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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000108_pilon:1027376..1036987+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13578.17.p1 ID=MSTRG.13578.17.p1|Name=MSTRG.13578.17.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9612bp|location=Sequence derived from alignment at sc0000108_pilon:1027376..1036987+ (Clytia hemisphaerica_ch_hm2_pilon)
ctttataaaaactttgacaTCGCTCAAAAAAGCTGACATGttgattttca
ttattttttttatctagaaTTGTCCACAGTGATGGATTCGAAATTGACAT
TGAAAGCTGACAAATTCCAAATTGATGGTATTTATCTTGTtgtatttttc
aatcttttctaTTTCTCATCTTTTGAGATGGGGCCCATTCGATGAAAAAT
GTTCTGAGTGTTCCGAGACCTTTACCTATGATTAGTCTTCACAAAgtttg
ttttattcttttaaagGAATGTTGCTGAATAAAAAggctttttctgataa
atataatttttttaacaaacttgagCAACAAAGTTGACCAACTATCAATG
GAATCAAAATCTATAAAGGGTAAAGCTTTAGgtatgatttttattttctc
tacCCATGCTCAAACCTGAATTTATTCAAAGAAACTTTATTGGAgttacc
ccggtggggtggaggtcctataaattaacctgtgttcgtccgttcgtctg
ttattaaattttctcaggattgaatcataggaagcTTTTGAGTTTTGgta
caaagatgcaaaatggtgatggccaaaatgtgacggagcccgattttcga
aaaaaatttgggccaaaaaacggctaaaaaactttgtgaaaaattggatc
attaatttcttctgattttttgcatgaaagcagggtaccatcataggtaa
ataATGGCTctagcagatttttgcaaaaggATTTTATTGGCTaaaaaaaG
GCATGTTTATctttaagaatcactattaataagcatacatcaatgttctt
agtcaaatcactcaatttttttatgagatagatgttttttttgctcacga
agtcttgaatatgaaagaatatttcaagagcatgaaattttggtttctaa
atgttttattctataagaaacaaacgactaattttaatagatcgtcacta
tttgtgttctgaatgattgtttaatggtcacgtcacgtagacatcaatta
taaatgtgttaaatgcataaccgggtaggtccataaaagtatcacttgtt
tgttATTTGTTATCCTTGTTTTGTATTCCTTCTAGATACAACAAAGACAC
ATTGGAACTTGCCAGAGCCTGTTTCCATCTTCTTTGGACGAGAAAGTTTC
ATTGAATCCattaacttgaaatttcatcACAATCAAGCAGTTGCTTTGAG
TGAAATGGGAGGTGTGGGGAAAACACAAATTGCTGCAAAGTTCGTTCAAA
TACACAAAGATGAATATCGGAAGATATTTTGGATTTCTGCTCTCAGCCTC
AAGAGATCTCTGAACGAGATTTTGTGTGCATTTGGTTGTAAACAACTAAT
ACCTGATGAAccttcgatggaaactctcactttcgttttccacTCTAAGA
TTTGTGAAAGCTCCAAAAGATCGCTGGTTGTATTGGATGACGTCACTGAG
GTCACAAAAGACGTCACTTCATTCATTGGAAgtgtgaaagaaaaaatcag
ctTATTGTTGACATCTCAATTGAGGGATTGGGAAGATTATGGTTTGATTC
AAATTGCTGTTCCATGTTTCCATGAACAAGAATCCATTGGCTTCTTACAG
AATGAACTTACTACAGCCAGCCATCAAGAAATCTCCATTTTAGCGAATCG
TTTACAATCATTACCTTTAGCCCTTCACCAAGCCATTTGTTACATCAAAA
AACATAAAGTTCCTCTACACAAATACATCGAACAATTTGAAGCAtgcaga
aaaagtgttttgggAATGAAAATCAATTCCTTTACTGAATATGACAAAAC
ATTGTTGACAGTTTGGGATATGGCTTTTGCGAAGATTCGGGTCGAATCGA
AGAATGCTCTTTTGATCTTGGGAATGATAGCTTTCATGGACAAtcgaaaa
