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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:602706..607429- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14203.1.p1 ID=MSTRG.14203.1.p1|Name=MSTRG.14203.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4724bp|location=Sequence derived from alignment at sc0000117_pilon:602706..607429- (Clytia hemisphaerica_ch_hm2_pilon)
TTCTTAAACTTTGTTAGAGCTTGCTATGGTGTTGTTCGATTCATCATGGA
AAGTGGAGCCAAAGGTTGTGAAGTTGTAGTATCTGGAAAACTTAGAGGTC
AAAGAGCCAAGTCCATGAAATTTACAGATGGATTCATGATTCACAGTGGT
TTCCCAATTGAAGAATACATTGACGTAGCAATTCGTCATGTATACCTCAG
ACAAGGTAAGATTCTTAAAACTTGGGGTCTAACCACCACAAAAGCTTATC
TAAAATAGCATTGTTTTGTACAAGAAATCAGAAGTATCCTTTAAAGTTCT
TTGTTTAAATAACGTTTAGACATTGAGTACCTTATTGGTATTATATTTCG
CGGGTACTTAATTTTGCAATTTTTTAGGCCAAATTTCGCGAAATTTAATA
CCGTTAAAATTTTTCAAAAATACAAAATCGCAAAATTAAGTACACACAAA
ATTTTCAAAATAGGTCGAAAATCGAAAATACTTATTTGTTACACTTAGTT
ACTATTTTTGTCACTAGTTTTGTTACTATTTTCGCCCTACAATTAGAAAA
GTTGCGTTGTATGTATGCTCATAATCTCATATATCGTGCATTTTTAATGA
GCTCTTTTATGCATTGGTGAAATCTTATTGGCTCATTGAAGCTTTAAAAA
TTAGTTGAGACGAGATTCATTGTTTCTGACATCAGTGTAAGAAAATATTT
GGACTAAAGGCCTGTAAACTTGGCAATCCCTCATCAAATAATAGGATTTT
TCGATCAATGTTTTCTTTTAGGTGAACTCTATTGCTTGATACTTTCCTTC
AAAATTCTCCAGCAAATTTATGTCCACAAATTGAGTCTGAAATTGTGCGT
GCTTTTAAAGAACTTTTCATTTTCTGGCTTGAGAAAATATATTTTCAAAA
CAAAATTGAACGAATTACGAAATGGAACATAAACTTGTGTCGTGGACGAA
GTTTTATTTAATTTTCGTATATTAAAAGGCTAGAATCTTCAATACTGATA
ATTACTTTAGGCGTAGAAACTTTCGCGAGCAGAAACTTTCACGATTTTCG
CGAATTTTGGCCCTTTTCGCGAAAGTAAATGTCTTAAAAAATTCTAGGAA
GGGCCATTCGCGAAAGTTAATGCTCGCGAAAAATTCTTGACAAAATAGAA
AATCTGTTAAACTTCAAACTTTGAATAAAATGTAACTTTTATGGCACTTT
TTAGCCTGCTAAAATACTAATAAGTCAAAAGACAAATATTTCAAGCCAAT
CCAAGAAGTATTTGCCCCTCTAAGCCATTTTTTCATGTGAAAATTCTCAA
TTTTACGTCTTGATTCGCGAAAGTTTATGCTCGCAAAAAATATTTTTCCG
TTAAATTCGCGAAAGTAAATGTCGTGAATTTCGCGATTTTTCGTCCTCGC
GAAAGTTTCTGCTCGCGAAAGTTTGTACGCCTAAAGTAGAATGTTTAGAG
CAAACTTGAGTTCCACTAAAGTCTTATTTCATCGGGCGACCTTAGAATTT
CTTTTGATACATTTTATAAAAGAAATCAAAAGACTTTAACGACCAATTAC
CAACACATTCAACTCCTGTTTTTCTTTATACCTCCATGTTTGCACTCAGT
ACCCCCAAAGTACTAAGTGCATTTGACTACTTGCCAGGCTGGCACCACCC
AGCAACACCCCCTCTTCTGCCCTGTTTAGTGGTCTTGAGTGGCCAAAACT
CAAGGTAATCACTATTTGAAACCTGTTAATACCCTAGGCAGCCTTGGGGT
TGACACTAACCTTGGTAATTTTTCTCTATTTGATTTATAATAAACTCAAA
GCCTAACATATGATACAAAGCTACAAGACCCAACGTTTAAAGTCAAGTCT
