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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:382302..389048- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13872.2.p1 ID=MSTRG.13872.2.p1|Name=MSTRG.13872.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6747bp|location=Sequence derived from alignment at sc0000113_pilon:382302..389048- (Clytia hemisphaerica_ch_hm2_pilon)
AGATCTTTGGAGTGAAGTGTTTCATATAAGTTTTGCAGAACTTTTGGCTG
TCATTTTGTTGAGAAAAGGAAACTTTTTGCTGATATTTTAATTTGATTAA
AATAAAATGGTAGAAGAAAACTTTCCAATCATAGATATATCATCACTGGT
ACAAACTCAATGTCAAGATGAAACCATTTTACAAGAAGCAGCCAATCAAT
TGATGGATGGTTTTAGTAAATGGGGATTTATTTATTTGAAAGGTCATCCT
ATTCCTGAAGAATCGATTGCAACATTATTCAAAGAATCTGAAAATTTCTT
TACACAACCTGTCGATAAGAAACGAGAAGTAGAAATGGACGCAACAGATA
GTGATTATATTATGGGGTATGTTCCATTCAAAATGGAAAGAATCGATCCT
AGAAAACCCTTTGATCTCAAAGAAGCCTTTGATTACAAACACCATATCCG
ACAAGATATGAAACAAAAATTGCCACCGCAATTTACAAAAAGCCTCGAAA
ATTTCTTTGACGAATGTTATGATTTGTCATTGCTGCTGTTCAAATTACTC
AATAAATCCTTGGATATTGAGGATGATCAATTTTTCCCAAATTGCCACCG
AAAGTCTGGTTATTTTGGAAATGGGACCTTGTTAAGGTCTTTATATTATC
CTGGTATAGATTCTAAAGATATTCTTCCAGAGCAAAGTAGATGTGGAGTG
CATGCAGATTATGGAACACTAACTTTGTTGTTCCAAAACGCAGAGGGTTT
AGAGGTAAAACTATTCAGTGTTCAAAGTTTTCGAGTCTGCTAAATTGCGT
GGGTTGCGTGGGTGCGTGGGTCAATATTTTTGCGTGGGTTGATATTTTTG
CATGGGTCATTTTTTTGCGTGGGTGCGTGGGTCAAAATATTTTTTGCGTG
GGTCAATTTTTTTGCGTGGGTCAATTTTTTTTGCGTGGGTCAAATTTTTT
GCGTGGGTCATTTTTTTTGCGTGGGTAAAAAATTTTGCGTGGGCCATATT
TTTTTGCATGGGTCATTATTTTTTGCGTGGGTCATATTTTTTGCGTGGGT
CATTATTTTTTGCGTGGGTCAAAGTTTTTGAGTGGGTCACTATTTTTTGG
TGATTTTTTAGCTAACTCGATTTTTTTACCAAATTAAAACTTTCGAGTTA
GCTTAGACGTTTTTTTTGTCAAATCTTGGTCAAGTTAAAATTTTCAAGTT
ATCTTATACAAAAATGTGTTGTGTATAAATCTACGAAAACTAAACAAAAG
CACACAGTTTTTATGTAGTAACACCTTGTGGTTTATTTTACATAGCTGCA
CTTATTTACTATAACATTATACAGAATCAACACACACCCGCCTAATTTTT
GTAGACACACTTCAGGATCACACTTTTGAATTTTAGCATGCTATATTTCA
AGATTCCAGTGTCATGGAAATAAACACTATAACTTTAATTTTCTCCTCCC
TTTTCTATTGCTTTGAAAAAAAGTACAGCGTCTTTATTTCGTCCAATTTT
