MSTRG.1384.2.p1 (mRNA) -

Overview
NameMSTRG.1384.2.p1
Unique NameMSTRG.1384.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000006_pilon:2632449..2639160-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1384.2.p1 ID=MSTRG.1384.2.p1|Name=MSTRG.1384.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6712bp|location=Sequence derived from alignment at sc0000006_pilon:2632449..2639160- (Clytia hemisphaerica_ch_hm2_pilon)
CCTATATGTGGTCTACAGACTGTCAAAAAAGTTTCGACAAAAAGTAAAAC
TTCATAAAAAACCACTCCTTTACACATAGACATTTATTCCTGAAAATCAT
TACACAAGTAAAAGCTAACAAAACGACATTGATTTTAATTGAATTGCTTT
GGTACGGTAAAATTTACAGTAAAAAAAGATCAATCATCGTATAGTATACT
TTATTGGTGGTGATTTTGAGTTCAAAATGACAGGGCTGTTTGGAAAGATT
TTGATCCTGCTTTGTTGTATGGTGACGATTGCAGAATCGATTTCTTACAA
AAGTTATTACGCGAAGAAACTAAGAAAGGTTTGTACGGTACACGCTTTTT
GTAAGAGGCCCCCAGCCCAGTGGTTTTCGTGATGACGCGATTGGCTTTTT
TTCAAGTTTGTGATTTTGTGTTTTAAGATTTTGAAGTGCACGATTGCGTG
ATCGGAGGAACTAACGTGATCAACGTGATCGTGATAAAAAGGAAATTCAA
CTCGTGATAACGTGATTTGGATTTCTTTTTGCGTGCTGGCGTGATTTGAA
AGGTGACTGGGGGGCTCTTATAAGGAACCTTAACTTGGCTTCGAGCTTAG
AGTTCCTTATTTTTTTCAAAGAATTTCAGCCTCGAAGTTCCTTATCGAGT
ATTCGACTGAATAGACCTTTTCATAAATTACGTCACGAACATCACTTGCC
TCGTATTCAAACAATTACCATGGTGATTATGTCCCTTGAGACATTAAATA
ATTTTTTTACAAATAGAAAGTAGTTTTAATAAATCCGTTGAGAGTTAATC
ACCATGGCAATAATTTCAAAACGAGGCAAGTGATGTTCATGACGTAATTT
ATGAAAAGGTCAATTCTTCATTTTTGGGACCATTTTCAGCCTCAAGTTCC
TTATAAACGTGTTCCTTATAAAAAAAAAAGAATATACTATCAGAGGAGCA
GGTCATAGTACCAAGAAATGTATTTTCTTTAAGCCTACGGCAAACCAGCA
TAAGGCTCAATATACTAAAACTTCATTGTGAACTTGATTAAGAATGGGCT
CTTCCAGAAAAAAATTAATATCGCATTTACACGGTTTTTGCTTAAAAATG
CCTTAGCAACGCTTAAATAGAGCTTTTTAAGCGTAACTCTACCAAGTATT
ACTCTGCCTTTCATGTGGTACAATAGAGTCTCTATAACTCGAAAATATAC
AGAGAAAAAAGACTGTGCTAGATGATAGGACCAGAAAATTTGTTTGACTT
CGAAGTTATGAAGACTCTTTTGTATCAGCAATACACTCGTTGTAATGTAG
TGATCTATAGTTTCTTAGCATTATTTCAAATTTCACATTATTATTTTCAA
AACGGAATCTCAATTTGACAATGTATTGAAATTTCAATCTAAGTTTAAAA
ATCACAATGAAAAAAACTTTATCAAATATACGGGAGGGGTACTCATTCTA
GACCACAAAATTGTACTTAAAAACCGTAAAAAGTAGTATTGGGTATCATC
TTCTACTTGTCAGCCACATGGTCCAACCCCCTTGTATACCACATGATTCA
AAAGGAATTATTTTGATTCAATATACACCGAGTTATATGCTGAATGGACC
TACCTACCTGTAAGCTAATGTAATAAGAAAATAGAAAAGTTGGCAACGAT