atcaacaaaaagacattcttttattttgataaagttgACGAATTTGAATT
AAATGAAATCATCTCACTTCTTGGTCAATATTCATTGGTCGGCGAGCGGA
ACGAATGTTTAGAAATTCACAGTCTTGTGCAAAAAGTTATCTGATATCGT
ATTGAACAAAAACAATTTGTTGAGGATGAATGTCCGTTGATACTGCTTGA
AAGtcttcttttgaaaatcgaGGTTTCTATTAAAGATTTGGTTGCAAATG
ATGACTACGAGGATTTATGGTACATTCATGTTTTTCGTTTGATCATGAGT
GGTGCACTCAAAACTATCAACTTTGATGTTTCCCTTGTATTATATATCGC
CGTAGGCAGAATGGAGATGGAAAACTTATACCTACTTGCTGAacttcttt
caaaagttttgttaaAACAATATCGGTTGTTTCGAGATGTGGAAACTTTT
CACAACCTGTTGCTTGTTCATCGTTGTTTCATATACGCGTCAAGTCAATT
AGGTTTACTTAATGTATGAACgagatttttgcttttgaaaaagAGTTTTC
CTCAGAGCTTGAAGAAAATTCTGAAGAAGTTTACCAGTGGAAGCTACAGC
AAGCTGAGGCATATAATATACATGGACTAATGTCGTTATACGAAGATATc
gttcaaaatttattcaatgaACTGATCAAGAAGAAAGGATTTGATAACAT
TAAATTAAGATTGGCAAGGCATCTCAATGTAAGGGATGTTGAAGTTTTGT
TGAATTCCGTTGACACAAATAATCTCAGTGACGCTGACTTGTTGGTTTAT
TATGATGCAAAATGTTCTTTATATATCAAGAACGGTTGCTTTGATTTCGC
TGAACAAGTCATGAAGGATTGGAAAGAACACATACACATAAAACAATATT
CTTGATTGTGGCACTTTAACTTGACACAAAGGAATTGCTTTTTACTTTAC
AAGAAAGGAAATTACAACGAAGCACTTCTTGCATGCGATGAAATTAAACG
AGACATTGTCTTTACTAATGCAAATGTTTTCATTTGGGAAGCAttgattt
tgatcaaattagGAAAGTTCAACAATGCAGAAGTGTTACTTGATGACCTT
GACCAACACAATAAGATTACCATTGAAATCAGTTCATACCTGAAATTTCG
AAAGCATGACTTTGAAGCAGTAGAAAATCTCCTAACCGATGGGGAAGATG
AGCGTCagtcaaatcttttgttttcggTAAAGGAATATGCGAAACTGCAT
CGACAACTCAAAactaataaaccagctgcgctggaagctccggctttaga
gattaaaagatgtgaaagatgagcttgttgagttagttgtgttcgaacgt
tgcccacaaactactaatcagaacagatcagaaagcaaagcaataaatct
attgcagagcgagtatgagaaataatcttaacgaattgtacgaataaata
aaccagctggaagtttagctcttctaagtgattacacatgcactttcttg
cttaAATAACCAAGCCcatcccccgcccactcatcctcaactaaaaagtt
caaaattggagctaaaggagataaacatttagaagtcaatatttccaagt
tcttataaatttatttttttctaaacttgccaatagcgaagccatgatgc
gccattgatttgattgtccgcaTAAAATTTagttaatgggataaactttc
gcgggtggcaatattttcaaaattttgtgacTTAACTGTCAAATTGTGca
ttttggttgttgaaatacacattattagcacttctttgatgccagtaaac
attcaaaaagtatttgtttgacaaattttgagttttgtttagaaatattt
cgcgaatgaggcctttccaaatttccattgagacttaattttgcggatga
cacccaacTCCGCGAAAtcagcgaaatttaatccccgcgaaagtttatcc
cattaagccacgggtttttagctaagcattattttttctgctgggataat
acttggagaagagtaggataaaccaaattaAATGgtcaatagtgtgtatg
taataaatagtgttatatttggaaaaaaacctgtttcgggtttgaaaaat
gttcaaaaggaaCGGACGCCCCAGctaatgaaattacgacaaagtccaaa
aaatatcattttcagttataacactgtgaaaatttctccgatcttgttca
aatttacacaggaattgtgttttagtatcctttactgaattctcatagtg
atatgtttgtaaaaaatctgtgtcgggtttgaaaaatcaaaaggaacggt
