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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000108_pilon:635143..640539+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13548.3.p2 ID=MSTRG.13548.3.p2|Name=MSTRG.13548.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5397bp|location=Sequence derived from alignment at sc0000108_pilon:635143..640539+ (Clytia hemisphaerica_ch_hm2_pilon)
TAGaagattttgaagaattttgggAGTTGAATTGTATTCATATTCAAGAT
GTCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTCGACACATC
CTCGGAAATTAGGTGAGTTCTGAAAGGATAGGGCTATCTAACGTTAATTA
TGAGCCAACAGATCGGCAAAGACTGCACGCaacccctctgatatgttttg
atatagggcaGCTTTGTATCATGTATAAAATTCTCGTCTGAGAGTGACCT
CCGTCTttctgtttttgagttttagaaaattgattGGCTTGATttagtaa
gttttatatgagagatctttaaattttgttaaagtttaattggaaatttg
aaatggCTGGAGAttaatacaatcattggatttctgaagctttttaaaaa
gaaaactaaaacaGGTTACACAGAAACTCTCGAacaggaattttatacac
gattcGCATCccctttttcaaaattatttctgaTGGGGATGCACGCAGCC
TACCATCGACCTTCCACCAACTcagaaaaatcaagccacctcCATATCAA
CTGCAATTTGTTCGTACCGTTTTTCTTTCAGATAATTTGGTTGAAAAGTT
GGAACAAGATCTAATGGATCTGGAaaaactttccaataaaatggatgcca
aaaaaattaacaagagaGAAGGTAAGTTCctcaaaatgttcattttttat
tataaaaataccGGGATTTGAACCACAGATTTATAAATCCGAAAGGGCCA
AATGTTGTGCTTTGGCTTAAAGATGTGGCGTTTCTCGGTGGAAAATCCCA
CCGAGGTTCCGTGTCATTATAAAAGAATTTCAACGCtttaaccaatcaga
agcttcggtggattttcgaaaacaatagcttAAACAAAAGCTTAAAGCCA
CGACATCTTGCCTTAGCAAGAAGAagcttcgggctttacagaaatttgCG
CCCTCTCTGTTACTAATTCTAGTAAGCTTCTGTTAGAAATAATGAgatca
tcttgacttacgcatattaAGAATACACCATTGTCTCAGTAACCCCGTCA
AAGTCTTAGAATCCACTGGGCTTGTAAGTCTGTCTCGAAAGTAGTAGAAG
CTTCAGTTTTTGTGCATTTTCTAAGCACACTTTCATACTCTTTTTgaaag
ttatacaccgttggaaatatatttccatggagaataatctaaaggataga
agatttttgaaaaattgaaaagtgaagaagaagaattaagatgaaaaaaa
tgaagatataTTCTGctgttttaaaaatcatgacatcaggctatttaaaa
aatttgagctttgctgatttaaaatcttttcagatttttcgtatcttttt
tggataaaaagttacagcgCTCACTCAACTTTCTAACATAGCATAAATGG
GTACtgagaaaatgctcaaaaactgaagtgtgcacatacttttgagacaa
actttagttttttcttgCATTCAAAAGCAGTGTGGTAGTTAATAGCCCCT
AGGAGTATCAGCTCGTtaacaactttctttttatgACGCAATCACTAGAA
ACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAACTACACAGGCTCC
TGCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAG
CTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACTACA
GAGGCTCCTGAAATTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAC
TACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAGCTCCTG
AAACAACACAGGCTCCTGAAACTACACAAGCCCCTGAAACAACACAGGCT
CCTGAAACTACACAGGCTCCTGCAACTACACAAGCCCCTGAAACTACACA
GGCCCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGCAACTA
CACAGGCCCCTGAAACTACACAGGCTTCTGAaacaacacaagttcctgaa
