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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000106_pilon:462174..464577+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13404.18.p1 ID=MSTRG.13404.18.p1|Name=MSTRG.13404.18.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2404bp|location=Sequence derived from alignment at sc0000106_pilon:462174..464577+ (Clytia hemisphaerica_ch_hm2_pilon)
GACGGGTTGAAAAATGTAGTGTGTTTTTCTGTTATCAGTGAGATTTTGTA
ATAATATATTTTGCGAAATGTAATGTCTGTTGACTTCATGGGCTTATCTG
tttttttATACAGATgtatttttatgacttttccAAGTTCTCCTGGGGCT
TTAGTTCTAATTTTGACgaaaagaaaccaaaaagtGATCCTTCATTTAAG
TCTTTCTGATTTATCTTGAATCTGAAGAAAATCTCtttcttaaaaggttt
ttttaatttttaagtcaaaagtgTTTTACGTACTCAAAGTCTTCACGCTG
TAATTTCGTATAGAGTTCTGTTTAAATTTGGATTTGATCTTGCAAACAAT
CCGTGTACGTAATGGCTTTACCGTATGCATGAAAATATTATAACATCAAA
CTTAAAATtaacttttaattgaatttttgtCAACTTTGTTTTTCAACAAA
CTCAATCACCATATCTacaatgaaatattttatgatttatacTTCATTAC
TATTAGACGTTGTGCTATAAATCACATTATAGGAGAGATGACAttttctc
tgatttgttttgcaatgtgcctcttgcagactttttgaggcttcttttgc
ttttttatatCTGACTCAATAATTTTCAGTAGATAAAACCGTACAAGGCT
TGGTTCGCTCTGATTAAACTGTTTTAGATTCTGAATTTGCCAGTAAAGTA
GCTTTTTCTAGTGCAAAAGAAAAGGAAGTTTACCTAGGTCCTCACGATAG
CAGAAAAGTTTCGGACAACGGTTACTTCTTTAACATGATTCAACTTTAAT
TGCGCGGACGGCTCCTGAGGGACTGGTATTGAATTTACAAAGAAATGACG
TCCAAATTCTATGTCTTCGAGGAATATAATGCAAAAACttcagaaatttt
gacgtcattctttCCTGGTAAATTCGAACCCAGATTCCTTAAGCGTTGAC
AGGTGTTACTTACAATATGGTACTTCTTCTTAACCaaattttcttctatt
ttttctaTAGGCTAATCGATCAGATAGCCCGACTCCGTCGTCCGTCTCCA
CTATGTCAGAATGGGACGATTACAATGAGACGCTAACGCAAGTCTTGACA
TGGCTCATGCAAGCTGAAACACAACTCAAACAACAGGAACCTGTCTCTGA
AAATGTGGACAAAGTCAAAGAACAATTTAGAGAACATGAGGTATTCTTTT
GATGCTTACGCAACTGTGATCTTATAGTTTGAATTTGTTCCAgagcattt
ttacattttttcactTCTCTTCTCTAACTCGAACCTCACTCTAACTcgga
tttttttaaacaaaccatttcaaacgATCATCTAATACAAGAAATCTCAC
ACAAGTTTATCTATAATAACCTTTAGACGTTcggctcaaattttgacgtc
attctaATCTTTCCTGGTAAATGAAAAATCATGATTTAATCTATATCACC
CTTGAGTACAGTTAccactctcttattcgattgCCAAGTTGTCAAGGGAT
TATTGGATTTTCTCGAGTAAGGTAGCGTATCGAGTAGTAGAGCGTCGTTC
GTGAGACTTTTTTGCTgatggtgactttcaatattatggAATGATGGAGC
CTATTGAATAGTTGAGTATCTAATAAATTTTAACCAACCATTGTTTCCTT
ACTCTTCTTTTACTACAGGAATTCATGATGATTTTAACTTCACATCAAGC
CAGTGTGGGAAGCGTATTGGAGTTTGGAAGTCAGCTCATCAACGAAAATA
TCGTCGTTGGTCGGGAGGAGCGTGAAATTAGGGAACAAATGTCAGTTTTG
TCCGAAAGATGGGAAAATCTTCGAGTGTCCGCTATGCAAAGACAATCAGA
GTAAGGATTTTAGACTGCATTCCCTTTCTTTTTTACTGTCTTTTATGACA
ATTTAGTGAGGGAAATTAAACCCTCCTGTTCAAAGAAAACAGTTTTACCC
AAATAAAGAGTAACTCtgaattttttataataacaaactatatataCATG
ATggttcgatggccaaaatattaggaacaagttaagaacatcttaaggtt
GTGCTGactaaaattaaacaaaaataatcacaaaaagGTGACTGATATAA
CATGTTAAGGATATTTGTAGCCttcaaactaaaaaagttaagaacacccg
aaggcttcaaaaatttaggatgttcttataaaggaaATATGTATACAGAA
GAAAAAGTATGAAATAACAAAATGACATGATCActattgtctttttgtag
attACATCAACAACTGATGAAACTTCAACAACTCCAACTCCAAGAGCTTG