TTAAATTGGCCTTTAATGTACTTAAATCAAAGAAATTACAAGTGGGGTGG
ACGAAATAATTGACAACGATTAAATTGTTTAGTAATCGGTCGCCTAATGA
ATATAACTTTTGTAGAAAAATTTTCAGATTTTGTCGCCATTTGCTTTGTT
CTTTAACACTCAAAGGAAACCCAAAAGATTAAAGCGTTGCTATAAGAAGC
TTTAAAGCTTCTAAAAAGATTCTACACGTTTTTTTATATAAGAACAAACT
ATATAAAAACATAAGGCTTCAAATCCAAAAAACTAAGAACATCCAAAGGC
TTCGAAAATTGTTGACGTTCTTATAAAAAAAACGTGTATAAAGCTTCCTC
TTATAAAAAGACAGCTACAGCTATGCAACATAAACAAAATAACCAAAACG
TGTTATGTAAAACACATCCAACATTTTGGATGTGACCAGTTCGAATTTCA
AGGGAAGGTATTTTTTCGAATTACAGAGAGAATTTCGACCCACGCAAAAA
TTTTGACCCACGCAAAAAATATGACCCACGCAAAAAAAATTGACCCACGC
AAAAAATATTTTGACCCACGCAAAAAATTTGACCCACGCAAAATTTTTGA
CCCACGCAAAAAATATTTTGACCCACGCACCCACGCAAAAAATTGACCCA
CGCAAAAATATCGACCCACGCACCCACGCAACCCACGCAATTTAGCAGAC
TCAAAGTTTTCCCGTCTCAGACGGATTTCCGTCTCAGCGAGGTACAAAAA
AAGACTTTTCCGTCTCCAAATTCAACAAAATTCTGCAAAACATGAATAAT
ATGGCCAGATTTGTTGTTCAAAGTCCATTTCCGTCTGTGATGAAAATTTT
GCTTTGACCACTGCTATATTTATGATCATTTCTAACTTTTTTACTGGCTT
ATACATTTGTATTAGAAGGTCGTATAAGAAGTAAATAGTGTCCTCTAGTG
GTGTCAGCCAGGACTTGTCCATTTAAGTCTTTTTTTAACAACTTACTTTT
AATTCTAGCTTTTAAAGGACTTTGATGCAATGATATAACTAAAAAATTAG
TGTCATCTTTCCCTCAGGTTAAATCACCATCAGGGAATTTCATCAAAGCG
AAATTGATCGAAGGAACAATTATAGTGAATGCAGCTGATCTTTTAGAACG
TTGGTCAAGTGGACGAATCAAATCTACTTTACATCGTGTTTCCTTACCGA
AGGATACAAACCAACCAAGACAATCAGTTGCATTCTTTGTGATGCCTGAC
AACGAATGTATAGTGGAATGTTTAGATGGCTCCAATACTTACGAACCAAT
CACAGCTTTCGATCATATTGACAATATGTACAAAGCCACATTCAGAGATT
GAAAATTAACAACAGACTTTGCACCCACATTCCTCTTGGTTTGTTTTCAT
GATTTACTGACCGAAATTAACGTTTGTGTGGCATACTCTTTGTTGTCAAA
ATAATTAGAAGATATTAAGTAATTAAAGTGGTGCATATTCAATTTTTTTA
AATGTTCTTCTACACATCCATGCATGGACACTTGGACACAATTCCACAAC
ACAAAATTTAGTTTTTTATACTTAAAGCTTTGGCATATTTTTGTTTTCTC
TTATATTTATATTTTGATAAAATTTATATTTTGATAAAACCTTTTTTTTT
TACTTGTTTTTATATTTCTCATATATATATTTTTTTGATTAGGAATTCAT
ACAAATCTTGAGTACCTTAAGGGAACTCGCCAAAATTCGCCAAAATTAGT
TCCCGCCAAAATTAAATATTTTGCTCACTCGCCAAAATAAGTTCCCGCCA
AAATTTAAATTTTTTGTTTCCTTGCCTATTAATAACCCCTGAAATTCATC
AAAATTGCTCAAAATAAGGCAAAATAAAACATATTTACGCTGTCATTCGC
