MSTRG.13349.1.p1 (mRNA) -

Overview
NameMSTRG.13349.1.p1
Unique NameMSTRG.13349.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000105_pilon:660085..661562+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13349.1.p1 ID=MSTRG.13349.1.p1|Name=MSTRG.13349.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1478bp|location=Sequence derived from alignment at sc0000105_pilon:660085..661562+ (Clytia hemisphaerica_ch_hm2_pilon)
ATATCTTCATACACCGGGATGGATTTCAAGACGTTTTTATTCATGGTGTT AAGTCCTTTGACCGCTTGTCTCATGATTATCCTTAACGTCATTGAGATTT GGTTCATCTTCAAACATAAAATCATGGATCGAGTCAAATCTACCGTCTAC ATTTTGAACTTGGCTGTTTCAGATATCATCCTTGGTGTCTTCGTCTTAAT GGTCAAAATCTTGAAGCTGGCAGAACAAAACCATGGAGTTGACCCCAAAT ACAGACTCTTCTTTCAGCTTAAAATGGTTTACATTTCTCTGTATGTCTCC GTCCTGACATTGGCTGCTTTGACGGTGGAAAGAGTGTTGGCTGTCAAGAA ACCTATGTATTATAACATGCTGGAATGGAGCAAAAAGTGCATCATCTGTG TTGCAATTTGGGCGTTAACCGTCCTGGCTATAATTCTGCATAACATAGCA GTCAACGATCATGAGAAAGAGTACATCAAAACACCTCTGGTTATTTTCAT TACCGCTTTTCTGATCACCATTTCTTATGCTGTCATTTTGAGAACGTTGA AGCGAAGAACTCTCAGAAATGCTCAACAAAACGATACAGCAGGGGCTCAA GACGAAACAAAGAAGAAAACCTTCAATAAAGCAGAGAAAAGATTCTTGAA TTTCTGCATCAAATCTTTCATCATTTTTGTGGTGTGTTGGATGCCACTGG CTGCTTATGGCGTTTGTTACGCTGGCGGGTTTATCACATACTGGAAGTAT AAAGATTTGTTCGATTTCGTGACACATATCATCGCATTTTGGAATTCGAA TGCATCACCTATTATGTTCTTGCATCATAATCGAGGGGTCCTGAGAAAAG TCAATACCATTAATTCGACTTCCACCAACGGAACAAGGGCATCGAGAATT ACAACATCTTCCAGTGAGGCTTGATAAATAAATGtatgaccaatgttatg taatAGACCTTGCTGATGAAGGAACGAACATAATCGAGGGGTCCTGACGA GAGTCAATTGTCAAGAGACAAGAAATACCCAAGCCAGCAGCCAAGTCTGA AACGCTCAAGATTTTACAAAGAACATTAAATCGTCGGATGTCGAAGACGG AACAAGGACAGCACTgttaaaactgttaaaaaacAAAGAGAATGAATCAA TTTACATTGAAAAATCAGTACAAAAACTAATGCTTGATAGGGCAAAAATA AGTCATCTATCAATGTTCAGATCGGACGCTAAACCTTGTTCAATGTGCAA GTATGACCTCACACTAACCATATTCATTTTGaataaagaatatatttccC AGAGCCTCAGTTGACTGGGTCTAAAAACACTAACCACATTCGATGTTTGG AGCACGTCCTGTGTAAATATTATAACTTAATCAATCTTAAGGTTTGAATT TATAAAAGATATGAACAAAATTAATGAGAATATGTCATGCATTTTGCTTT ACTGCTATCCCCTGTACCTAACCTCCcg

Coding sequence (CDS) from alignment at sc0000105_pilon:660085..661562+

>MSTRG.13349.1.p1 ID=MSTRG.13349.1.p1|Name=MSTRG.13349.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=924bp|location=Sequence derived from alignment at sc0000105_pilon:660085..661562+ (Clytia hemisphaerica_ch_hm2_pilon)
ATATCTTCATACACCGGGATGGATTTCAAGACGTTTTTATTCATGGTGTT
AAGTCCTTTGACCGCTTGTCTCATGATTATCCTTAACGTCATTGAGATTT
GGTTCATCTTCAAACATAAAATCATGGATCGAGTCAAATCTACCGTCTAC
ATTTTGAACTTGGCTGTTTCAGATATCATCCTTGGTGTCTTCGTCTTAAT
GGTCAAAATCTTGAAGCTGGCAGAACAAAACCATGGAGTTGACCCCAAAT
ACAGACTCTTCTTTCAGCTTAAAATGGTTTACATTTCTCTGTATGTCTCC
GTCCTGACATTGGCTGCTTTGACGGTGGAAAGAGTGTTGGCTGTCAAGAA
ACCTATGTATTATAACATGCTGGAATGGAGCAAAAAGTGCATCATCTGTG
TTGCAATTTGGGCGTTAACCGTCCTGGCTATAATTCTGCATAACATAGCA
GTCAACGATCATGAGAAAGAGTACATCAAAACACCTCTGGTTATTTTCAT
TACCGCTTTTCTGATCACCATTTCTTATGCTGTCATTTTGAGAACGTTGA
AGCGAAGAACTCTCAGAAATGCTCAACAAAACGATACAGCAGGGGCTCAA
GACGAAACAAAGAAGAAAACCTTCAATAAAGCAGAGAAAAGATTCTTGAA
TTTCTGCATCAAATCTTTCATCATTTTTGTGGTGTGTTGGATGCCACTGG
CTGCTTATGGCGTTTGTTACGCTGGCGGGTTTATCACATACTGGAAGTAT
AAAGATTTGTTCGATTTCGTGACACATATCATCGCATTTTGGAATTCGAA
TGCATCACCTATTATGTTCTTGCATCATAATCGAGGGGTCCTGAGAAAAG
TCAATACCATTAATTCGACTTCCACCAACGGAACAAGGGCATCGAGAATT
ACAACATCTTCCAGTGAGGCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13349MSTRG.13349Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13349.1.p1.exon1MSTRG.13349.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13349.1.p1MSTRG.13349.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000105_pilongenomesc0000105_pilon:660085..661562 +