AGTATTAAAAAAATGCTAATTATGAAATCAGAAAAAGACACCGAGCCAAA
CCCGTGAAATGCTCATTTTGCCTAAAATACAAAAATCTGATTTTTTCGGC
CAAAAAAAAATTTCGGAAAAAACGGCTTCATCCGCTCGTTAAAGAACCTT
GCTTGCCCTCTGTCTTTATGGAAAAAATCAGAAAAAACTAGCTTCATCAA
TTTCACAAGTCCAAAAAAACCCAATTTTAGGCACTTTTTGGCCCAAATTT
ACCAAATAAACTATTTTTTCGAATACCGCGCTGCATCAGATTTTAAACAT
TACCATTGTCCATCATTGCGCAAAAAATCAGAAAAAATACCAAGTACATC
GTGAGAAATTTTCCAAAAATGACAAAAGGGAATGTCCCTAAATAAAAAAA
TCTAATGAAAGCCCTATTTTAGGCAAATTTTACCAAAAAACCTTTTTCTC
AAAGACGAGCATCGTCACATTTTGGGTATTGCAATTTTGCATCATTGTGC
AAAAAATCAGAAAAAAATTAATGAGTGGATCGCGAGAAAAGCTGGTAACA
GACGAACGGACGGACATGGGTTAATTTATAGAACCTTCCGAAAATTTTCC
AACTCTCGGACCTTATTAGGACCCCCCGTTTATTTTGCTCTGAATAGCCT
GATTTAGCCTATATTCACCTTATTTTTGGGTTTTCAGAAGAACAATTTCT
AACCCCCCCCCCGGCAATTAGGCCCCCGCTTATTAAAACTTCGAAAATTT
TCCACCCCCCCCCCCCTTTATTTGGAACCTAAGAGTACAATCATGATCGA
AATATATTGAGAATTAATCTTCTTTCCTCGTTTTTCGAAATTTGGAGTTC
GGGCGAGAAAGTTGAATTTGAGCCATCTCTCAAAATCAATCGGATATTTC
AATTTGGCTCGGGTTTATAGACCTCCAGGCTATATTATGAGCCTTATTGG
ACCTTTTTTGAACTTTTGGATCATCAGAAGTCTTAGGTCTCATGTTAAAA
CTCAGAGTAAAAACTCTACCCTTTCAACCTACTTTAGAACAGTTCCAAAT
CGATTGTGGTTTCAAAACTTCCCGGTGGATTTCCCTTTTTTTCTCAAATA
TTACGACCATGATTGTCTTTGAAAATGAAAAATGCCGATTTCTGCTCTGC
AGGGGATCCGAAATTACGAGAAAAGCCCAGAAAATTTGAAAAAAAACTTT
TTCCGACCATTTTGAAGCATTTTCACTAAGTCAAAATCAGTATTTTGTGA
AATATTTCACTTTTTGAAAAGATCACTTTTACCTCAAAATTAATCGGATA
TTTCAATTTGGCTCGGGTTTATAGACCTCCAGGCTATATTATGAGCCTTA
TTGGACCTTTTTTGAACTTTTGGATCATCAGAAGTCTTAAGTTTCATGTT
AAAACTCAGAGTTAAAACTCTACCCTTCCGACCTACTTTAGAGCAGTTAC
AAATCGATTGTGGTTTCAAAACTTCCCGGTGGGTTTCCCTTTTTTCTCAA
ATATTACGACCATGATTGTAGGTTCAATAATTTCTTTTTGAACCTCCAAA
TACACTATTAATTAACTATTCTTTTTGGGAAAATTCTACAGGTGGACAGA
CTAAAATCAATCAAATCGATCCAATTTAATCGACCCCTTGGAAAATCTCT
GGAAATTCCCAAAAAATCCGCTTGGAATAAAGTAAGTCTATTGATTCAAA
GATTAATAGAATGTTTAGAATATGATGAGCAGTCTGACCAAAGGGTCATC
CCTTTATCATGGAACCATCGAGACCCCTCTCATCCCCTCAACGCACTGAA
AAATGGACCAAAAGAGAGAAGAACGAAACAAACAGCCTTTTATAAGTCTT
ATCTAAGATCTAAGACAAGGGGTGTACAGGGAATATAAGAAATTTGAAAC
AAAATGGTGATAATCTAATATCGTATAACAAATTCTATTTTCAAATACAG
GGAAAAGAGGTAGTATGCTTACGAGATAAAGAATGTGACTTCAAACAAAC
ATGCAACATGTATTCCAAACGTTGTGAGCGTTGTAAAATACGCATGGAAA
TATGTCGACGAGATGCAAATTGCTGTAACAAAGATTTACAATGTGTTTAC