CAAAATTAGTTCCCGCCAAAATTAAAAAATTCACTATTCACCAAAATAAG
TTCCCGCCAAAATTAATTTTTTTTAAGATTTTCGCCGCTCGCCAAAATTA
GTTCCCGCCAAAATAAGTTCCCTTAAGGTACAGGGATCCCACTCCTCCTA
AAATTCCTAAAAATCCTAAAATAAGACAAAACTCCTAAAATCCTCCTAAA
ACTCAACAAATTCTCCTAAATTCATAAAGTCTGAAAACTTTATCAAGCAC
GACGGTAGCAAATTATGTTTGTATATTTGTATAATCAGACAGGAAGCTAA
GATTTTTTTCTCATTAAAGTCAAAACAAACTGGGAGTAGTAAGCTACCTG
ACCTTGAAACAACATGTTTAAAATATATTTTTGCACTGAAATATTTGGAA
CAAAAGCCTATGTTAATTGAAAGAGTGCAGACTGTGTTCAACAAAGAGGG
CTCAAATGTTCAAGAACAAGGTTTGGTGGTTTGCGCCCTCATCTGTGAAT
TTTTTACTTGAGCATAGAATGCACCCCCCTGAACTTAGGGGGGGGGCTAA
ACCATTTTTGCTTGATTGGGGACTGTATTTCAAAAAAAGATACTGGGACT
AGCTTGCTAGGGGGTTGAGTGTTAAGTAATAGAACTGTGGTCAGAGCTGA
TAGGTTACAAATATTTTAAATTATGCCAAAAATCTATGCTGTGGGGAAGG
TTTTGACCCCTCTTAAAAAAATTTATCTTATCTTATTAAGAATTTGCATA
TAAAATTTCTATGATATTTTGTTTTGTGAAAGTGGAGGCTAAGTTTTAAG
AGTTTTTCTGGGGCTTTTTTTCCTTCGCCTCCCCCCTGAAAAATGCTGGG
GGCTGGACCCCTCTGCACACTATGGCATAGGCTTTGTTAGAACGAATAAT
ATAATACGTAAAGTAATTTTATTTCAGTCTTCCTGTGGGTGATTTTTTTT
CGGTAGAACATCTTTCTAATGGCTGACTTCAGGTCGATTTTAGAAATTTA
TTTCTTAAATTTTCCTAAAATGCTCCTAAAAAATTGAAAATTCTCCTAAA
ATTCTCCTAAAATTTGGCCAAAATCCTCCTAAAATTTGTCCTAAAATTAA
CATAATCAGGCGTGGGATCCCTGAAGGTACGCAATCACTGAAATGATCTA
GATCTTCCTTTATATTTAGTTTATAAGGGCGTAACTTCTGAAACTATGAA
CCAAACATAAATATATCAATAAGTGCTTAAACTGACAGCCTTTTGAGCTT
TAGCCTTTTTCAGTGTCGCTTCTCAAGTTATGAGAATAAGTGTACACTAT
TTCTGGGAGAATTTCTTCATAAATCTTTTTAAATTTTTAATTTCAGAGAG
AGTATATAATGGTAGAAGAAAACTTTCCAATCATAGATATTTCATCACTG
GTACAAACTCAATGTCAAGATGAACCCATTTTACAAGAAGCAGCCAATCA
ATTGATGGATGGTTTTAGTAAATGGGGATTCATTTATTTGAAAGGTCATC
CTATTCCTGAAGAATCAATCGCAACATTATTCAAAGAATCTGAAAATTTC
TTTACACAGCCTCTAGCAACTAAAAAAGAACTCTCAGTCGATATCAACGA
TACTGATAATATTTCTGGTTACACTCCTTATAAAATGGAATCATTTGATT
CATCCAAACCGTTCGATCTCAAAGAAGCATTCAACTATCTTCACCATGTA
CACCCAGAGATGAAGGACAAATTACCAAGCACTTTCCTACAATCGTTAAA
AGACTTTTTCGATCGCTGCCATGAATTAACACTTTTGCTATTCAAACTCC
TGGCAATCTCATTGGACGTCAACGATTCAGATTACTTTCCAAACGCACAT
CAAAACATAGGCTTTCTTGGTAACACAACAGCATTGAGATCTTTATATTA
