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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:1097998..1103625- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13845.1.p1 ID=MSTRG.13845.1.p1|Name=MSTRG.13845.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5628bp|location=Sequence derived from alignment at sc0000112_pilon:1097998..1103625- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTTTTGATTTGTATTCTGTTCTGTTCTGTCATAGATAAATATTTAAA
AGTTAAGGAGTGATACAAAATAAACTATGCTGGGTTGATATTTATTTTCA
TCCCGAAAGAATCTGCTTAGCGATCAATAAAGGTTGGATTTAGAAAATTG
TTTTTAAAAGAGAAGTCTTTTACGTTACAGAAAAAGATGTTTTCTCGATT
AATACTTGCATCACTGATCATAATCTTTGTTCTTTCATGGGTTATCGAGG
CAAACGTTTCAAATATAAACAACCAAACTGAATTTCCTTTGGAAGAATTC
ATCCAATCTGCGTTTACGTACCCTGTGAATTTTACCGGAGACTTCATGGA
AATAGCGAAAGAGACTTTTCTATGCGGCTCCGATTGTTGTGATTGTGAAC
CAGACTGTTTCAGAAAACAAAGTTGCTGTATTGACAAATTATGGAACACT
TCGAACCCAATTCCCTTATCAGAATACATGAAAAACTTTAAAAAAGAGGT
TGACAAGACTCTGCCCCTGCAATGTAAATTCTTCGAACCATTCGGTAGTT
TACCAATATTTAAACAGATGACTATAGCTAAACCAGATAGTAGATTGGAA
TATTTCTTGGTCAATTCTTGCCCGCCAGACTCTTCATACGCGACAGAATG
TATAAAGGACGAAAGTTTACCAGATATTGAAAGACTACCAGTTATCGATA
AACGATTCTATATCTTCAAGAACAAGTATTGCGCAATGTGTAATAATGTT
GAAAGTTTCGTTAACTTGAACTTGACTGTAAAATGCACCACGCCAGTAAT
TACTGGACAACCAACTGTAATTATAACCGCACCGCCTAACCCGCCCTTCA
CCAATCCATCTGTACTGCCAAAGGAAACATTCACTGTTCCTACCCTCCCG
CCCAATCCAGGATTCACTGTTCCACCCCTTCCGCCACTACCAGGATTCAC
TGTTCCACCACTCCCGCCAAAGCCAGAAGTTACTGTTTCAACCCTCCCGC
CCAATCCAGAATTTACTGTTCCAACCCTTCCGCCACACCCAGGAGTTACA
GATCAACCCCTCCCGCCACAACCCGAAATCACTTCACGGCCAACCCTTTC
ACAACCAGAACCAGAACACACTGGTCCGCCCCTCTCGCCTAATCCCGAAT
TTACTATTCCACCCCTCCCGTCACACCCAACCGAACCAGAGGTCAAAGCT
AAAGATTTAATGAATGAATTCCAAGAATGTTTGGTACAAGTCAATCCAAA
CCCTCAACAAGCACCTCATAACCGTATGGACAAACTCAAATGCAACGCTC
GCAAAGTACTAAAACGAAGATGCCAAGACCCAAATTCTTATTGTCATTTA
TATAAAAGTTCCATTGCAGGTTACCAGAACCTCCATTGTCATCAATGCAA
TGGAGAGTTGTTTACGGAGAGCATTCTTCAGAACCAGTGTGTTGCCTTAC
