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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000116_pilon:441444..445052+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14108.1.p1 ID=MSTRG.14108.1.p1|Name=MSTRG.14108.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3609bp|location=Sequence derived from alignment at sc0000116_pilon:441444..445052+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGTATCATGTTCCAGAATATATTTGAGAGCAAAGAGTTAAAGGCTGGTC
CCTCCAAACTTTCTCTCGAACAACAGTACCTTGAATTTCcttaattttct
aaattattgTAATATTCAGTTTTGAAAAGAAGCTGGTTTATTTTCGCAAA
GGGgtgttattttgtgtttttcgtAATGTTCTTCGGAAGAAAATTTGAGA
TATATCTTAATTGAGTACACTCGCTTGATATCAGTTTGTCAATTCTGAAA
GCTGATTGGacctttttaaattttcgtcGTCTCagtgattggttgattga
tcgAGAAGGTGAGAAAATTCAGATATCTTTAATATAAATTTATTTCCTAA
AGCTAGAGCCCTCATTCAGTTTTCTAACCTATCCCAGGCATGGAAATGTG
AAGCCAATActtagaccttatcggagtttttaatttttctaaaacagcgc
tgcattgtgggattgtttcgggggtattacaatagaattccatCGAGGGA
TTCCTGAGAGATTTCTATGTACCCCCGAAACAattccacaatgcatcgct
tttttagaaaaatcaaaaactccgataagatctattattttttatctaga
acGCACCTAGAACGCggcaatcatgacgacgaatTATATCTagtggtttc
tttgtttttgaggaatgaattcttttaaatctagcgatagattttacttt
cagtcCAGCGTTTgcgtaaaaaccacgcgcgggtgttctggatgggaaat
aagtggcttcatttcccatccagagactctcgagtctagcccttctggct
tggaagtcaatgttttaaaaactttatatGCACTTATATGATTTTATAGG
CTGTGCGTATCACCTCCGGATATGTTTTTACATAGGAGATGCGTAACATG
TATAAAATTCCCATATAAAGAGTACGTTGTAAGCCCAGTTTAAATAATGG
AATCTAATCTGGActtgaaataagattaaaattctCTGCTCAGTCAATGG
GTATTCAATGCCTGAATAgctttttgagattgaaatatttaatatagaag
tcataaaatttgacataatttatgaaaatttgactTAACCTAAACATTTA
TCCGCCTTTTTGGAACACGCTGTATACAAGAAAGTTTTGTTTCTTATAGA
TCCTCATAGAACAAGCAAGAACATTTTTCACCAAAGATGACTTCAACAAC
AGCTTCACAAATGATGAAAACTGTCTCCATTACCATCGCATTGACATGTC
TAATACTATCAACAGACATTAATGCAGCGTCCATCAACAGGAACAAAATC
ATCCAACATGAGCAATGTTTATCAGTGTGTAAAACCAATTTTCTAAACTG
TGGAACGAACCttcaagaacaatttgaggtttgttattcattttattatt
ttcttttctttgcttacttattttctaaagaattttccatcgaaatttct
tcCTATAAGGTTATTTACTTATACAGGCAGGGataacttcaaattagcct
atcataggctgattagcctatcataggctatttagcctaTTTCATACAGG
CTAATTAGCccataatgaagaaaaattagatttttgagccaaatactAAT
AGTCGCAtTCTATAAATCCTCAGATTAATCTCTAATCACTCAATTAATGT
ATATTCCAAATATCATCCCTTAATCAGCTCCAGAATAGGAGATATTCAAT
TTTTTCTGACTGCGCATGCGCCGAGCATGCGCAGTATAAAAACTTCGACA
TTTTTCGCGGAAAAATTTGTTAAATTTGTTTTTTTTTTTTTTTGCACACG
GTACAAGATCAGAAAATTAGCCTATTATCAGTTATTTAGCCTATCAGCTA
GTTTTTTTTAAATACATCTTTTCTGGGAGCTGAACACAAAAGATTTTTAA
GTGGAGAATGTTCTTTGAAACATATAAGATTTGTTTTTAGTGAAAAAAAG
ATGCGACTATTagtatttggctcaaaaatctaatttttcttcattatggG
CTAATTAGCCTGTATGAAAtaggctaaatagcctatgataggctaatcag
ctGATATTCCgagatgataggctaatttgaagctATCCCTGCCTGTTATA
TTACTACTTTATGGGAGGAAATTTGGGCAGAAAActtttttctcagattt
ttcGGATGTTGctgaaatccgcaaaattaagtttccgccaaaattaatct