GCCCAACATTATTTAGGTCTAAAACTCAAGAAATAAAAAAATATCACTTT
TGTATTGTTTGACGAAAGACTGGGAGAAAAGCTTGAGAAGACATTGTAGT
GATCAGGGGGGGTACCAAGTCGGTGTACTGGCCCATAGCTGGTGGGGTGG
TGTATTTTTTAGGTTAAATTGAGTTAGTACAGTGTACTAAAAGGGTAGTC
CTCTGAGAAAAATACATTGAAAAAGTTAGTACACTGTACTAAAAAGGGTG
GTGTTCTGAATTGATATACAGTGAGAAGTTAGTACATTGTACTAATTTCA
GTGGTAAAAACACTCAAACCCAGAGAATTCCCATGTATATTTGCCCTAAT
TTTCCAGGTCCAAGCTGGTCTGAGACTTTCAAGTCAAGGCTGGTTAACCT
TTTCAGCCCGGCGGACGAGTATAGTCGTCGAGCATACGTTCCGGCAGACG
AGTATAGTCGTTTTTTTGACATAGTGATCTTCTAAGCTATATTTCTCCCA
TTGGCTTCTTTGCAAGCCGTAGAAGTAAAGAGAAACGGAAAGTAGAGGTT
CTAAGCTTTCTTTTGATATATGGTGATGTAATGTTTTGATCACGTGGTGA
GGCAGCAGATTTCGGAGAAAAGGTAGAGAAAAAACACTGAATCAAGATGG
CGACCAAGAAATGGGTTTTTCAAACTTACTGCTAAAGTTCTTGGATTTTT
GACTGGTTTAGGCCACTNTTGTTTACATTTTCTTTAAAGCCCTATCTACA
TTATGGCAACAAAAGAATTCGAATGTACGTAAACGTTCAAATCGAAGCTT
TAGAGTCTCTTATTTTTCTTTTTCAAAAAAGAAAAACTGCTTCAGTTTAC
CAGAAATCAAGTCATAGAAAGGAAAATAACTCAAAGTTGGTTTTGAGTGT
TTTGACGTGCTAATTTCAGCTAGATGTTTGTACTACAAGGATTCAAACAT
TTTAATACTCAAATCTTTCCTTTTATATAATTTGGTGCTTTTCTTAACAA
AATGCTTCAAAACTTTGAATATGGTGGCAATTAAACTTATCTGGCCAAGA
AGAAATTAGATCAGTGCCGCTGTAAGGGGTGGTTTCTAAACTTATCTGAT
AAAAAAAACAGCTAGTAAAGTGTGCTAAAAGGGTGGTATCAAAAATCCGG
TCATGGAGCAAAGTCAGTACAGTGTACTTAAAGGGTTGTGTCAAAGCCTC
GGCCGTGGAAGAAAGTTAGTACAATATACTAAAAGGGTGGTATAAAAATC
CGGTCATTGAGAAAAGTCAGTACAATGTACTAAAAGGGTGGTGTCAAAGC
CCCAGCCGTGGAAAAAAGTTAGTACAGTGTACTAAAAGGGTGGTGTCAAA
GCCCCGACCAAAAATCAAGTTAGTACCCTAAGGTCCAGTACACTGACTTG
GTACCCCCCCCCCCCCTGTAGTGATGCACAACTTAATAAAAACAAAAAAC
TGGCAATTTATCTGCACATAATTTTTAAACAGGCAATCTTTGACATGGGA
TTTCAGATTCAAGCTGATTTGGTAAGGGTCAGGGCAAACCAGTCCAACAT
GATTTTCCAATGTTGGATAAAATGTTTGATGGAAAAACTTGTGTTGGATG
AAGCGAAAATCAAGGCCGGGGCAAACCAATCCAACATTTCATCTGACATG
ACTTGGAAAAAAATGAAAATTCAAAAAAATAAAGAAAAAAGTACCACCAA
ACCAATCCAACACGAAAAATTACACAATTCAATGAGAGAGCTTCTTTGAT
CTCGCTGCAAATGTTGGATGAAATGTTTGATGGCGATCAAACTTCATCCA
ACACCTTCCAACACGATTTTTTCTTCTTTTTTTGAATTTTCATCTTTTTC
CAAAAATTTGAATTGACGCAAACCGGTCCAACATTTCATCCAACATATCA
TCCTACATTGAAAAAGGCTTATTGATAAGGGTAAGACCAGCCTTTTTTAC
ACTTGGTACCCTAAAGGTACCATTTGATCGACCTGAAATTTATAGCACAC
CACCCCTCGTAGCAGTTAGGTACCCTAGAAGTACCATTTGATTAAGTTAA
ATTTCATATTACACTACCCTTTACAGCAGTTAGTACCACAACGTACTAAC
TGCAAATTCCAAAAATCAAATATGACCCACCACGGTACTAACCGTCATGA
TGTCTGGTACCAACTGCATGACCCCTCCCCCCTGAGTACTAACGCTAAAT
CTACAAAAAAATAGAGAAGAGAAACATTTCTACTGTTGGGATCGTGACAA
