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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000114_pilon:347839..350883+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13952.2.p2 ID=MSTRG.13952.2.p2|Name=MSTRG.13952.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3045bp|location=Sequence derived from alignment at sc0000114_pilon:347839..350883+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGAGCTATTGTTTGaagaaaataatagaaaatcAACTTGATATAAATA
CAAGGTCGAAGACAATACATGACAGTATTCCAATCAACGACACGCTGTAC
ATTGGTCAAACGAAGATATTCATAATTACCAAAGAAgatataatttgaaa
ataatattttctggaaaagtggGTGTGTTATGCCATCCAATGGACTTTAA
ACCTCCCGTTTTGAAAGAATACATAAGCACATCACCTCCTTACATAAAAC
ATCGAAGTACTCCCGACAGCGTCGAGAGCAACGATCCTAAACACACGATT
ATTCCTAACGACGACGACGCTCACCGACAATCACCGATCGTTTTCATCGA
CAACGAAGAGAAACATTTCATTAAACGATCGCCGAAAGATTTTGTTGATC
GACGACTTTTGCCAGGTGCAGCACCGCTACCTTTGAAATACAAAGCAAGT
AAAGCATATCATTTACAAACCAGCACAATGGGTCCACTCTGGTGCACAAG
CTCCTGTTGCTCAGGTaagaaaacatattttgcgtTTTAGGGTAATATTC
AAAGGACAAAATTTGTAggtgttatttttcatttattttgctCATGTGGT
AATCTGTCATGTCAAAACCACCGATAGGCAAACACACgaatcaaaatgaa
attatccCAAGTAATTAAGTAATTAGGAAAACCATCATGAAATTAGCAAG
GATGCTTATCAGTATCAAaagtataaaaaacaaaaacacacgAAGTACTG
ATCTGTGGTTTATTCTGTAACTCAATGCTCCCGGCATGAGCTCAAAACGT
TTTGGTTGTGTAATTTCTATACTCATCTATTGTTATCGCAAAAGAAATAC
TCGAACTCAAAAGAAACTTTTATTGTTCTTTGAACtcaaaaattccgaaa
aaaattgtataattttataaaagagggacaaatatttcaaaatttcattc
gcGTAACGGGTGGTCAGTAAATTTTACAAGCTTCAAAGAGGCCGAAGGTA
TAAGTTAACGTAAACAAGATATTTGATAGGGCTGGTATAATACTGATCGA
AAACATTTGCTAACATTAGACCAGACACTGAGCTAGCTTCCAATGTTTTG
ACAAACTCCAGGACACCGTATACCTGTCTTAAAGCATTAGCAATGATATA
ACGTTCGAGAGGGGTATGTCGAGGCGCCATCTCACAGTTATTACGTCGAC
AGAAAAGATATCAATATTCTGAAGTGATAtcttgaaaaagtaaaatttga
cATTTCTCTATTAGTGCAATCTCATGACTGAACGTCGACCAGTCCACAAC
AAATATGCTTTCACAAAAAAGAGTTCATCCTAAAGACTTGATGTTAAACT
ATGTTTCATTTCAACTTCTAGATCAACGAAAACCAACGGCAGCCGAATTC
TTCTTCCCGCCATCAGGGCACGGACAGCGATACCCTTCAACTCACATGAC
TTCACCTGTACCATTGGTGTCGCCCTACCCCTACCCTTCACCACCCTACC
GTTCACCCAAAGAACCACAACCACTAACACCATCATCACCGACATCTTCA
AACTCACCGATTCCATTCTCTCAAGAACAGATCTCCAAAGTTTGCGAAAC
TTTAGAAGAATGTGGCGATATTGAGCGACTATCCCGATTCTTATGGTCAC
TACCCACAACTCCCGATGTCCGTGATGTCATGAACTCAAGCGAAACAGTA
TTAAGAGCAAAAGCACTAGTAGCTTTTCACAATCATCACTTTCATGAACT
TTATTACATACTCGAACACTTTCGGTTCGGTAAAAAATCACATGGTAAAT
TACAAGCAATGTGGCTTGAAGCACATTACATGGAAGCCGAAAGGTTACGC
GGTCGTCCGCTCGGACCAGTCGATAAGTATCGCGTTCGAAAGCGTTTTCC