cgccagccgcgacgaaattacgacaaaatccaaaatgatcattttcagcc
ataatactgtgaaaatttctccgatcttgttcaaatttacacaggaattg
tgttttagtatcctttactgaattctcatagtgatatgtttgtaaaaaat
ctgtgtcgggtttgaaaagtCAAAAGGAACGGACGCCagcagccgcgatg
aaattacaacaaagtccaaaaatgataattttcagccaaaacactgtctg
actgtgaaaatttctccaatcttgttaaaatttacacaggaactgtgttt
cagtatcctttattgaattctcatagtgatatgtttgtaaaaaatctgtg
tcgggtttgaaaaatcaaaaggaacggtcgccagctgatgatgaatacga
caataacaaagtccaaaacaggatcattttcagccatacataacaccaca
aaaaatactgtgtatcaatggctgtgtgtttgaaagtttcattgtcaagt
ttgaaaatccaaaagggaCAACCACCAATTAGATATCATCAcatcatgaa
aaatgaccaaaagtccaaaatagatcatttttacagcataaaatcaTGAG
AAACACGCGTATTTGAATTCAGTATACAGTACAACGTACAACGcaccatc
aaacttctcataaatcgtgtccaaaacatcatgaataaggatgaaaatga
tcaatttttcactgagatttgccagtatttgctacacagtcagctaAAGT
CCACTTTCgatagccatctttttctaaatacttttcgaccaatcaaatca
caatattatcggaatcagtgatccgtttttgttaaatcggaatagatcat
cggattagataaacaaacaaaaaatgtcttgacccttgtcggaagagaga
attaaaggctcctaggccggagcaataaaTCGAAAGAATTGGTTGAACAA
TGTCTGCAAATGAAGAAAAGTATAACTAAGTTCTTTCAAGTAGATTTAAA
TTCGATTCGTTTTTGAAATGCAATTTTATCAAATTGTGATTAGAATCGCA
TGTTTGGGAATTACTCCAacttttggctaaaatttttaACTGACTGCAAT
GTAATTGTTGTATTGACTTGGCCTGGAAAAGCAGAAATGgaagtgttttt
attttaactaTGAAAATATTCTAAGGAGTGGTTTCAGGGGGTACTGGATT
CCGCCATTCGGTCTAAATTTTGTCCAATTTCTGTCACACCGTGAAGATCA
AGTCTGAAATTCTACCAAcgaaaattttcaatgaaattgattcttttctc
caaaatttcGAATGATTATTTGCCAAACTCCATTTTTCAGACCAAAACAG
CCCAATTTCTCGTCTTCGACAGTTGACCTAAATTCTGCACATCCGTTCAA
ATTTCTATACGTCTTGAATTTTTGTGTTAAATTAGAGGATTAAATGTTAT
GAAATAGAATCATGGGTAGGCCAAATTTTTAGATGGCAACATTCCAAGGA
TATTTTGAACAAAGTCGATTGTTTGGGAGCAATTTTATCATTAATATATT
TTAGAttgcaaataaaaattttgtatattttttaaaacaaggtttaaatt
catgattttctttgtttcttagCTGGTGGCCCAGCATCACCATGATTTTC
TTCtcttaataagaatatttttgtaagaacaataaGGTCCCCAATGAGGC
GatcgaaaataagaacatttcaagaacagTTATatgccttaaatttcaaa
agtatgataaaaaagatcaaaacaaaaagcatctcgggggggggggcaag
tcGAGGTACAGTATGTGATGTGGTATTTACCGCCCTTAAGGATGCCTTTT
TGGAACCTGGCAGTGTCTGTAATGgttttaaaaatcagaaaatcaaatct
cAGTCCCATTAAGGGTCGAAAAATTTTACCcctaaaacatcaaaatatgg
tcaaattagtcccaataagggtcttaaaattcacaacattttctaatttt
ctctcttttaggAGGGTCCGAGAATCGAAAGCCTCGTGGCACCCCCGTCA
TCCTGTAGACTTAGTACTCCACCCTCCGTCCCGGGGAAAGCATATCGATT
GATAATATTTTGTACCTGTTAAGAACCGTCATAAAAGTGaacatactctt
aggtgccaaataaacgggcccccccgcttgttaatttttcgatttttttc
caacccccccggaccttattaggacccccccccgtttattaatttttgaa
aaaattcccaactacaaaaaggaaaattccttgttttactctaaaaagcc
taaatttagtctattttgaccctttttagggtttttaaaggtccattttc
