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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000109_pilon:211509..215626+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13603.1.p3 ID=MSTRG.13603.1.p3|Name=MSTRG.13603.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4118bp|location=Sequence derived from alignment at sc0000109_pilon:211509..215626+ (Clytia hemisphaerica_ch_hm2_pilon)
TTATAATTAACACTAGTCTATCTACAGAGAGCGAAGCTTAAGCATAAAAA
ATTATAGGAGACACTTGCGAGATTCGATTTATGTGATAGAAACTTTGGGG
CATTATCATCCCTTCAGATTTCTACGCATTTTCAGCAGTTACGATATTTT
CTCTTTTGCCCTTCCAATTaaaaaaaGAGTTGACACATAAAACAAACACT
TCGTACAGTATCgggtttatttactttttaaagGAATATGTGCTTATGGT
AGACGGAGAGAGATGTAAGAGGTTAATCTTTCAGCACTTTTGGAATACCC
TCTGGGAAAACCctttaatgttttcaaatatAGCTACTCATGATATAAAG
AGGTTGCATGATATTCACTACGTATTTTCATATGTGTATTAAAGTAGATG
GTCGAGAAAACAAGAATTTTCATCATATTCCAGTTTCAAGGTAATGCTAC
TATTcttgtttctgatttttcatCCTTCAATTCcttcaaaaaagttgttc
agaatgggcttttccagttAAAATCCGTACCCCCACGTTGAGGATatcca
ttttcaaaattgttaaacCCTGGGATGTCGAAGCCCTATTTTTCTCCAAC
CCCTTGGAtttccgatatcctcaacatggGGGATACAGAGTTCAtatgga
aaagcccattatggcggctaaatacaaaaaaattctcaatagcctgtacc
aaactcttctacGCGATTATATCACCAGTTTGTCCAAGAAATATTCGGGT
GTACCTTGGCCTTTTAGTGCCCTCCaaaaaaaTGCTGCTGGGGAACAAAG
TTCAATATCACGACTTTAAGAGAATTTTATTCCTCTTTGGCTGAAAAGAT
CAATACTATGGTGGCATGGGGTTCGAAATTGAATAAAGCTATAACAAGTT
TCAAAACCTTTCTTCAATCTACAGGATCTTCACTGCAAGAAATCTATGTC
TCACAGAACAAAGCAAGTCGAGATGTTAATACATGCGGCATACCAACACA
ACCGTGTCGAACTATTCCGTACGCAATCACAAAATCCAATCCTTCAGATA
CCATCTTTCTTGACGCTGATTGCACATTCGTTCAAAACAAAGCCCTTTTT
ATTGATACACAATTGACTTTAGGCTCGTATGGAGGGCGGGATCTCCATCG
CAAGAATGCTGTCATCATGTTCTCCCAATCATTCCATAGTAATACCTTTC
TCTTTCACTTTAATGGAAACGTGACAATGAACAATTTAACCGTTGTTTAT
AATTCTACCTGGCAGCACTTGGCTGTTATCTTTGACTTGGGAGACGGAGT
TGTCCTTAAAGTAAATGATTGTATTTTAAACCTTTTAACTGATCCGAAAT
TGACGAATTTGGTGTACGATGTGAATCAGTTTTCAtctattttattttac
aaaacgACTTTTGATGGCTTTGGAAGCCAAAAGCACCTCGCCAAAACTTA
CAGTGGACACCACCAAATATCTCGTACGAATTCAAAAAAGTATTCTGAaa
ccattttcgatttttgttcCTTCAAAAGTTCTATCATCTCCCTAAATCCA
AGGATTTTTTCCGTCTAAAAGAAACCAAAGGAGCATTCAAAAAAGACATC
CCTGACAGTTCCAGGCCAAAGTTTATCGATCACAAATTCCATATTTGAAA
TGACAGAGGTCACCGTTTATGATTTTGTTACTATCACACTCGATAACAAT