GGCCGATGTCGAGAGCCATTGAAAAGGCAGGGTGGAAAAGGACATATGTG
TGATACAGACAAGGATTGCAACCCACGTATGTGCTGCGCGAAAAACAATG
GTGTCAGTGTCTGCAAACCCGAATTGGAAAAATATCAATTATGCTCACTT
TCACCTGGTGGTATAAATCACTCCATTGATCACCATTGCCCATGCGCAGA
AGGACTCCACTGCAGGGCGGACTTGTAAGTACCTTTTTCTATTAAGGTAA
AACTATGTACTATGTACTACTTGCTTCTTTTCTCGATAATGATAGGAGCC
GTCCATATAGTACGTACGCACTAAGGGGAAGGGAGGTGGGATCTTCTCAA
AAGCGTATGCTTGCATACAGGGGCAGGGGAGGGAGAAATTTTTCATAGTC
TTTTTTCGCCTTTTTTGTCGACTTTTAAGCTTCTTATACGCATAAAGGAA
AAAGAAAAGGTTTCTTACTAAGATGAGTTTAACGTATAAAATAAAGGTCC
GAACCAAACAATTTGAATTCGAAATTTTCTTCAACCGAGGGGGGGGGGTG
AATGAAAAAGTACGCACTTACCAGGGGGTATAGCCATTTGCGTACGCTTG
CGTACAGGGAGAGGGGGTACTCGACTTTCGACATTTTAGTGCGTACGTAC
TATGTGGACGGCCCCATAGTAGAATGATTAGGATCTCTGCAGCTAAGATT
GGTCTACAGCAGAGACGCCCTGGAAGGATTTTTCAAACATCTAGAAGTCA
ATAATATAGCTTAGGGCTTTTTAAAAATAAGTGAAATAGAAAAGGGTTGA
TTAAACAAAGTGGTTCAAAATAATCAAGGTCCCTCCTTCAAAGTTTTCTC
CCTCGTTAATTTCACTCTTGATACCATACACTGCAATAAGCAAGTGTGTC
TTTTCTGGAGCAGATCCCTTGCCGTGATTTCTGTACCTAACTCAAGATAT
TGACCCTTAAAAACAGTGTTTTTAAGCCAGAAACAGCTGTTTTGTCCAGT
TTTTGCGCTTTTTGAGGCTCAATATCTCGAGTTAGGTACTGAAATCACCT
ATACGCGCAATTTTTTGAGAGCTTTTCAAAAATATACTATAGGTGTCTCT
TTTCTCAAGCTTAAATTTTCATCAATTTTTGACCCCATAATTTTTGCCTG
AGACCGTCATATTTGTCCGAAAATCACACAAAAGTGCCCGATAAAAAATT
GAAACTTAAGTAATTTTGATTCCCCTACCCGTTAGCTTCCCAAAAATATA
TATCAAGTGCTTTGACCAAAACAATCGAGCGATATAAAAAAAAACGAACA
AATTCCCCCCTACTAACAGTTCTACTGGTTAGGAATAAAAAGATATTCAG
GTTTTCAGGCTTTCAATAATGATTCTCACATTTTAGCTTTGGATTGTTCA
CACGATGCTTGAGAATTCGCTGATAACATGAAAGAGCTTGAATAAAGTTT
ATGGTAATAATGGAAAAAGAAAGACTTTTATAAAGATGGCAGACGACAGG
CTTAATTTTAATCAGATTTTGAAGAAGCAAAGATTGCTCATAAAAGCCAT
AACGAACAATGCGAACAATCTATATTAAAAGTTTATGTTTGACTTTCTGG
ACACTGAAGTTTGATGAAGAAGCAGTTTGTGATTTTTTATCTGGTTCAAC
CGGAAAGAAGACAAATTAATCGTAGCAGATTTTAAATAGCTGACATTTTA
TTCATCGTAAATCTCAATTAATGGAATATTATAGCCTTATGTTTGAAAAC
AACCTGGTAGACAATAGTATCAAATTTGGTCCACTGGGGGGGGGGTACTA
GGGTTGGCTGATGAGGGGTATGTGCGGACGGGACCTCTAAAAACCGACCC
TTAGAGAGACTGATTTTGAAGGTGAACCGATAGACTTTTTTGAAACATAG
TTCTTGAAAAAAAGAAATAACGCCAAGAATTACTTCGTTGGAGAGATAAC
TTTGGGCGGCCTGAAATAAGATTTTTCTACTGGATTAAAAACTTCTGTTA
TATACTTTGCCGAGCCTTTTCGAACATTCGGGGGGGGTATAACCATTGAG