CTGACGAACATATTATATGGTCAATTCACTTAAGCTTCACGCGGACGTCC
ACAAGACTGACATTGGATACACAGGATGAAAATGTCGGTGAACAGGTAAT
GGGCTCTTCTTGAAAATGTTCGTACATGGGGGATGGAGGATATAGTGTCC
GGGGGTAGTGAAAAATTCCACAAAATTTACCTTGTCCGGGGGGTAAACTT
GCTCTGTTTTAGGGTAAATGTCCAGAGGGTCAACTGATGCTTGTCGGGGG
GGTTAGACTTGCTGTTCGAGGGTCCGAGGGGTAAATTTCCAAAAAAAGTT
ATATTCTCCACCCCCCCCCCCATATTCAATTTTTTTTCTGGAAAAGCCCA
ATGAATATGCACGTTTTTTTTTTTTCAGTATTGAAACTTTTCCGTAAATA
GAAAATCTATCCAGTTGAGATTATTACTTAGGTTTCTGCGGTGTAAGCCA
TGCAGATTCACCAGGGGTGTTGCAGCACTGTTCAGTTATCTTATAAGGGC
AGAAGTAGTAAATTTAGCCTGATGCTTGCTGTTCTTATTTTTCGTGATTT
TCAGGCTTAAATGTTCTTAAAATATTCTTAGTTAAGTTAAAAGAGGATAG
AATCAGTATTTTTTATGCCGTTTCTAAAATCTGAGACTTGGTTTGTTTTT
AATTTGTTATTTATACAGTTTAGTCTCTATAAATCGAACCCACACGGGAA
ACACAAATTTATACAAGTTAAGGAAATTTATGTACCCAGCTGGCACACAA
CGTTGTTTCAACGTTCATCTAACGTTATATGGACGTTGTGAAACAGTGCC
AGCTGGGTAAGCTTTATAAGCATCGTTAACTGAAGGGACGAGAAAACTTG
TTCGAGTTAAGGAGATATTCGAGATATAAAGGTTCGAGTTAAAGAGACTC
TAATGAACATACCTTATATTTCCCTTGTAAAATACTTTTTTTTCTTTTTA
GGTCCATTGCAGCTCTGGACAATTGTACAATATTCTGAAAGGCACATGTG
AAAAATTCACTTGCTCAGCTGGCTACTACGCAAGAGAAAAATATTGTATC
AAAAATAACTCATCCTTTCCTCATTCACAAGACTACCAGTGGTATCGAGA
CACCAACCAGGTGGAATACTACCTCACACACGTCTGTGTCAGTATCAGTG
TCTTAGGAGGTGTCCTCCTGATTGTGACACATACCCTCTTTAAGGAGCTA
CGGAACCGTGGTGGTTTACTTCTAATAGGACTCTCATCTGCTATTCTCTT
CACAGACATCCTGTTTTTCATTTGTGAGCAAAATAATAAAGTTGTTGGTA
TCTTATTACATTGGGGACTATTGGTTATCAATCTGTGGACCATCATAATT
GCCGTAGATCTTTGTGCAACATTTTTGAGGAAAGGATTTAGAACTTTCCG
CAATACAGTTTCATGGATGGATTATTTTTACTTCAGTTTGGTTGCTTACG
TCACACCATTGCTGATTGTTATTTTATGTGTGATTCTGGATGAAACGAAC
ACTATCCATTTTGGTTATGGTGAAAATAATGTATGTTGGATGTCCTCATA
TTATCCAAGGATCATATCATACACAATTCCATCGTTGCTTGTGAATTTAT
CATGTATCGTTTGTCTTCTTGTCTTATTGATGTACCTCAAAAAACAAAAT
CAAGAACGAAAATCAAAACTGAAATCGAGTTACCGAGTCAATCTAACTCG
TCTAGCTTTGAAACTCGTTTCTTTACTCGGTGTTATCGAGTTGGTTGGTT
TTATACAAATTCCAAACTCAACATTGACAGAAAACGAAATGAAATTTAAC
GCGAGTTTCGCTTTCATTTACGGCGTTTTACGTTCGTTACGAAATACTTT
