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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000116_pilon:573814..576566+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14116.1.p1 ID=MSTRG.14116.1.p1|Name=MSTRG.14116.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2753bp|location=Sequence derived from alignment at sc0000116_pilon:573814..576566+ (Clytia hemisphaerica_ch_hm2_pilon)
CACATTGCACGATAGAGATTACCATCACGTTtcattctcttttattttag
atatttacataagaattaagaataaaaagaaaacatcattaaatattttg
atacattttgtGGGATGCTCTCATCAGAATCTGCAAGTCTCAATGATAAC
AACAATGGTGGTGGAACTTCTCTTCAAAGAACGGCCAGTGAGCCAGATAT
GACCAATGCTGATAACATAATACGCTCAAAAAGCAATGCATCACAATGCA
GTAAAGTTAAGAAAAAGCTTTCAACACATATTCATCATACTGGTGAAGAT
TTATTGCCGGTGACAAGGTCGCGTACTGTGTCTGGATTCTCAATTGGTAA
TGGTGATATTGGACGTGTTCGATCTATTTCAGGTTATGGGTCCGCCCTTG
GTGCCACCCCTATAGAGGGAGTGTCTTTGGAAGAATTAAGTGAGGAATCT
TTAGATTTTTCTAGACAAGCTTTCGATAAATTACGGAAAGATTTGGAACG
CGCACAACAGGAGCTGAGAACCAGGGATTCGCAATGTCAAGAGCTGTCTA
AAGTGCGAGATACAGTTGATCAAGAAATTGAGGAGCTGACTGCTAGTCTA
TTTGAGGAAGCAAATAAAATGGTCATTGAAGCTAATGTGGCACGCATGTC
TTGGgaaaagaaattccacgaagcaGAATTACAGTTAGATGGTCTACAAG
CTGAATGTCATGCTTTAAAAGCACTCGTTATCACCTCAACACCCTCCAAC
CCTGGTAAACAAAGGTTCCATAAAAGAGCACCAAGTGTTGGTCAAATATG
CAACGGATGTGATACCTTTCATTATATAACAGATCTGGACGAGCAAGATT
GGTCTAGTGTTGATcctataaataaaaaagaagttgatccacttgttttt
caaagtttttgctCATGGATGGAAGATAATTGCCCGTTAAAGGATCACCA
ATTCTTGAGTATTGTGCACCGTGATGATGTAGTACCTTGCTTAAGGTTCC
CTAATGAAGATTTATCAAAAGCCATTTATAAGGCTGCTCAAAGTGATACG
CTAGCTATTGAACCCATCAAATCTAAACCTAAAAAATGTGCTTTGACGTC
TATCAATGGACCGTGTCCGTACCGGGTACGTACTGGAGATTCAGATAATT
GGTATCCAATTTCTGGTTCGTGTCGTGCTCGGATTGTAACAGtgattgac
tttttgactttcttgAGGTATATCAGGCAAGGTATCATTAAGAAAGATGT
CAATGTTTTATACTGGGAAATGGTCAAGAAACGAGCAGATATTAATTTAG
CACGACTAGGATTGGAAAATCCTAAATAATTAGTGCTAGATTTATGTTTT
AGCCACATACTGCATAACTATATCTTCATACTTCTAAGCAAACCTTATAC
CTTAAgctaagggaagaaattttcgcagaatttaattttcacagaattta
atttcgcggtttacAGTTCAAAATTCGGAATTAATGAAAAGGCAGCATAA
GAAAATGTCACTTTCAATTTCTTCCATGGAGTCGGTTTCATTTTCAGAAA
TGgataaaattgagaaaaagaactttttttaatcaaaccaatAATTTTGA
CTTAGCCTCaactgttttttttagtttttcttgatATTCAGACTAAAATG
TTAGCTTATTTACTAATAATTAAGGGGAataaaagatgtattttgtgtCA
GCTTACATCGTTTTCTATATGTTTTTTGTGTTCTTAAAATAAGTGTACAG
AAGCGAATCTCAACCCGCCGGCGCGTTCTAATGAGTatttagaatatctt
tagaatatttatgatttgtttactttattatatttgtttgtttacatttt
gacgatttgaaagctgatttacaatacactcttttttttataagcatacg
ggaaaatcgggtcgagggtcaatatgcttagcaaaatctcattttcagcc
tttAATTTACATGCTTATTTTTATGCTTATTTTTATGCTTCGGGTTCAAG