TTATTTAAACGAAAAAATATCTTTTGAATACTATCCTCCAGAGCAGTCTA
GCGAATTGTTTATTTTGCTTTCTTCAGGTGTATTGGGAATTAAAGTAAAG
ATTATGTTACCTTGGGATCCAACTGGCAAGACTGGACCCAAAAAGCCTTT
ACCAGATCACGTCTCCATTGTTGAGCCCAAAGAAGAAATCTTACCTTCTG
GTCCAACATCTGAACAAGTTGGTGGTAAACCAGATGTTGCTGCAGCTGCT
GCCCCACCACAGACTCAACAGCAACAACAACAACCAACTCAACCACCTCA
ACAACCAGCACCTGTGTGAGTTTTCTTAGACTTCAGATTAAACAATAGGG
TAATAGTGTACCTAATTAACTTTGGTTATATGTAGGAAAATTTTGGGACC
CTCTAACGAGAGTGAACTAATTGGGTAATCAAAGTTAAAAAGGTTGCAAA
TAATGAAATTTTCAAGCGTTTGGGAGAAAAGGGAATCTATTGATACATGT
TTTGACAAGTGATATTTTTCTCTTTCAGGGCTTAGATATCGCCTGACCAA
TGGAAGTCGTCTACCATCTCATACTTTCAATGAAAAATATTTGAAAGAAC
AAAGTTCACTTGTTTCAATTCCTG Coding sequence (CDS) from alignment at sc0000117_pilon:602706..607429- >MSTRG.14203.1.p1 ID=MSTRG.14203.1.p1|Name=MSTRG.14203.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1215bp|location=Sequence derived from alignment at sc0000117_pilon:602706..607429- (Clytia hemisphaerica_ch_hm2_pilon)
GGCTTAGGTGTATTGGGAATTAAAGTAAAGATTATGTTACCTTGGGATCC
AACTGGCAAGACTGGACCCAAAAAGCCTTTACCAGATCACGTCTCCATTG
TTGAGCCCAAAGAAGAAATCTTACCTTCTGGTCCAACATCTGAACAAGTT
GGTGGTAAACCAGATGTTGCTGCAGCTGCTGCCCCACCACAGACTCAACA
GCAACAACAACAACCAACTCAACCACCTCAACAACCAGCACCTGTATGGA
AAGTGGAGCCAAAGGTTGTGAAGTTGTAGTATCTGGAAAACTTAGAGGTC
AAAGAGCCAAGTCCATGAAATTTACAGATGGATTCATGATTCACAGTGGT
TTCCCAATTGAAGAATACATTGACGTAGCAATTCGTCATGTATACCTCAG
ACAAGGGCTTAGGTGTATTGGGAATTAAAGTAAAGATTATGTTACCTTGG
GATCCAACTGGCAAGACTGGACCCAAAAAGCCTTTACCAGATCACGTCTC
CATTGTTGAGCCCAAAGAAGAAATCTTACCTTCTGGTCCAACATCTGAAC
AAGTTGGTGGTAAACCAGATGTTGCTGCAGCTGCTGCCCCACCACAGACT
CAACAGCAACAACAACAACCAACTCAACCACCTCAACAACCAGCACCTGT
ATGGAAAGTGGAGCCAAAGGTTGTGAAGTTGTAGTATCTGGAAAACTTAG
AGGTCAAAGAGCCAAGTCCATGAAATTTACAGATGGATTCATGATTCACA
GTGGTTTCCCAATTGAAGAATACATTGACGTAGCAATTCGTCATGTATAC
CTCAGACAAGGGCTTAGGTGTATTGGGAATTAAAGTAAAGATTATGTTAC
CTTGGGATCCAACTGGCAAGACTGGACCCAAAAAGCCTTTACCAGATCAC
GTCTCCATTGTTGAGCCCAAAGAAGAAATCTTACCTTCTGGTCCAACATC
TGAACAAGTTGGTGGTAAACCAGATGTTGCTGCAGCTGCTGCCCCACCAC
AGACTCAACAGCAACAACAACAACCAACTCAACCACCTCAACAACCAGCA
CCTGTATGGAAAGTGGAGCCAAAGGTTGTGAAGTTGTAGTATCTGGAAAA
CTTAGAGGTCAAAGAGCCAAGTCCATGAAATTTACAGATGGATTCATGAT
TCACAGTGGTTTCCCAATTGAAGAATACATTGACGTAGCAATTCGTCATG
TATACCTCAGACAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:602706..607429 - |
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