TATATTTTTGTTCGTGCTTATGGATAGTAAAACGTTGAAATTATATCGCA
AATTTGTATCGAGTATGAGAACGATCAACACAAGTGAAGTTTCAATTCCA
GATACTGTTCTGACGAATCTTAATGCGGCCTCGAGTGTGGCTACAGAGAC
CAAGTAATGAAAATGATAATTTCTTCTTCTCACAAACTCGGTATGATTTT
ATTTATCCAGTGGGGATAAAAATAACCGATGGCGATTGATGTTCCCATAG
GCGAGGATTGTTTTTCTTAATTAGTTTCAGTGGGGACAAAAATTGAATGA
TAATTTTACACCGAGGACGATATTTTGACCTATTTTTCAGTGGGAAGGGG
TCCCAGTGGATCTGTGAGAAGGGGGTGTTTTTTTATAATTGATACTGTAA
TTTTTGATAAAATTAGTTTATTATGGTTATTATTGGACCTACCCCGGTGG
GGTGGAGGTCCTATAAATTAACCCGTGTTCGTTAGTTCGTTCGTTCGTTC
GTTCGTTCGTTAGTTACCAACTTTTCTCGAGATTGGCTCATTCAATTTTT
CTGATTTTTTGCACAAAGGTGCATTACTATAAACCCTCGAATGTGACGGA
GCCCGATTTTCGAAAAAAAATTTTTTCCGGCCGGTAGAACCGGAAATGTC
CCGAAAAAAGCGGTTTTTTGAGATTTTCTCGAGATTTTATCATTAGTTTT
TTGCGATTTTTTGCACATAGATGCACATTAGTACTGCCGAAAAGGTGTCA
AAAACCGTTTGCCGAAAAAAAAATTTTTCCGGTCTGTAGAACCGGAAATG
TGCCGGAAATCGTCGTTTTTTCACATTTCCGTCACATTTTTTCAACCTAT
TTAATTGTTTCTTTACAGAAAAAATGTTCTTTATGATGATGCCCAAAACT
TAGCATCGTTTGATTTCCAAAAAAAAATCATCCTTTGAATCCGGAACTCC
TTAAAAATCGCCGGGGAACAGCCGAAAACCGGCGTAAAACGGTTTTCCTT
CATTTTTTCAACTTATACTCGACAGATTTTCATGATTTTTTGCACAATGA
TGTAAAATGGCAATGCCCAAAATGTGACAGAGCCCAATTTTCGAAAAAGA
AATTTTTCCGGCCGCTAGAACCGGAAATGTCCCGAAAAAAGCGGTTTTTT
GAGATTTTCTCGAGATTTTCTCATTAGTTTTTTGCGATTTTTTGCACATA
GATGCACATTAGTACTGCAAAAAGGTGTCGAAAACCGTTTGTCGAAAAAA
AAATTTTTCCGGTCTGTAGAACCGGAAATGTGCCGGAAATCGTCTTTTTT
TTCACATTTCCGTCACATTTTTTCAATTTATTTAATTGTTTCTTTACAGA
AAAATGTTCTTTATGATGATGCCCAAAACTTAGCATTGTTTGATTTCCAA
AAAAATCAGCCTTTGAATCCGGAACTCCTTAAAAATCGCCGGAACAGGCG
AAAACCGGCGTAAAACGGTTTTCCTTCATTTTTTCAACTTATACTCGACA
GATTTTCATGATTTTTCGCACAATGATGTAAAATGGCAATGCCCAAAATG
TGACGGAGCCGAGTCTGATTCCTTTAAAACAGAATTTTCCGGGCGGAAAT
ACCGGAAATATGCCGGAAATCACAGTTTTTGAAATCAAATCTTTTTCAAT
AGTGTTGATAGTTTCTCTCAATAGATATGCTTTCATTTTCTTTATTTTTT
TTTTATTTTGACCAGTTATGTCTTATGTGTTTCATTGTTTCAATGTTCAC
TGATTAGTTTGATAACCAGGTAGGTCCATAAAAGTATCGCTTGTTTATTA
TTATTTTTGGATTCCCAAAAATCATAGTCAATGAAGACGTTTACATTTAT