tttttttatccACCTTATTATCCAATCGCCGCAAAATCTGAATTATTATg
ttcaatctcaaaatgttttttattcaggccctgaaaacaagttttttttc
tcatattCAATATCGTTTTTGGGACAAAATAATCTTCATCCGCCAACTTA
CTTATGACATCTCCAAAGGACCTAAATTTGTCgtcaattatgacgtcatt
acgTAGTTTTTccctaatttctcaaaaatgacaaaacattttctttcatt
gATTATGTTCTTACATTGATTACGATCAATGGCTTGGTGGCAggggggca
gggggccaggccccccccagcggagcccttttgagaaggggcgcccaaaa
ataagggacgttaagaaggatttttcaggcgcccatatcgaaagattgat
aaatgaaaaaacaaaaatggcgcccctcatcacctcaaaaactcaacatt
ttctggctcgcttcgctcgcacactttcttttttgtgttcataatgagcg
tatagagaggggcgccaaaaacaaaaagtctttaaaaaggccgccatatt
tgccttggccaccccagagaaattttcccaccacgccactgattACGATT
ATGTCTGGATCCTGAAACCTTGAGGAAAAAATCCATAAAGGAATCCCTGA
GATTAGGTGCCATTGAACTCAAATTTGGGATTTGTGCATCTAAAAAATAT
ACACGCCCCAACTCATACTTGAGATGGTAGGATGAGGCAGTAACACAAGT
CTTCAGTTTTAAAGAAGAGTGGACTCCACTCTGGGTATTAGTggctctct
gcttgatgctcagcagcTAAAGAGACAAATTCGAGAGGTTAGTGGAGAAA
TCTTGGGAAAGGGGTGGTTCACtttcctaccttcgggtagatagctagag
aaaagggagctTTAGGGccccccccTCGACTGTGGTTTCAAACTTTCTAA
CCTATTATGTAAAAATATTCATCTTCCAAACCCTTTTTCAAACCTTCTTT
CGGTGTATGCAAAAACGAAATACATTTTTGATGTCTGTGATTGAAAGGAT
TATGAAGAAACTTCTGTGTTTTAAACAAATTCTTCACATTTGTTTTTTCA
GTGTATGCAAAAACGAAATAAATGTTTCGATGTCTGTGATGGGAACGACG
ATGATGCGAAACGTGACGTCATAACAACAGGggaggaagaaagtgaaagt
gaattgGATTTACTTCGCACACTTTACCAAATCAAACGGCAGTTGATGGC
CCAAGAAGAATGGTAACGAGTACACGCATGTGCATATGACACAATAGACA
CAAAAGAccaataatttaaattttttaaatacgttattccatgatatgca
ccattgtaatgtcttccacggaccaaAACATCTtgttggttgaaagtgac
gtattgatt Coding sequence (CDS) from alignment at sc0000116_pilon:441444..445052+ >MSTRG.14108.1.p1 ID=MSTRG.14108.1.p1|Name=MSTRG.14108.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=714bp|location=Sequence derived from alignment at sc0000116_pilon:441444..445052+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTCAACAACAGCTTCACAAATGATGAAAACTGTCTCCATTACCAT
CGCATTGACATGTCTAATACTATCAACAGACATTAATGCAGCGTCCATCA
ACAGGAACAAAATCATCCAACATGAGCAATGTTTATCAGTGTGTAAAACC
AATTTTCTAAACTGTGGAACGAACCttcaagaacaatttgagTGTATGCA
AAAACGAAATAAATGTTTCGATGTCTGTGATGGGAACGACGATGATGCGA
AACGTGACGTCATAACAACAGGggaggaagaaagtgaaagtgaattgGAT
TTACTTCGCACACTTTACCAAATCAAACGGCAGTTGATGGCCCAAGAAGA
ATGGTAAATGACTTCAACAACAGCTTCACAAATGATGAAAACTGTCTCCA
TTACCATCGCATTGACATGTCTAATACTATCAACAGACATTAATGCAGCG
TCCATCAACAGGAACAAAATCATCCAACATGAGCAATGTTTATCAGTGTG
TAAAACCAATTTTCTAAACTGTGGAACGAACCttcaagaacaatttgagT
GTATGCAAAAACGAAATAAATGTTTCGATGTCTGTGATGGGAACGACGAT
GATGCGAAACGTGACGTCATAACAACAGGggaggaagaaagtgaaagtga
attgGATTTACTTCGCACACTTTACCAAATCAAACGGCAGTTGATGGCCC
AAGAAGAATGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000116_pilon | genome | sc0000116_pilon:441444..445052 + |
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