CGCTTTAAACGTTCACCTGTTACAATCGTTAAAGCTTTGAATTACAAATC
TCACCTAGTCAAAGTTACAAAttgtcattttcaaaaatcatattacaaga
atttcaacaaaatatacCCTTACCTTTTAAAAATTTGGAATCAAGGAAGT
ATTCTTGTCGATAATTGCACATTTGAAGGGGCTACATACGGTGCGTTAGG
TATACAAGATTTGAATGACTTAACTTCTACCTTGAAGGAAATAACATACC
TACTGACCGTGCCGCAGGATTAACAATGCTGAGTGGTGGATTTATGAACT
TTGTTATTTCAAATTGCTCCTTCATGAACAATTCAGCTGTCTCTGGTCAA
ATTGGTTCAATCAAAGTTAAAGCAAGCACGTTGCATTTCGATGCGTCATT
AAAAGTTTCGAACACTACCATCAATTTGGGTGCCCACCATTCATCATTGA
TTGGCACAAGTGTCTTATTTGAGACATATGATTATCAAAGTAACGTACCG
TGGTTTTCTATGGATGAAGCTTCAAAGATATCATGCCCAATTGACAAGAC
GATTCGGCACCATTATACTCCAAAGCAATATCTGCGACTAGATTGTATCA
GTTGTAACAGCTCATCATACAACGTGATTGACAGAGCTTTCATACGCGTT
AATAACTCTGAAAAGCAGTCGTTGGAAGAATATGATATTACATGTCATAG
TTGCCCTTACCAAGCCTCTTTCAAAGATGGTGCTATTCGGAGTAAAGGCA
ATTACTGGGGATTATCTGACAATTTTGGTGAAGTAACCTTTTACCCTTGT
CCTCCCTTATATTGTTGCTCGTCCTTAGAAACGTGTGAGTCGTACAACAC
TTGCACTGAGAATCGTGTTGGAAGACTATGTGGCGATTGCCAAAAAGGAC
ATTTTCTATCATTTTCAGTCATAACCAATGTCTTGATAAATCGTTTTGTC
AGTATTCATGGACTGTTTGGTTTGGTTATGTCTTTTTGGCTGCTCtcatt
tgttcattttttttgttcaacAAAGACGTTTGGAACCGCATAAAGAATGG
AAAGGGAAGCATCAATAGTGAGTCATTTGAAACAGAAGAATTTCTTTCGG
ATACTGATACCACTAACGAACTTCTGATTTCACATTCTCCGTTTCACAAG
AAATCACCACAGTCCTACCAATTACCGggatttataaaaatcactttctt
tttttACCAAACGGCTTCGATCATTCGAGTTGTCGCGTCAGCAAAAACTT
ACTATCACATGCCAACCATTGTCAGTTTTTTCTTTACGTTCTTCAACATC
AAATTGGACTTCAATacaattttcatcaaagtttgTCCTTTGTGTACAAA
TAGTATGGTTATTATGGATGCATTGAAATCTAGTTTATCGTTAGCATGCT
TGATAATGCTTACGCTGGCAATAATTGTTTGTGGTCTGCTCAAATGCTTA
TTGAAGAGGAAGTGCGAGTCATTCTTACGTCGATTGAAAGGAGCGTATGT
TAATGTTTTGCTGCTCAGTTACTCAAACATTTCTGTGTTTTGTTTACGAA
ATATCCATTGTGTAGAGATCGCTGGTGAATCATATTTACACGTTCAAGCT
TCCATCAAATGTTATACTGATTGGCAATATCTTATCATGGCCGTGATTGC
TTTATGGGTGGTTCCTTTCCCTTTAGTGTTATACACTGGTTGCCGGACCC
TTCGGTCTTATCGCATCTCACCGAACGAGTTTCTTATGATTCTTACTATA
CCGcccttatcattgtttttcttggTCATCCGCCCTTTGGCGTTCACCCA
ATACCATTTCGTTTTCGACCAAGCCACCCTTGAAGAAAAGGATCAAATAT
TAGGTGTGTTGAACGGACCTTTcaagttgaatttcaaaaatcaagaatca
cATCTCGTCTGGGAACCTGTTTTGATTTTACGCCGTTTGTTACTGATCGT
CACGACAACCTTTATTTCGTCACCAATCATCAAACTTTATCCCGTGGGTT
TGCTTTTCTTCAGTTTTGCCGTGCATGATTTTGTACAAAATCCATTTGac
aatcaaaaattaaatttcattcaaaatgtaTCAATGGCCTTATTGTGTCT
TTTGACCCTATTTAATACTTTCTGGGCGGTTACTAACAGTGTGGATTTGC