TGGCAAAGACCTTATCTTAGAATTTCTATGAAAATGTGTTATTTTTTTAA
TTTGACAGGGGTATACGGGGTATACACGCTTTTTTCATAAGAACATCCAA
AATTTTTGAAGCCTTTGGAATGTTCTTAACTTTTTGAGTTTTAAACCTAA
AAATGTTCTTAACATCCATGGCCTCCCCCACTTTTTGGTCCATGTCATAC
GTTTTTAAGAGCCCACTCACTTAAAATGGCTCGTCGGGGCCCATGCGTAC
ATATGTTTATATGTTCATATTTTAATCATTTCGATTTATAAAACAAACCT
TTGAAACAAACTGTTTGCCAATTTATGAAACGCGAATATGCGCTTAGCCA
TCTTTCAACAATAAATTCTAGATTGTTTTGATTTTAGACCAATCGAAAAC
GTTTACGAAATCTCATTATCCAATCAGATGTGAGAAAATATGTTGAATAA
ACCAATCGAAATACGATTTGGTTTCTAT Coding sequence (CDS) from alignment at sc0000112_pilon:1097998..1103625- >MSTRG.13845.1.p1 ID=MSTRG.13845.1.p1|Name=MSTRG.13845.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2844bp|location=Sequence derived from alignment at sc0000112_pilon:1097998..1103625- (Clytia hemisphaerica_ch_hm2_pilon)
ACCAATCGAAAACGTTTACGAAATCTCATTATCCAATCAGATGTGAGAAA
ATATGTTGAATAAATGTTTTCTCGATTAATACTTGCATCACTGATCATAA
TCTTTGTTCTTTCATGGGTTATCGAGGCAAACGTTTCAAATATAAACAAC
CAAACTGAATTTCCTTTGGAAGAATTCATCCAATCTGCGTTTACGTACCC
TGTGAATTTTACCGGAGACTTCATGGAAATAGCGAAAGAGACTTTTCTAT
GCGGCTCCGATTGTTGTGATTGTGAACCAGACTGTTTCAGAAAACAAAGT
TGCTGTATTGACAAATTATGGAACACTTCGAACCCAATTCCCTTATCAGA
ATACATGAAAAACTTTAAAAAAGAGGTTGACAAGACTCTGCCCCTGCAAT
GTAAATTCTTCGAACCATTCGGTAGTTTACCAATATTTAAACAGATGACT
ATAGCTAAACCAGATAGTAGATTGGAATATTTCTTGGTCAATTCTTGCCC
GCCAGACTCTTCATACGCGACAGAATGTATAAAGGACGAAAGTTTACCAG
ATATTGAAAGACTACCAGTTATCGATAAACGATTCTATATCTTCAAGAAC
AAGTATTGCGCAATGTGTAATAATGTTGAAAGTTTCGTTAACTTGAACTT
GACTGTAAAATGCACCACGCCAGTAATTACTGGACAACCAACTGTAATTA
TAACCGCACCGCCTAACCCGCCCTTCACCAATCCATCTGTACTGCCAAAG
GAAACATTCACTGTTCCTACCCTCCCGCCCAATCCAGGATTCACTGTTCC
ACCCCTTCCGCCACTACCAGGATTCACTGTTCCACCACTCCCGCCAAAGC
CAGAAGTTACTGTTTCAACCCTCCCGCCCAATCCAGAATTTACTGTTCCA
ACCCTTCCGCCACACCCAGGAGTTACAGATCAACCCCTCCCGCCACAACC
CGAAATCACTTCACGGCCAACCCTTTCACAACCAGAACCAGAACACACTG
GTCCGCCCCTCTCGCCTAATCCCGAATTTACTATTCCACCCCTCCCGTCA
CACCCAACCGAACCAGAGGTCAAAGCTAAAGATTTAATGAATGAATTCCA