TCCAGGTGTTGATTCTAAAGAGATTCTTCCTGAACAAATTAGGTGTGGTG
AACATACAGACTATGGAACGTTAACTTTGCTTTTCCCAAAAGCTGAAGGT
CTAGAGGTAAATATAATCAGCTTTTTCGAGAACCAAGAGAATCCTACTGT
ATTGATGCTTTCAAGTGAGGCTCCGCTGTTCCTTTTATTTCTTGATTGTT
TGGCTGGAGTTTTATTTTTAAGCCGTTCTTAACTGCTCTCGGGTACCAAA
TAGCCGGGGGGGGGGGTTGGAAAAAATCTCGGGGAGGGGGTTGGAATAAG
AATGTCCTGGGTGGAAAATTTTCGAAAAATTAAATAGCGGCGGGGACGGC
TATTAAGTACCCCAAAGTAATTTTCTTTACTCGAGAGCGTATAAGTACCT
ACTTGGTCGCCCATGTTTGAAATTGTAATCTTACATCTTACATCATCAAT
TTTACATCATAATCTTACAGATGTTCTTGTGCTTAGAATTGATCAATTGA
GCCTCATGAGCCTCGTTTTCTATTGAAGAGCCCCCTCCCCCATCGGACCT
TCGATTCACGCAATCACGCAAAGTTTTTTCGCAATTCACGCAATATTTGT
TCACGCAAAGCTTTCCAATTCACGCATTTACGCAAGTCAAAAAGCCCATT
CACGCATTCATGCAAACCGCTAGGGCTCCCATCGAAACTGTTCTTAACTT
CAATTTGAATAGGTATTCATTGTATGGAGATTACTAGGGCACTTACGGTT
TGTATTTCTATTTCTATCGTATTTTGATTAAGTTTTCTAAAGCTCAATAT
ACAACATACAAAAACGGCCTTTTTGGACGCGCTCTGAACTGTCTGGGGAA
CAAGATTGCATAAGCATTAGCATTTTGTCATATTTTTTTCGGTCAATTCA
TTATTGACGTATATTCTTACTTATCTATCTGTCAGGTTAAATCACCATCA
GGGAATTTCATCAAAGCGAAATTGATCGAAGGAACAATTATAGTGAATGC
AGCTGATCTTTTAGAACGTTGGTCAAGTGGACGAATCAAATCTACTTTAC
ATCGTGTTTCCTTACCAAAAGATACAAACCAACCAAGACAATCGATTGCA
TTCTTTGTTAACCCAGATAACGAAACTTTGGTGGAATGCCTCGATGGTTC
AAATACTTGCAAACCTATTCGTGCTTCTGATTGGTTAACAAAGAGGTTTG
GGGAGACTTTGAGTTAGAATACTCTGCTGACTTTATAACTAATAATGTTT
TACAGATTCCCAGGCCACCTTGCAAGCACATGGTGGGCCTCTATAAATCG
CTCATACATTGGTTTGGTTTATTAAAGTTTTTATAAAGTTAGAATTTTAA
TTACATCTCGTATTTCTTTCACTGGACCCGACCTGCTTGCTTGCAGTTTG
TGAACATTATTTGAGTGCCATTACCTGAAAGTTAATGAAAAGCTTAC Coding sequence (CDS) from alignment at sc0000113_pilon:382302..389048- >MSTRG.13872.2.p1 ID=MSTRG.13872.2.p1|Name=MSTRG.13872.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1860bp|location=Sequence derived from alignment at sc0000113_pilon:382302..389048- (Clytia hemisphaerica_ch_hm2_pilon)
GTTAAATCACCATCAGGGAATTTCATCAAAGCGAAATTGATCGAAGGAAC
AATTATAGTGAATGCAGCTGATCTTTTAGAACGTTGGTCAAGTGGACGAA
TCAAATCTACTTTACATCGTGTTTCCTTACCAAAAGATACAAACCAACCA