acaacacaggctcctggaacaacacaggctcctggaacaacacaGGCTTC
TGAAACCACACAGGCTCCTGAAACTACACAGGCTCCTGAAACTACACAGA
CTCCTGAAACAACACAAGCTCCTGAAACAACACAGGCTCCTGAAACAACA
CAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAA
ACCTGAAGAAGTTCTACGTAAGTtcatgtaaaatacaaaaactaAATAAG
TTGTGTGCTGTTCTTAGAGAAAGTCTAGCTCTAGTATTATAATGAATTTT
CAATTGTCCTTATATCATATGTAACGGGCAAGTCGTTAGGTAAAAATTCC
AAAGTTTATTCTTCTAAACGAACTCGTCAGTCATTCCATAAACTTGATGC
GTTTCAAGCGAACcgtggtgcagtggtagagcatccagctatggttccca
aggttgtgggttcaacccgcAGCCtagtcataccaaagattctcaaaata
gtagcctctctgcttgatggtcAGCAATTAAGAGGagggtcaagggtaag
tggagacaagggtaagtggagaaatccagggagaaagagtggcgccctct
cctACCTTCTTGTAAATACTTAGTTATCGAAAGAGCAGCCTTCAGTGTAA
TATTTGAAGACTCAAGAGATTTAATTACTTATGAAAATTGTTGCactgaa
atcctgaaaataatTTATGGACAGGCCTATTGACGTTTTTTCCTTGCTAT
ATAATTGTACAGTGATTAAAGGCccgtctccacttgcgcgcactGCGATC
GCTCttcttcgagcaaagcttcgacgctattggtcaaaagaaaaatgaag
caattccattggtgtgatatgacgtaacgatcgcgcgcttgaaaaaaaag
tttaaatacatttatgacgtaatcttttctccaagcaaaaatgattgaag
ccaaagttgcgattgcagcgcgcgcaagtggagaccgaccttaAGGTCAT
AATATAAAACTCTTGCTGAGCTAAAAGGTTGTAAAGAACACGGTATTCAG
TAATTATTTCTCTTTctttatataaatttttatttcaaacaatatttcga
cctccTTATTATTGGAGTTCTTAATCAGGTTTACTTTACAGATTTACATT
TAGACCCCCACTAAggaggtcgaaatattgtttaaaataaaaatttatgt
GAAGAATGATCATTTGAACGTGCATAAATGATTCAAAAACATTCTCATCT
AAAGTATGTCAATTCAAGAATttacttctttctttttcaggaaAAGGTTT
TAGTGATATGGATAATATCCGGGGTAAGTAGTACCAGACAAGTGTTGCAA
GATTCTTTCATAATGTAGAAAGGATAGGGGCACAacatttgtgtaggaga
gcagatttttattacactgtaattatctattcataatgtaacaagataat
tacagtgtcatataAATCTGCTcttctacacaaattttgcgctcCTATCC
TATCTAATCTACTGAGGTTCTTTGATCTTTACTCTTGACTACCCAGCTGG
CAgacaacgttcatataacgttagttgAACGCTCAAACAAcgttgtgcca
gctgggtaagctATGTTCACCACTAACAATGTTTGatcgaaagttttttg
aaacGCGGCACCCTTATGGTAGCAATGTAGGTCAAtttatgtttcaaaaa
taattcttcgttcaaaaattttgctgcCGTGGGCCAGTGATGTGCTAagt
attcttgaaaaaatatttacatttctGACATTTTGATGATGCCACTGGCC
GAAAAACCGtcaaaagtgagcaaaaaatcaTGGGCACACTTAACAAAGAT
TGGCAAtccaaaaaatcttattttaagccaaaattacacccccttcttat
ATACCCACTGGGACccattcccactggaaaaatcggccaaaatatcgtcc
ccggtggaaaattatactgcAATTTTTGTCcgcactgaaaataatcaaat
gaacCAGTCCTCACTACAAactattttgttatttttcccatcccaactga
attttccgacttaataacaaaataattgaaatttccagccataaaaaata
tggcaATGTCAATCACCATCAAGTTTCAGCCCATgattttttatccccat
tggctaaaacaatcctaccgggtctgcgGGAAGGGGGTGTCAAATTTTGC
AAACTCACTCCTTAAAAGTTGTTTCAATTCATATTCTGAATGCTATTTCA
CTTTCACAGAAAGtctagattttattttttagtcaCTTACATTGGGAATT
TAGgcagaaaattttctttcagtcTTTTCATTAATCTCGTCCATTCAGAA
CATGGTCACACGACAAAAGGGATATACAGGGAAAGttcgagttcgaacat
gattctgagtagaaggttgttgcgtgtgttctCGATACGATCTGGACACC
CTGTATCAGTATTTTGAAAACGTGAGAAATCTATTTTAATCCCCCTGCCC