caacctccccggtaattaggccccccccgtttatttaatttgaaaaattt
tcccatttattcgaacccccccccccccgtttatttggcacctaagagta
gtgTTAAGACAAagtgtttttgaaactttaataaattttttattccgAAT
AATGTAGTATATACATTAGTAGTATTTTATTTCACTGTCTATGATAACCT
TTTTACTAAACCTATTTTATTAAATGTTTCCCAAGATGACCAtatttttg
aaacttaaatGTCATAATTTTCCTTTAGAATCTTTGAAGTTTATAGCCCC
CTGAGTTAGCCttctaaaatgttttttgaaccGAAAGACGATCTCTGTTT
TTTCAGAATTACATTTGTtatgctttttatatttttcagcaaaaaacaaa
agattaagaaaataaaaagaaataaatgaagAGAATGAGATGAGTACACC
ATTGTACATCCTCCAAAGCGAGTATTGGGTTCGCATCAACCTCGCTTTGG
AGTATTGTATCAAAGAAGTGCTCATTGATGTACTTCACAACGTGCACAAT
GACACTTCTTATACTGGACTTCCAACTTGTCCAAAACAACTTCATCAAAT
ATTCGTGCGAGAGAGATGTACCATCCCACATGGGGAATTGGCCCAACCCC
AGGACAGCATTCACTATCTTGGGATAGGGAAATCATCGCGCTTATCAGAC
TCTGCCGATCCTATGTTCGCGACACACAGAACCGATGGTGTATAGCAACG
ATACTCGATCAGGACGGGAGAACCATGCGTTCTCACAAGTCTGACCCTAT
GAATTTCGTCACCACACCACATTGCCTGATATATCtccccacactcttgt
atcagagtagtggtacccaattcccctcacatggcatgggttgacccggg
cgaaggtgcattcacttgccaagtgaatcgtagtgacACGGTGGGTATCA
AActcgggcctcccaggcgggagCCAAGGATGATAACCACCATACCACTA
CGCCTTTTATATTCGTGCAATGCAAACAAAACAAGAAACACGAGTTGAAC
AAAGTGTTGAAGAAAGAACAATGGGAAATATTGTGTCCACAAAATGGATC
AACCAACCCAGAAGATTGGGATATCACCTTACTGATTGCTGTGTTGAGGT
CCGTGGTTGGATTGCAACCTGCTGGAGGATGGAAAATCAAATCTCTTCAA
CACAACGATCAATCTATTGGAGCTTTCTTGTTTTTAATcagaaatttaag
aaatgaaTTAATGCATGGTTCAGTCAATGCAGTACCAAACTTACAAGCTT
CCAAGAAACTGAGAGCTCGAATGGAGAACATTTTACTGGGATTGAAATAT
AAGAATATGCAAATGTTTTATGATTTGGAAAGTTGTTCATTGGATAAACA
TGTGTTGGTTATTTCTCGAATGGTCACCAATTTGGATCAAGAAGTGGATT
TGTTGCGAAATGAAGCGAGCGATAATTCGAATGCTATCAAAAATATCGAA
CAAACTAATCAATGGATCAAAACTTATTTGAAACAATTATCTTCGGCAAA
AGCTGACAAAACTGACGTCGAAGGTGAGTTGCAATGGTTTTAATGTCGTC
GAAAACACATTTACTTTCTTAACTCTTTTGAAGTCTTTGCAATGTAGGAG
CTAAATCTTGTTAACTTTTTACCTCTGCCCACTGATTTTTGTGTTCATTG
AATAACACAATTTGTTTTACTTTAGATTTAGCCAagtcaatgaaaatgaa
agctgATAGAGTTGAAATGGAtggtatgttttttatttttcttgtttagt
tcttttaactctggaatttttctgtctgaataggcattttctgataaata
tcactattttctttactttagaTCTAGCCAAGTCAATGAATATGAAAGCT
AATAGAGATGAAGTGGACggtttgttttatttctttacCTGTTTTATATT
TTAGATGAAATGGTAACTACCCTCAAAAGCCTATCTGATAATTGTTTAAT
AAAGATTAGGAGGGATCGCCAAGTTGACGTTCTAAATGAAATTTATCCTT
ATAATAAATATTGATTTATTCTTGTTATCTATCTTATAGTTTTTCGACTT
TTTCTATAAGATATAAGAAATCTTTTGTAATACCTAATTCTACCTAACGC
CTAAGAATTTTTACTTTAGGTTTAGCCAAGTCAATGGATATAAAAGCTGA
TAGAGTTGAAATGgatggtatgttttttttatttaaaccatttgcaaaaa
agtgaaacgagTGTTCCGAGACCTTTACCTCTGTTTAGTCTAAACAAAgt