AGACAATCGATTGCATTCTTTGTTAACCCAGATAACGAAACTTTGGTGGA
ATGCCTCGATGGTTCAAATACTTGCAAACCTATTCGTGCTTCTGATTGGT
TAACAAAGAGGTTTGGGGAGACTTTGAGTTAGATGGTAGAAGAAAACTTT
CCAATCATAGATATATCATCACTGGTACAAACTCAATGTCAAGATGAAAC
CATTTTACAAGAAGCAGCCAATCAATTGATGGATGGTTTTAGTAAATGGG
GATTTATTTATTTGAAAGGTCATCCTATTCCTGAAGAATCGATTGCAACA
TTATTCAAAGAATCTGAAAATTTCTTTACACAACCTGTCGATAAGAAACG
AGAAGTAGAAATGGACGCAACAGATAGTGATTATATTATGGGGTATGTTC
CATTCAAAATGGAAAGAATCGATCCTAGAAAACCCTTTGATCTCAAAGAA
GCCTTTGATTACAAACACCATATCCGACAAGATATGAAACAAAAATTGCC
ACCGCAATTTACAAAAAGCCTCGAAAATTTCTTTGACGAATGTTATGATT
TGTCATTGCTGCTGTTCAAATTACTCAATAAATCCTTGGATATTGAGGAT
GATCAATTTTTCCCAAATTGCCACCGAAAGTCTGGTTATTTTGGAAATGG
GACCTTGTTAAGGTCTTTATATTATCCTGGTATAGATTCTAAAGATATTC
TTCCAGAGCAAAGTAGATGTGGAGTGCATGCAGATTATGGAACACTAACT
TTGTTGTTCCAAAACGCAGAGGGTTTAGAGGTTAAATCACCATCAGGGAA
TTTCATCAAAGCGAAATTGATCGAAGGAACAATTATAGTGAATGCAGCTG
ATCTTTTAGAACGTTGGTCAAGTGGACGAATCAAATCTACTTTACATCGT
GTTTCCTTACCAAAAGATACAAACCAACCAAGACAATCGATTGCATTCTT
TGTTAACCCAGATAACGAAACTTTGGTGGAATGCCTCGATGGTTCAAATA
CTTGCAAACCTATTCGTGCTTCTGATTGGTTAACAAAGAGGTTTGGGGAG
ACTTTGAGTTAGATGGTAGAAGAAAACTTTCCAATCATAGATATATCATC
ACTGGTACAAACTCAATGTCAAGATGAAACCATTTTACAAGAAGCAGCCA
ATCAATTGATGGATGGTTTTAGTAAATGGGGATTTATTTATTTGAAAGGT
CATCCTATTCCTGAAGAATCGATTGCAACATTATTCAAAGAATCTGAAAA
TTTCTTTACACAACCTGTCGATAAGAAACGAGAAGTAGAAATGGACGCAA
CAGATAGTGATTATATTATGGGGTATGTTCCATTCAAAATGGAAAGAATC
GATCCTAGAAAACCCTTTGATCTCAAAGAAGCCTTTGATTACAAACACCA
TATCCGACAAGATATGAAACAAAAATTGCCACCGCAATTTACAAAAAGCC
TCGAAAATTTCTTTGACGAATGTTATGATTTGTCATTGCTGCTGTTCAAA
TTACTCAATAAATCCTTGGATATTGAGGATGATCAATTTTTCCCAAATTG
CCACCGAAAGTCTGGTTATTTTGGAAATGGGACCTTGTTAAGGTCTTTAT
ATTATCCTGGTATAGATTCTAAAGATATTCTTCCAGAGCAAAGTAGATGT
GGAGTGCATGCAGATTATGGAACACTAACTTTGTTGTTCCAAAACGCAGA
GGGTTTAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000113_pilon | genome | sc0000113_pilon:382302..389048 - |
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