TCCCCCTGGTACCACCTTAATTGAATAACCGAATTCAGAAATTTTTacgt
tttgttttatttcagcAACAACAAGAATGAGAAGATTTACATTGAAAGGT
TACTATACTCTACTAACCCTATCTTGCTCGGGCCTAGGGATGTTTTTTCA
CTCCCCTGGGCTAGATCGGGTTAAAATCTAAGAAAATCTAATAACAAGTA
TGCTTTGAATGTACTTTTGAAATTTACAATAATTCAATTTGATTAAATTA
GCTGGAATGGGATTCACATCAAACAAGGGAGTGTATCGAACGGCACACGT
TGTtcataaaaatattcataatttttaaaggCTTTGGATGTCCTTAATTC
CATCAGTATGCGAGTATTGTTTTGTCTATTTTcccaagaaatcgggtgtt
ttagagtctgcaaagccttgacTTGTATTTATAAGATTTTGACCATCgca
gccttatgttcttatatagtttgttcttatgataAACGTGCAAagaatcg
aataagagagcgtcaacattaaaataaaatcaaaaaataaagccTGGGTG
TGCAATTAAGTGGGCCTGGTAGTAAATGTAAATTTGCTTTTGCTTAGGTG
CCcaattttagttgtttttgcaAAGGTAACAAAAGAATGAAAGTAATCTG
TTAGTCGTgtttgttttcttaatcatatttttcattccaagtagtttttt
cgttatttggaatttttgcataattttttcaaaatggcgacctcatcaaa
tgctcctagtctacttcactggacttcGTTATCgaaaatcatcagaaagt
tcATTCAGAAGTACACTTTAGTGTAGTAAAATACAACGATacaatatatg
ttttttttaaggaaactgtgttgatgaaagaagaaaatgtcgCAAGG Coding sequence (CDS) from alignment at sc0000108_pilon:635143..640539+ >MSTRG.13548.3.p2 ID=MSTRG.13548.3.p2|Name=MSTRG.13548.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5712bp|location=Sequence derived from alignment at sc0000108_pilon:635143..640539+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTCGACACA
TCCTCGGAAATTAGATAATTTGGTTGAAAAGTTGGAACAAGATCTAATGG
ATCTGGAaaaactttccaataaaatggatgccaaaaaaattaacaagaga
GAAGAAACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAACTACACA
GGCTCCTGCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTA
CACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAA
ACTACAGAGGCTCCTGAAATTACACAAGCTCCTGAAACAACACAGGCTCC
TGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAG
CTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCCCCTGAAACAACA
CAGGCTCCTGAAACTACACAGGCTCCTGCAACTACACAAGCCCCTGAAAC
TACACAGGCCCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTG
CAACTACACAGGCCCCTGAAACTACACAGGCTTCTGAaacaacacaaACT
CCTGAAACAACACAAGCTCCTGAAACAACACAGGCTCCTGAAACAACACA
GGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAAAC
CTGAAGAAGTTCTACgaaAAGGTTTTAGTGATATGGATAATATCCGGGcA
ACAACAAGAATGAGAAGATTTACATTGAAAGgaaactgtgttgatgaaag
aagaaaatgtcgCAAGATGTCACCAAAATTGATGTATCTTCTCCTTTTGA
TGGTCGTTTCGACACATCCTCGGAAATTAGATAATTTGGTTGAAAAGTTG
GAACAAGATCTAATGGATCTGGAaaaactttccaataaaatggatgccaa
aaaaattaacaagagaGAAGAAACTACGCAGGCTCCTGAAACAACACAGG
CTCCTGGAACTACACAGGCTCCTGCAACTACACAAGCTCCTGAAACTACA
GAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAC
TACACAAGCTCCTGAAACTACAGAGGCTCCTGAAATTACACAAGCTCCTG
AAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACTACAGAGGCT
CCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACA
AGCCCCTGAAACAACACAGGCTCCTGAAACTACACAGGCTCCTGCAACTA
CACAAGCCCCTGAAACTACACAGGCCCCTGAAACAACACAGGCTCCTGAA
ACTACACAAGCTCCTGCAACTACACAGGCCCCTGAAACTACACAGGCTTC
TGAaacaacacaaACTCCTGAAACAACACAAGCTCCTGAAACAACACAGG
CTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACAACA
CAGGCTCCTGAAAAACCTGAAGAAGTTCTACgaaAAGGTTTTAGTGATAT
GGATAATATCCGGGcAACAACAAGAATGAGAAGATTTACATTGAAAGgaa
actgtgttgatgaaagaagaaaatgtcgCAAGATGTCACCAAAATTGATG
TATCTTCTCCTTTTGATGGTCGTTTCGACACATCCTCGGAAATTAGATAA
TTTGGTTGAAAAGTTGGAACAAGATCTAATGGATCTGGAaaaactttcca
ataaaatggatgccaaaaaaattaacaagagaGAAGAAACTACGCAGGCT
CCTGAAACAACACAGGCTCCTGGAACTACACAGGCTCCTGCAACTACACA
AGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAGCTCCTGAAACAA
CACAGGCTCCTGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAA
ATTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCC
TGAAACTACAGAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGG
CTCCTGAAACTACACAAGCCCCTGAAACAACACAGGCTCCTGAAACTACA
CAGGCTCCTGCAACTACACAAGCCCCTGAAACTACACAGGCCCCTGAAAC
AACACAGGCTCCTGAAACTACACAAGCTCCTGCAACTACACAGGCCCCTG
AAACTACACAGGCTTCTGAaacaacacaaACTCCTGAAACAACACAAGCT
CCTGAAACAACACAGGCTCCTGAAACAACACAGGCTCCTGAAACTACACA
AGCTCCTGAAACAACACAGGCTCCTGAAAAACCTGAAGAAGTTCTACgaa
AAGGTTTTAGTGATATGGATAATATCCGGGcAACAACAAGAATGAGAAGA
TTTACATTGAAAGgaaactgtgttgatgaaagaagaaaatgtcgCAAGAT
GTCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTCGACACATC
CTCGGAAATTAGATAATTTGGTTGAAAAGTTGGAACAAGATCTAATGGAT
CTGGAaaaactttccaataaaatggatgccaaaaaaattaacaagagaGA
AGAAACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAACTACACAGG
CTCCTGCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACA
CAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAAC
TACAGAGGCTCCTGAAATTACACAAGCTCCTGAAACAACACAGGCTCCTG
AAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAGCT
CCTGAAACAACACAGGCTCCTGAAACTACACAAGCCCCTGAAACAACACA
GGCTCCTGAAACTACACAGGCTCCTGCAACTACACAAGCCCCTGAAACTA
CACAGGCCCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGCA
ACTACACAGGCCCCTGAAACTACACAGGCTTCTGAaacaacacaaACTCC
TGAAACAACACAAGCTCCTGAAACAACACAGGCTCCTGAAACAACACAGG
CTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAAACCT
GAAGAAGTTCTACgaaAAGGTTTTAGTGATATGGATAATATCCGGGcAAC
AACAAGAATGAGAAGATTTACATTGAAAGgaaactgtgttgatgaaagaa
gaaaatgtcgCAAGATGTCACCAAAATTGATGTATCTTCTCCTTTTGATG
GTCGTTTCGACACATCCTCGGAAATTAGATAATTTGGTTGAAAAGTTGGA
ACAAGATCTAATGGATCTGGAaaaactttccaataaaatggatgccaaaa
aaattaacaagagaGAAGAAACTACGCAGGCTCCTGAAACAACACAGGCT
CCTGGAACTACACAGGCTCCTGCAACTACACAAGCTCCTGAAACTACAGA
GGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTA
CACAAGCTCCTGAAACTACAGAGGCTCCTGAAATTACACAAGCTCCTGAA
ACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACTACAGAGGCTCC
TGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAG
CCCCTGAAACAACACAGGCTCCTGAAACTACACAGGCTCCTGCAACTACA
CAAGCCCCTGAAACTACACAGGCCCCTGAAACAACACAGGCTCCTGAAAC
TACACAAGCTCCTGCAACTACACAGGCCCCTGAAACTACACAGGCTTCTG
AaacaacacaaACTCCTGAAACAACACAAGCTCCTGAAACAACACAGGCT
CCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACA
GGCTCCTGAAAAACCTGAAGAAGTTCTACgaaAAGGTTTTAGTGATATGG
ATAATATCCGGGcAACAACAAGAATGAGAAGATTTACATTGAAAGgaaac
tgtgttgatgaaagaagaaaatgtcgCAAGATGTCACCAAAATTGATGTA
TCTTCTCCTTTTGATGGTCGTTTCGACACATCCTCGGAAATTAGATAATT
TGGTTGAAAAGTTGGAACAAGATCTAATGGATCTGGAaaaactttccaat
aaaatggatgccaaaaaaattaacaagagaGAAGAAACTACGCAGGCTCC
TGAAACAACACAGGCTCCTGGAACTACACAGGCTCCTGCAACTACACAAG
CTCCTGAAACTACAGAGGCTCCTGAAACTACACAAGCTCCTGAAACAACA
CAGGCTCCTGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAAT
TACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTG
AAACTACAGAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCT
CCTGAAACTACACAAGCCCCTGAAACAACACAGGCTCCTGAAACTACACA
GGCTCCTGCAACTACACAAGCCCCTGAAACTACACAGGCCCCTGAAACAA
CACAGGCTCCTGAAACTACACAAGCTCCTGCAACTACACAGGCCCCTGAA
ACTACACAGGCTTCTGAaacaacacaaACTCCTGAAACAACACAAGCTCC
TGAAACAACACAGGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAG
CTCCTGAAACAACACAGGCTCCTGAAAAACCTGAAGAAGTTCTACgaaAA
GGTTTTAGTGATATGGATAATATCCGGGcAACAACAAGAATGAGAAGATT
TACATTGAAAGgaaactgtgttgatgaaagaagaaaatgtcgCAAGATGT
CACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTCGACACATCCT
CGGAAATTAGATAATTTGGTTGAAAAGTTGGAACAAGATCTAATGGATCT
GGAaaaactttccaataaaatggatgccaaaaaaattaacaagagaGAAG
AAACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAACTACACAGGCT
CCTGCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACA
AGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACTA
CAGAGGCTCCTGAAATTACACAAGCTCCTGAAACAACACAGGCTCCTGAA
ACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAGCTCC
TGAAACAACACAGGCTCCTGAAACTACACAAGCCCCTGAAACAACACAGG
CTCCTGAAACTACACAGGCTCCTGCAACTACACAAGCCCCTGAAACTACA
CAGGCCCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGCAAC
TACACAGGCCCCTGAAACTACACAGGCTTCTGAaacaacacaaACTCCTG
AAACAACACAAGCTCCTGAAACAACACAGGCTCCTGAAACAACACAGGCT
CCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAAACCTGA
AGAAGTTCTACgaaAAGGTTTTAGTGATATGGATAATATCCGGGcAACAA
CAAGAATGAGAAGATTTACATTGAAAGgaaactgtgttgatgaaagaaga
aaatgtcgCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000108_pilon | genome | sc0000108_pilon:635143..640539 + |
|
