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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000105_pilon:555279..558703+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13344.1.p1 ID=MSTRG.13344.1.p1|Name=MSTRG.13344.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3425bp|location=Sequence derived from alignment at sc0000105_pilon:555279..558703+ (Clytia hemisphaerica_ch_hm2_pilon)
tatccttttattttcatattataGAGTTTGACGAGAATACACATAGCGGT
GAGAGACAGTGAGAAAAATGCTAGATCACCATGGAGGAGGAAACTCTAAA
TTACAGAGACTTTTCTTGGTGCTTCTCGGTGGGGTGATTGTTTTGTTGGC
ATTAGAAGGATTGTCGATGGTCAGAAGTGAAGCAAGGTGTACTATACAAC
AAGGTAGGAGAATGTTCTTTTGATctacacacccccttctcacggaccta
ctgggaccccttgtcactggaaaaattggccaaaatatcatcccgGGTGG
AGAATTGTTCTCTAATATTGGCatccgctgaaaataatcaattggtatat
tatgctattttttccattcccactgaattttctggcttgaaaacaataga
attcaaatccccagctataaaaaaatatgggaatatcaattcccatcgtc
ctcaggccctttaagtggatttcttttcggaaaaaaagttgattctacta
accatttttgaaacatcattactctttcaaaaaaaattattttcaaaatt
gtttttcaacTTCATGACGAGAAAAGATAGAATTTTAATATGGTTACAAT
GATACCCATCAAGTCGGTGAAAAATTTACATAGAACTTCATTAATGTGga
aaaaatcgctaaaaaatacataaaatggcGCCTCCGCGGGATACGGTGTT
GAGCTTTTCACCTCAACTTTTGTACACGAGTACTTCAAGCAGGTGGCTAT
TCGAAACTACCTCAATAGTGAAAGATATATTTGTAGTCTTTTCTCTATGC
AAGAAAGAATTACCAAAACTTCAGTATTTTCACTTGAGTTCAAAGTTCAA
GCCGTATTTTAACTATATTGCACAATGAAACCCTCCACTACAGAGGTACT
TTCAATATACTTGCTCTCCTCCCTACTgccttggaaaataaaaatcacGA
ATTTCCAATTTTGTATCGCGCGGAATGTAGGAAAAACATAGTTTCTCcaa
gaaaatactcaaaaaaaggAAGGTACAGGCCAATGGGTAAACCTGTTTGT
TAAAAATGGTTGATTGACAAGTAGATTCTTACGCAATAAGCCAGTaatca
aatttataaagaagACGCACTTCTTTCGTTCTTTTGAGCATAAACCAATT
AGCTCTCtctcttatttttttcttaaaagaatgtttacaagaataagatt
tcgtttattaaataatcttttaaaagtgttgATTGATGCGTGAGGCTTTC
TCATTGAACATACAACTCTGTCGGTGtttttttAGACTGTACCAGAGAGA
TCTTAGAAAAGAGGGAAAAGACAATTTTCGTTTCAGAACCACTTAAAGGG
CCTgagtctgttatttttacccccactggctgaaaatgTGTATCTACCCC
TATTACTTTGAAACAGCCATGTCTCATATCGACACAAATTCAAGTCCAAG
TTCAATCTGTATTTAGAACCAGTTGCACCTCTTTTTGATCTTACTGATGG
ACATTTGTGCGAATCattaaatcataaaaaaagcgGACAGcgagggactg
ggttcgaggtTAATCCGAGTGGGAAATGAGTTTCTGTATTTCGGCcaaaa
gaataaaatgaaatagGATTTGAAGAGCAAATTTAGTGCTTACGTCAAAC
TAGCACACTAGCCCTTTAAGTAACTACCGATGTCGGCATTTGTATGTATT
TCAGAAAATAAAGTTAAATGTGATGGTAAATTCTCTTGTCGCTCATGttg