AAAATGTTGTATTTTTAAGTCGAACATTGAACATCGATTTGGCTCAAAGA
ACgaaagttttctttgaaattagGCGCCGCAGGTGAAAGAAAATCTTTGG
TCAAGGAAagctcaaacagctttaaaagcaaccctaaaaaggtcagcgtt
ttacatttcagcttggaggtatgcttagcattatgcttattttttgcCGC
TAATTTGAGCCtgagtatgcttataaacgtatgcttataaaaaaatacag
tgTGTACagtatgatttttatgatttgtcctttattgttatttttatttt
tatttttaataattcatttttattttaatgttctatacatagattccaat
tcatttttaCATAGTATATAGTAAGTAAAATGTATATTTTCATATATCAG
AGAttcctaaatatttttagtttcaattttctATGCCTATAATAAAATTC
TTCCctagatatatattttttttacttcgaaattatattcaatatttttt
tttgcttatatcaaaGTTATTATAATAATTCCAAAGACTATTTTTGTGCA
TTTCTACTCCTACagttatatttctttttcattgattttgttaaaaattg
agaCTGCCAGGTGGACTTTTAGGGGTCTGGCAAGGAAAATTTCAGTTAAA
CTTGTTTTATTAAAGTCATCGAGTACCttgtaaactttttgaaacGTAAT
TTATTTTAGTAGTTTCGATAATTCTAAAGATTGATCCTCTCCATAGTTTT
CAG Coding sequence (CDS) from alignment at sc0000116_pilon:573814..576566+ >MSTRG.14116.1.p1 ID=MSTRG.14116.1.p1|Name=MSTRG.14116.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1215bp|location=Sequence derived from alignment at sc0000116_pilon:573814..576566+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTCTCATCAGAATCTGCAAGTCTCAATGATAACAACAATGGTGGTGG
AACTTCTCTTCAAAGAACGGCCAGTGAGCCAGATATGACCAATGCTGATA
ACATAATACGCTCAAAAAGCAATGCATCACAATGCAGTAAAGTTAAGAAA
AAGCTTTCAACACATATTCATCATACTGGTGAAGATTTATTGCCGGTGAC
AAGGTCGCGTACTGTGTCTGGATTCTCAATTGGTAATGGTGATATTGGAC
GTGTTCGATCTATTTCAGGTTATGGGTCCGCCCTTGGTGCCACCCCTATA
GAGGGAGTGTCTTTGGAAGAATTAAGTGAGGAATCTTTAGATTTTTCTAG
ACAAGCTTTCGATAAATTACGGAAAGATTTGGAACGCGCACAACAGGAGC
TGAGAACCAGGGATTCGCAATGTCAAGAGCTGTCTAAAGTGCGAGATACA
GTTGATCAAGAAATTGAGGAGCTGACTGCTAGTCTATTTGAGGAAGCAAA
TAAAATGGTCATTGAAGCTAATGTGGCACGCATGTCTTGGgaaaagaaat
tccacgaagcaGAATTACAGTTAGATGGTCTACAAGCTGAATGTCATGCT
TTAAAAGCACTCGTTATCACCTCAACACCCTCCAACCCTGGTAAACAAAG
GTTCCATAAAAGAGCACCAAGTGTTGGTCAAATATGCAACGGATGTGATA
CCTTTCATTATATAACAGATCTGGACGAGCAAGATTGGTCTAGTGTTGAT
cctataaataaaaaagaagttgatccacttgtttttcaaagtttttgctC
ATGGATGGAAGATAATTGCCCGTTAAAGGATCACCAATTCTTGAGTATTG
TGCACCGTGATGATGTAGTACCTTGCTTAAGGTTCCCTAATGAAGATTTA
TCAAAAGCCATTTATAAGGCTGCTCAAAGTGATACGCTAGCTATTGAACC
CATCAAATCTAAACCTAAAAAATGTGCTTTGACGTCTATCAATGGACCGT
GTCCGTACCGGGTACGTACTGGAGATTCAGATAATTGGTATCCAATTTCT
GGTTCGTGTCGTGCTCGGATTGTAACAGtgattgactttttgactttctt
gAGGTATATCAGGCAAGGTATCATTAAGAAAGATGTCAATGTTTTATACT
GGGAAATGGTCAAGAAACGAGCAGATATTAATTTAGCACGACTAGGATTG
GAAAATCCTAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000116_pilon | genome | sc0000116_pilon:573814..576566 + |
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