CAAACTGGCTGACAACAGCTGAAAACATCATCGAAACTACGGGACCAATC
GGATCAGATTTGGAAAGCGTTAAAATTCAAGTGGACGCTCACAAGACGTT
TCAG Coding sequence (CDS) from alignment at sc0000106_pilon:462174..464577+ >MSTRG.13404.18.p1 ID=MSTRG.13404.18.p1|Name=MSTRG.13404.18.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2124bp|location=Sequence derived from alignment at sc0000106_pilon:462174..464577+ (Clytia hemisphaerica_ch_hm2_pilon)
GACGGGTTGAAAAATGCTAATCGATCAGATAGCCCGACTCCGTCGTCCGT
CTCCACTATGTCAGAATGGGACGATTACAATGAGACGCTAACGCAAGTCT
TGACATGGCTCATGCAAGCTGAAACACAACTCAAACAACAGGAACCTGTC
TCTGAAAATGTGGACAAAGTCAAAGAACAATTTAGAGAACATGAGGAATT
CATGATGATTTTAACTTCACATCAAGCCAGTGTGGGAAGCGTATTGGAGT
TTGGAAGTCAGCTCATCAACGAAAATATCGTCGTTGGTCGGGAGGAGCGT
GAAATTAGGGAACAAATGTCAGTTTTGTCCGAAAGATGGGAAAATCTTCG
AGTGTCCGCTATGCAAAGACAATCAGAattACATCAACAACTGATGAAAC
TTCAACAACTCCAACTCCAAGAGCTTGCAAACTGGCTGACAACAGCTGAA
AACATCATCGAAACTACGGGACCAATCGGATCAGATTTGGAAAGCGTTAA
AATTCAAGTGGACGCTCACAAGACGTTTCAGGACGGGTTGAAAAATGCTA
ATCGATCAGATAGCCCGACTCCGTCGTCCGTCTCCACTATGTCAGAATGG
GACGATTACAATGAGACGCTAACGCAAGTCTTGACATGGCTCATGCAAGC
TGAAACACAACTCAAACAACAGGAACCTGTCTCTGAAAATGTGGACAAAG
TCAAAGAACAATTTAGAGAACATGAGGAATTCATGATGATTTTAACTTCA
CATCAAGCCAGTGTGGGAAGCGTATTGGAGTTTGGAAGTCAGCTCATCAA
CGAAAATATCGTCGTTGGTCGGGAGGAGCGTGAAATTAGGGAACAAATGT
CAGTTTTGTCCGAAAGATGGGAAAATCTTCGAGTGTCCGCTATGCAAAGA
CAATCAGAattACATCAACAACTGATGAAACTTCAACAACTCCAACTCCA
AGAGCTTGCAAACTGGCTGACAACAGCTGAAAACATCATCGAAACTACGG
GACCAATCGGATCAGATTTGGAAAGCGTTAAAATTCAAGTGGACGCTCAC
AAGACGTTTCAGGACGGGTTGAAAAATGCTAATCGATCAGATAGCCCGAC
TCCGTCGTCCGTCTCCACTATGTCAGAATGGGACGATTACAATGAGACGC
TAACGCAAGTCTTGACATGGCTCATGCAAGCTGAAACACAACTCAAACAA
CAGGAACCTGTCTCTGAAAATGTGGACAAAGTCAAAGAACAATTTAGAGA
ACATGAGGAATTCATGATGATTTTAACTTCACATCAAGCCAGTGTGGGAA
GCGTATTGGAGTTTGGAAGTCAGCTCATCAACGAAAATATCGTCGTTGGT
CGGGAGGAGCGTGAAATTAGGGAACAAATGTCAGTTTTGTCCGAAAGATG
GGAAAATCTTCGAGTGTCCGCTATGCAAAGACAATCAGAattACATCAAC
AACTGATGAAACTTCAACAACTCCAACTCCAAGAGCTTGCAAACTGGCTG
ACAACAGCTGAAAACATCATCGAAACTACGGGACCAATCGGATCAGATTT
GGAAAGCGTTAAAATTCAAGTGGACGCTCACAAGACGTTTCAGGACGGGT
TGAAAAATGCTAATCGATCAGATAGCCCGACTCCGTCGTCCGTCTCCACT
ATGTCAGAATGGGACGATTACAATGAGACGCTAACGCAAGTCTTGACATG
GCTCATGCAAGCTGAAACACAACTCAAACAACAGGAACCTGTCTCTGAAA
ATGTGGACAAAGTCAAAGAACAATTTAGAGAACATGAGGAATTCATGATG
ATTTTAACTTCACATCAAGCCAGTGTGGGAAGCGTATTGGAGTTTGGAAG
TCAGCTCATCAACGAAAATATCGTCGTTGGTCGGGAGGAGCGTGAAATTA
GGGAACAAATGTCAGTTTTGTCCGAAAGATGGGAAAATCTTCGAGTGTCC
GCTATGCAAAGACAATCAGAattACATCAACAACTGATGAAACTTCAACA
ACTCCAACTCCAAGAGCTTGCAAACTGGCTGACAACAGCTGAAAACATCA
TCGAAACTACGGGACCAATCGGATCAGATTTGGAAAGCGTTAAAATTCAA
GTGGACGCTCACAAGACGTTTCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106_pilon | genome | sc0000106_pilon:462174..464577 + |
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