TTCAAGACAGAATTGATCACATCCTTGGTGAAATATTGTTGGCTTGTGAA
GCGTTTattttatgcttccctattgtttgcatggtaatttatttgattta
taagtttattttaattttttgctttaGAAACAAGAAATAATTGAATTTCA
CCCCCAGTTTACTCCCTTTAGATCTTTTTGAATGAAGTCTCATGTCAAAG
AAAGGTTTCAAAGATTGATTCATGTTAAATTCAGTAcaccctttttttga
aaatgatttggcTAGAAG Coding sequence (CDS) from alignment at sc0000109_pilon:211509..215626+ >MSTRG.13603.1.p3 ID=MSTRG.13603.1.p3|Name=MSTRG.13603.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1374bp|location=Sequence derived from alignment at sc0000109_pilon:211509..215626+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCGAGAAAACAAGAATTTTCATCATATTCCAGTTTCAAGGATCTTC
ACTGCAAGAAATCTATGTCTCACAGAACAAAGCAAGTCGAGATGTTAATA
CATGCGGCATACCAACACAACCGTGTCGAACTATTCCGTACGCAATCACA
AAATCCAATCCTTCAGATACCATCTTTCTTGACGCTGATTGCACATTCGT
TCAAAACAAAGCCCTTTTTATTGATACACAATTGACTTTAGGCTCGTATG
GAGGGCGGGATCTCCATCGCAAGAATGCTGTCATCATGTTCTCCCAATCA
TTCCATAGTAATACCTTTCTCTTTCACTTTAATGGAAACGTGACAATGAA
CAATTTAACCGTTGTTTATAATTCTACCTGGCAGCACTTGGCTGTTATCT
TTGACTTGGGAGACGGAGTTGTCCTTAAAGTAAATGATTGTATTTTAAAC
CTTTTAACTGATCCGAAATTGACGAATTTGGTGTACGATGTGAATCAGTT
TTCAtctattttattttacaaaacgACTTTTGATGGCTTTGGAAGCCAAA
AGCACCTCGCCAAAACTTACAGTGGACACCACCAAATATCTCGTACGAAT
TCAAAAAAGTATTCTGAaaccattttcgatttttgttcCTTCAAAAGTTC
TATCATCTCCCTAAATCCAAGGATTTTTTCCGTCTAAATGGTCGAGAAAA
CAAGAATTTTCATCATATTCCAGTTTCAAGGATCTTCACTGCAAGAAATC
TATGTCTCACAGAACAAAGCAAGTCGAGATGTTAATACATGCGGCATACC
AACACAACCGTGTCGAACTATTCCGTACGCAATCACAAAATCCAATCCTT
CAGATACCATCTTTCTTGACGCTGATTGCACATTCGTTCAAAACAAAGCC
CTTTTTATTGATACACAATTGACTTTAGGCTCGTATGGAGGGCGGGATCT
CCATCGCAAGAATGCTGTCATCATGTTCTCCCAATCATTCCATAGTAATA
CCTTTCTCTTTCACTTTAATGGAAACGTGACAATGAACAATTTAACCGTT
GTTTATAATTCTACCTGGCAGCACTTGGCTGTTATCTTTGACTTGGGAGA
CGGAGTTGTCCTTAAAGTAAATGATTGTATTTTAAACCTTTTAACTGATC
CGAAATTGACGAATTTGGTGTACGATGTGAATCAGTTTTCAtctatttta
ttttacaaaacgACTTTTGATGGCTTTGGAAGCCAAAAGCACCTCGCCAA
AACTTACAGTGGACACCACCAAATATCTCGTACGAATTCAAAAAAGTATT
CTGAaaccattttcgatttttgttcCTTCAAAAGTTCTATCATCTCCCTA
AATCCAAGGATTTTTTCCGTCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109_pilon | genome | sc0000109_pilon:211509..215626 + |
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