ACTTCCACGAACCATTTGGGATGGCGAACAAAAGACGCATTGTTTCAAAG
AACGAACAAGAAAACTCTTAAGGGAATTCTACTTGCAAGATCCTTACCCA
AGTCCATCCAAGAAGCGCGACCTTGCAGAAGCAACACACCTGACACCAAC
GCAAGTTGGTAATTGGTTCAAAAATCGACGACAAAGAGACAGAGCTGCTG
CAGCCAAACACAAGTAAGTACCCTAAACCTCAACGACCTAaactgttttt
aaaatgtttagcTTAACTTATCAGTGGtcattttttaatctttgtggaca
atttttaaacatttctttttttcattttctgcaCAGAAACCAACGTCAAG
AGATGAACATGCAACATTCCTTCGAAGATGACGATGATAGCGACACGTTG
GAAAACATCCTCGACAACGACGAACAAGATTCCGATTCCGAACATTCTAC
CGACAACCGCAAAACTTTACAGTCCAATCCCGACAGCGACAAATTGAAAG
CTGTTATCAATCACCGATTATTCAGCGATCCAAATATGGTCAAGTCTGTA
CCCATCTTGACACCCAAACCAACAACGAATTCGCACTCGACTTTTATGAT
GTCCGACATTCTAAAGAAAACCTCATCCACGCCACCTACCGCAAACATGG
TCCTAAAGCCCTATCTACACAATAAACCAAACCTGTTTGTACACACGAGG
TAAATTGGTCGGTAGCAaatcaatgaatttttttaagaaatctgCTGTGC
AGATCTGTCATATattttttggattattttatgaatatgtatgatattat
tgaaaagaaaacttaaaattttaagagATATGAAGGGATGTACATAatat
tgtttttactttttagttattttttagGCCTTAGGCATTTCCCCATTATC
CCTTTCTATTAGACTATGTAATATTTTCTTCTCGGCGaagaaaccaaaat
ttactAGACTcgccaaaataatttcaaagctaactttttcaggcattttt
atttttcagttttattagctctctatttttactttgatggatttttatca
aaatatatctaGAAAATGTATattaaaatgtaacttttatcaCTAGTTCA
ttctttatcattgttttttcctGAATCTCAACTTGTaaatagaag Coding sequence (CDS) from alignment at sc0000114_pilon:347839..350883+ >MSTRG.13952.2.p2 ID=MSTRG.13952.2.p2|Name=MSTRG.13952.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=684bp|location=Sequence derived from alignment at sc0000114_pilon:347839..350883+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACTTTAAACCTCCCGTTTTGAAAGAATACATAAGCACATCACCTCC
TTACATAAAACATCGAAGTACTCCCGACAGCGTCGAGAGCAACGATCCTA
AACACACGATTATTCCTAACGACGACGACGCTCACCGACAATCACCGATC
GTTTTCATCGACAACGAAGAGAAACATTTCATTAAACGATCGCCGAAAGA
TTTTGTTGATCGACGACTTTTGCCAGGTGCAGCACCGCTACCTTTGAAAT
ACAAAGCAAGTAAAGCATATCATTTACAAACCAGCACAATGGGTCCACTC
TGGTGCACAAGCTCCTGTTGCTCAGTGCAATCTCATGACTGAATGGACTT
TAAACCTCCCGTTTTGAAAGAATACATAAGCACATCACCTCCTTACATAA
AACATCGAAGTACTCCCGACAGCGTCGAGAGCAACGATCCTAAACACACG
ATTATTCCTAACGACGACGACGCTCACCGACAATCACCGATCGTTTTCAT
CGACAACGAAGAGAAACATTTCATTAAACGATCGCCGAAAGATTTTGTTG
ATCGACGACTTTTGCCAGGTGCAGCACCGCTACCTTTGAAATACAAAGCA
AGTAAAGCATATCATTTACAAACCAGCACAATGGGTCCACTCTGGTGCAC
AAGCTCCTGTTGCTCAGTGCAATCTCATGACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000114_pilon | genome | sc0000114_pilon:347839..350883 + |
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