ttgttttattcttttaaagAAATGTTGCTGAATAAAAAGGTATTTTCTGA
TAGATATCAATTATTTTAACAGAATTGAGCAGCAAAGTTGACCAGCTATC
AATGGAATCAAAATCTGGAAAGGGTAAAGCGTTagttatgatttttattt
tctctacCCATGCTTAAACTTGAATTTATTCAAAGAAACTTTATTTAATA
TTTGTTatccttcttttgtattccttCTAGATACAACAAAGACACATTGG
AATTTGCCAGAGCCTGTTTCCATATTCTTTGGACGAGAAAGTTTGATTGA
ATCTATTCACTTGAAACTTCAACAAAATCAAGCAATTGTTTTGAGTGAAA
TGGGAGGTGTGGGGAAAACACAAACCGCTGCAAAGTTCGTTCAAATGCAT
AAGGATGAATATCAGAAGATATTTTGGATTTCTGCTGTCAGCCTCAAGAG
ATCTCTGAGCGAGATTTTGTGTGCATTTGGTTGTAAACAACTAATAGCTG
ATGAACCTTCGATGGAAACTCTGACTTTCATTTTCCTCTCTAAGATTTGT
GAAGGCTCCAAAGGATTGCTGGTTGTATTGGATGACGTCACTGAGGTCAC
AAAAGACGTCACTTCATTCATTCGaaatgtgaaagaaaaaatcagctTAT
TGTTGACATCTCAATTGAGGGATTGGGAAGATTATGGTTTGATTCAAATT
GCTGTTCCATGTTTCCAAGAACAAGAATCCATTGGTTTCTTACAGAATGA
ACTTACTACAGC Coding sequence (CDS) from alignment at sc0000108_pilon:1027376..1036987+ >MSTRG.13578.17.p1 ID=MSTRG.13578.17.p1|Name=MSTRG.13578.17.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1128bp|location=Sequence derived from alignment at sc0000108_pilon:1027376..1036987+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATCAAAATCTATAAAGGGTAAAGCTTTAGATACAACAAAGACACA
TTGGAATTTGCCAGAGCCTGTTTCCATATTCTTTGGACGAGAAAGTTTGA
TTGAATCTATTCACTTGAAACTTCAACAAAATCAAGCAATTGTTTTGAGT
GAAATGGGAGGTGTGGGGAAAACACAAACCGCTGCAAAGTTCGTTCAAAT
GCATAAGGATGAATATCAGAAGATATTTTGGATTTCTGCTGTCAGCCTCA
AGAGATCTCTGAGCGAGATTTTGTGTGCATTTGGTTGTAAACAACTAATA
GCTGATGAACCTTCGATGGAAACTCTGACTTTCATTTTCCTCTCTAAGAT
TTGTGAAGGCTCCAAAGGATTGCTGGTTGTATTGGATGACGTCACTGAGG
TCACAAAAGACGTCACTTCATTCATTCGaaatgtgaaagaaaaaatcagc
tTATTGTTGACATCTCAATTGAGGGATTGGGAAGATTATGGTTTGATTCA
AATTGCTGTTCCATGTTTCCAAGAACAAGAATCCATTGGTTTCTTACAGA
ATGAACTTACTACAATGGAATCAAAATCTATAAAGGGTAAAGCTTTAGAT
ACAACAAAGACACATTGGAATTTGCCAGAGCCTGTTTCCATATTCTTTGG
ACGAGAAAGTTTGATTGAATCTATTCACTTGAAACTTCAACAAAATCAAG
CAATTGTTTTGAGTGAAATGGGAGGTGTGGGGAAAACACAAACCGCTGCA
AAGTTCGTTCAAATGCATAAGGATGAATATCAGAAGATATTTTGGATTTC
TGCTGTCAGCCTCAAGAGATCTCTGAGCGAGATTTTGTGTGCATTTGGTT
GTAAACAACTAATAGCTGATGAACCTTCGATGGAAACTCTGACTTTCATT
TTCCTCTCTAAGATTTGTGAAGGCTCCAAAGGATTGCTGGTTGTATTGGA
TGACGTCACTGAGGTCACAAAAGACGTCACTTCATTCATTCGaaatgtga
aagaaaaaatcagctTATTGTTGACATCTCAATTGAGGGATTGGGAAGAT
TATGGTTTGATTCAAATTGCTGTTCCATGTTTCCAAGAACAAGAATCCAT
TGGTTTCTTACAGAATGAACTTACTACA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000108_pilon | genome | sc0000108_pilon:1027376..1036987 + |
|