TTTAAAGCCCGAAGGGATAGAGGTCAATCTCTAACCTTTCTCAGGCAAGA
AAAAGTGAAGCCGTAAAAAACGCGCCGCATTTTTGACGACAGTTTGAATC
TAGCAATTCCTTTGTTTATGATTGATATTTTTTTCGAAATTTAGCGGTAA
ATTTTAGTTTCAATCTGTCATTTGTGTAAAAACCAGGCGAGCCGCTCAAG
GCTGCGCAAATTTGGGTAGGATATGTTGGCTTCAAATCCTACCAAGGAGA
TTGACTTCTAGCCCTTCGGGCTTATACTTCATTGGGTATAACTAAAAGTA
ATAACTCGTTAAAAAGAAAATTCTAAGTTGCTTGATTTCTAAAAATTTGA
TAATGAAAAAGCAAAAAGATGAAGAAAAAAGTGAAGGTTTTTTATATGTA
CTCAAAAAAATTTTTTTATACACTTCTTCAAAATCTTAACCCCACTGGTT
TTAAATACCTACGTATTCAGATTTTCAGATTTCCTTTGAGCGAAGGGCTA
CAGTTATATTCCACTTGGAGGATTTTAAGCAATTCATCTTGACCTTTTCA
GGGTTCGTGATCCAAAAGTGATATAAAAATATCGGAATACATATTTGAAA
TCGGCGGGGTTAAAAATTTCGAAAAAATATATAAAAAAACCTTTACTTTT
ATCTTCTTTATTTTCCTTTGTAATTTTAAAATTTTTAGAAAATTGCAAAA
ACCCTCACATCAAGTCACTTAAAATTATCTTTACAACGAGAGTTTGAAAT
TATTTGTAAATCATATATATGATTTAAGAAATTTTCTTCAAGATCAATAA
AAACTTATTTTGTAAAGTATCTTTTAATGGAGAAAAATTATTACTTTTTT
ACCAACTTTTTATTTTTGTTCACACTGGAAAAACTTCTTTCAATCGGCTG
AATATTTCAAAA

Coding sequence (CDS) from alignment at sc0000006_pilon:2632449..2639160-

>MSTRG.1384.2.p1 ID=MSTRG.1384.2.p1|Name=MSTRG.1384.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2412bp|location=Sequence derived from alignment at sc0000006_pilon:2632449..2639160- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTGGATTGTTCACACGATGCTTGAGAATTCGCTGAGGAAAAGAGGTAG
TATGCTTACGAGATAAAGAATGTGACTTCAAACAAACATGCAACATGTAT
TCCAAACGTTGTGAGCGTTGTAAAATACGCATGGAAATATGTCGACGAGA
TGCAAATTGCTGTAACAAAGATTTACAATGTGTTTACGGCCGATGTCGAG
AGCCATTGAAAAGGCAGGGTGGAAAAGGACATATGTGTGATACAGACAAG
GATTGCAACCCACGTATGTGCTGCGCGAAAAACAATGGTGTCAGTGTCTG
CAAACCCGAATTGGAAAAATATCAATTATGCTCACTTTCACCTGGTGGTA
TAAATCACTCCATTGATCACCATTGCCCATGCGCAGAAGGACTCCACTGC
AGGGCGGACTTGTGGACAGACTAAAATCAATCAAATCGATCCAATTTAAT
CGACCCCTTGGAAAATCTCTGGAAATTCCCAAAAAATCCGCTTGGAATAA
AATGACAGGGCTGTTTGGAAAGATTTTGATCCTGCTTTGTTGTATGGTGA
CGATTGCAGAATCGATTTCTTACAAAAGTTATTACGCGAAGAAACTAAGA
AAGCTTTGGATTGTTCACACGATGCTTGAGAATTCGCTGAGGAAAAGAGG
TAGTATGCTTACGAGATAAAGAATGTGACTTCAAACAAACATGCAACATG
TATTCCAAACGTTGTGAGCGTTGTAAAATACGCATGGAAATATGTCGACG
AGATGCAAATTGCTGTAACAAAGATTTACAATGTGTTTACGGCCGATGTC
GAGAGCCATTGAAAAGGCAGGGTGGAAAAGGACATATGTGTGATACAGAC
AAGGATTGCAACCCACGTATGTGCTGCGCGAAAAACAATGGTGTCAGTGT