AGAATGTTTGGTACAAGTCAATCCAAACCCTCAACAAGCACCTCATAACC
GTATGGACAAACTCAAATGCAACGCTCGCAAAGTACTAAAACGAAGATGC
CAAGACCCAAATTCTTATTGTCATTTATATAAAAGTTCCATTGCAGGTTA
CCAGAACCTCCATTGTCATCAATGCAATGGAGAGTTGTTTACGGAGAGCA
TTCTTCAGAACCAGTGTGTTGCCTTACCTGACGAACATATTATATGGTCA
ATTCACTTAAGCTTCACGCGGACGTCCACAAGACTGACATTGGATACACA
GGATGAAAATGTCGGTGAACAGACCAATCGAAAACGTTTACGAAATCTCA
TTATCCAATCAGATGTGAGAAAATATGTTGAATAAATGTTTTCTCGATTA
ATACTTGCATCACTGATCATAATCTTTGTTCTTTCATGGGTTATCGAGGC
AAACGTTTCAAATATAAACAACCAAACTGAATTTCCTTTGGAAGAATTCA
TCCAATCTGCGTTTACGTACCCTGTGAATTTTACCGGAGACTTCATGGAA
ATAGCGAAAGAGACTTTTCTATGCGGCTCCGATTGTTGTGATTGTGAACC
AGACTGTTTCAGAAAACAAAGTTGCTGTATTGACAAATTATGGAACACTT
CGAACCCAATTCCCTTATCAGAATACATGAAAAACTTTAAAAAAGAGGTT
GACAAGACTCTGCCCCTGCAATGTAAATTCTTCGAACCATTCGGTAGTTT
ACCAATATTTAAACAGATGACTATAGCTAAACCAGATAGTAGATTGGAAT
ATTTCTTGGTCAATTCTTGCCCGCCAGACTCTTCATACGCGACAGAATGT
ATAAAGGACGAAAGTTTACCAGATATTGAAAGACTACCAGTTATCGATAA
ACGATTCTATATCTTCAAGAACAAGTATTGCGCAATGTGTAATAATGTTG
AAAGTTTCGTTAACTTGAACTTGACTGTAAAATGCACCACGCCAGTAATT
ACTGGACAACCAACTGTAATTATAACCGCACCGCCTAACCCGCCCTTCAC
CAATCCATCTGTACTGCCAAAGGAAACATTCACTGTTCCTACCCTCCCGC
CCAATCCAGGATTCACTGTTCCACCCCTTCCGCCACTACCAGGATTCACT
GTTCCACCACTCCCGCCAAAGCCAGAAGTTACTGTTTCAACCCTCCCGCC
CAATCCAGAATTTACTGTTCCAACCCTTCCGCCACACCCAGGAGTTACAG
ATCAACCCCTCCCGCCACAACCCGAAATCACTTCACGGCCAACCCTTTCA
CAACCAGAACCAGAACACACTGGTCCGCCCCTCTCGCCTAATCCCGAATT
TACTATTCCACCCCTCCCGTCACACCCAACCGAACCAGAGGTCAAAGCTA
AAGATTTAATGAATGAATTCCAAGAATGTTTGGTACAAGTCAATCCAAAC
CCTCAACAAGCACCTCATAACCGTATGGACAAACTCAAATGCAACGCTCG
CAAAGTACTAAAACGAAGATGCCAAGACCCAAATTCTTATTGTCATTTAT
ATAAAAGTTCCATTGCAGGTTACCAGAACCTCCATTGTCATCAATGCAAT
GGAGAGTTGTTTACGGAGAGCATTCTTCAGAACCAGTGTGTTGCCTTACC
TGACGAACATATTATATGGTCAATTCACTTAAGCTTCACGCGGACGTCCA
CAAGACTGACATTGGATACACAGGATGAAAATGTCGGTGAACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:1097998..1103625 - |
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