTTTTGCAGGGAAATCCAA
GAATATAAGAGATGATGGGGAGTCTGATGATGACTCTGACTAAATGAACT
TTCTgcaaatagatcttatcggagtctttgatttttctaaaaaagcaatg
cattgtgggattgtttcgggagtattacaatagaaatctcttaggaattc
ctcgagagaaatctattgtaatactcccgaaacaatcccacaatgcattg
ctttcttagaaaaatcaaaaactccgataaggtctattgtaaCAAATATT
ATTTCAATGACATTGAAATTATGGTTGGATATTAAGGAAagttttttaat
tgattttatgttgaaaaattttaattcagtttatcaataagtttttattt
attctcttttttGTATGCTCAGTATAATGTAAATAGATAAGTACAAATAG
GAACGGATATGATCTATATATTGAATTATATACTGCAACTGATGCTGCTT
ATTTTATACAAAGATACATCttttaagattgaaa Coding sequence (CDS) from alignment at sc0000117_pilon:693483..702266+ >MSTRG.14212.1.p1 ID=MSTRG.14212.1.p1|Name=MSTRG.14212.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=645bp|location=Sequence derived from alignment at sc0000117_pilon:693483..702266+ (Clytia hemisphaerica_ch_hm2_pilon)
atggaGCAAGCAGTTCAACAACAAATTGTGCAAGCTGCCAAAGTGGTGGA
AAGTATGGTAGATAAAGAAATGGATCGCCTTGATAACCTTGGTGGCGACG
ATTTGCAGCGTATAAGACAAGAACGtttgaatgaaatgaaaaaaatggta
GAACGAAAGGAACAATGGAAGCAGATTGGCCACGGCAAATATGAAGAACT
GAAAGATGAGAAAGAGTTCTTTGAAGAACAGaaaaaaaGTGAGCGATTTG
TTTGCCATTTCTACCGTGAAAGCACGTTCAGGTGCAAGATTATAGACAAA
CATTTAGATATTGTTGCTAGAAAGCATATTGAAACCCGATTTGTTAAAAT
TGATGCTGAGAGATCTATGTGGCTTGCTCAAAGATTGAAAGTCAAAGTTC
TTCCAACTTTGGCATGTATTAAAGATAGCAAGACCAAAGATTTTATTGTT
GGTTTTGATGATTTGGGTGGTGTTGACGATTTCCCGACAGAAATGTTGGA
ATGGAGATTGGGAATGGCTGATATGATAAATTACAATGGTGATAAGCCAG
CATTGAAAAAGAAAGCTCAAACACGAGTGTTTGGTTTTGCAGGGAAATCC
AAGAATATAAGAGATGATGGGGAGTCTGATGATGACTCTGACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:693483..702266 + |
|