CTGCAAACCCGAATTGGAAAAATATCAATTATGCTCACTTTCACCTGGTG
GTATAAATCACTCCATTGATCACCATTGCCCATGCGCAGAAGGACTCCAC
TGCAGGGCGGACTTGTGGACAGACTAAAATCAATCAAATCGATCCAATTT
AATCGACCCCTTGGAAAATCTCTGGAAATTCCCAAAAAATCCGCTTGGAA
TAAAATGACAGGGCTGTTTGGAAAGATTTTGATCCTGCTTTGTTGTATGG
TGACGATTGCAGAATCGATTTCTTACAAAAGTTATTACGCGAAGAAACTA
AGAAAGCTTTGGATTGTTCACACGATGCTTGAGAATTCGCTGAGGAAAAG
AGGTAGTATGCTTACGAGATAAAGAATGTGACTTCAAACAAACATGCAAC
ATGTATTCCAAACGTTGTGAGCGTTGTAAAATACGCATGGAAATATGTCG
ACGAGATGCAAATTGCTGTAACAAAGATTTACAATGTGTTTACGGCCGAT
GTCGAGAGCCATTGAAAAGGCAGGGTGGAAAAGGACATATGTGTGATACA
GACAAGGATTGCAACCCACGTATGTGCTGCGCGAAAAACAATGGTGTCAG
TGTCTGCAAACCCGAATTGGAAAAATATCAATTATGCTCACTTTCACCTG
GTGGTATAAATCACTCCATTGATCACCATTGCCCATGCGCAGAAGGACTC
CACTGCAGGGCGGACTTGTGGACAGACTAAAATCAATCAAATCGATCCAA
TTTAATCGACCCCTTGGAAAATCTCTGGAAATTCCCAAAAAATCCGCTTG
GAATAAAATGACAGGGCTGTTTGGAAAGATTTTGATCCTGCTTTGTTGTA
TGGTGACGATTGCAGAATCGATTTCTTACAAAAGTTATTACGCGAAGAAA
CTAAGAAAGCTTTGGATTGTTCACACGATGCTTGAGAATTCGCTGAGGAA
AAGAGGTAGTATGCTTACGAGATAAAGAATGTGACTTCAAACAAACATGC
AACATGTATTCCAAACGTTGTGAGCGTTGTAAAATACGCATGGAAATATG
TCGACGAGATGCAAATTGCTGTAACAAAGATTTACAATGTGTTTACGGCC
GATGTCGAGAGCCATTGAAAAGGCAGGGTGGAAAAGGACATATGTGTGAT
ACAGACAAGGATTGCAACCCACGTATGTGCTGCGCGAAAAACAATGGTGT
CAGTGTCTGCAAACCCGAATTGGAAAAATATCAATTATGCTCACTTTCAC
CTGGTGGTATAAATCACTCCATTGATCACCATTGCCCATGCGCAGAAGGA
CTCCACTGCAGGGCGGACTTGTGGACAGACTAAAATCAATCAAATCGATC
CAATTTAATCGACCCCTTGGAAAATCTCTGGAAATTCCCAAAAAATCCGC
TTGGAATAAAATGACAGGGCTGTTTGGAAAGATTTTGATCCTGCTTTGTT
GTATGGTGACGATTGCAGAATCGATTTCTTACAAAAGTTATTACGCGAAG
AAACTAAGAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1384MSTRG.1384Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1384.2.p1MSTRG.1384.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1384.2.p1.exon4MSTRG.1384.2.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1384.2.p1.exon3MSTRG.1384.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1384.2.p1.exon2MSTRG.1384.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1384.2.p1.exon1MSTRG.1384.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000006_pilongenomesc0000006_pilon:2632449..2639160 -