gcatatgccgacatctggtaaataggtcgaaccttcttttttcctgacaa
ataggtcgaaccttaaaaaatacgcaCGTCATTAAAGGgcttttacattt
gaaaatgaCCACCGATGTCTTCATTGCTTTCATTTCAGTTCCAGTTGTGA
TACAACAAGGAGATAGGCGGGAAAAGGTAAATTCTTGATTTGTATCAGCG
TTCccaatttcaacttttatttAAAAGCTGTTTCTATTTAGTACAAACTA
CGCAGCAGTCGAGGTTATAATGAAAGATTATTGTGGAAATTTGTCCTAAG
AAGTGCACAGTGTAAAAAATCTCAGCCAAGCCCGCTATCCCGAAGTTTTA
AGCTCGTTTCGACAAACACTTATTACCATTTTAAGCTAGTCTGATCCAAA
TTATTTAAATTCCCGAACtcatatcaaaattttcttatCAGGTTCCAAGA
GAGTTTGATCTTCCAGACACTCATTCTGAACGACgtctaaaaacaacaaa
aaccacaagaaaaactgtcccaacgactgaagccaaaacaacaGCTGAAC
CTGTGACAGATGAAAACATAGCTACAGACACACCAGCACCAGTTATCGAT
CAGAATCGCCAAACACAACTCCAGCGTCAACAACATTTGAAAGAGTTTTG
CCAAAACAATCGAAGATTACGGACGGAAAAGTTCAAAATCCGAGATTTCC
ATTTCATATATAGCGACAAAGCGTCCGCTCTATATTGTTATATCCCAAAA
GTGGCTTGCACTAATTGGAAAAAGGTGTTCCAAGTGATGGATGGGAATTA
TGAAACTCCTTTAGATATCAAGGGTAAagaaaaagttcattatttaaaGT
TCAATACTTTTGAGAAAACGAATTTAACTGAAATCGAGTGGCGTCGAAAT
TTGTATTATTCTTTCTTGTTCATACGGCACCCCTTTGAAAGGGTTTTATC
AGCATACAGAAATAAGTTTCAAGATCCCTACAACGAACAGTACCAACGTG
TGTACGGCTCACGTGTTTTACGTCTGTTCCGTAAGAACCTTACGGAAGCC
GAGTACAAAGCCGGGAAGAACGTCACTTTCCGAGAATTCGCCGATTATGT
TATCCGAGTTCATACGAAACGAGAATTTGTAAACGAGCATTGGGACACGA
TGCATAATTTATGCCACCCTTGTCGTGTGAAGTATGATTATATTGGCTCA
ATGGACTCACTTATCGAAGACTCGGAGACGGTTCTAAAAGAGATTGGTTG
GTATAATcgagtcaaatttcccgccaAAGCAACGGATAAATACAAGAATA
AATTACCCACTTTGatgaagcaatatttttcaCAATTACCGAGAAATGTG
ACAATGAAGCTGTATAAAATTTATGAAGCTGATTTTAAAGCTTTTGGATA
CTCGGCCGATGAATATCTGTAGGGATTAACAAATTATAGTTCAGTTTTTA
ATGCACATCTTAGATACTTTATTTTATTCCTTTAAGATATTTAGAGATTA
GAAATTTCGAAAGCATTACAAAGAATTTACTCCACACAGAAATGGATGGT
TGTAGTGATTGAGCCGATGATAACATGTATAACAGTTTATATCAGAACCT
TTGTGCAACTTTAAGCCTATTATAAATTTGCTTTTATATCTATTCaacat
caaaatctaagagtAAATGagattt Coding sequence (CDS) from alignment at sc0000105_pilon:555279..558703+ >MSTRG.13344.1.p1 ID=MSTRG.13344.1.p1|Name=MSTRG.13344.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3465bp|location=Sequence derived from alignment at sc0000105_pilon:555279..558703+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAGATCACCATGGAGGAGGAAACTCTAAATTACAGAGACTTTTCTT
GGTGCTTCTCGGTGGGGTGATTGTTTTGTTGGCATTAGAAGGATTGTCGA
TGGTCAGAAGTGAAGCAAGGTGTACTATACAACAAGTTCCAGTTGTGATA
CAACAAGGAGATAGGCGGGAAAAGGTTCCAAGAGAGTTTGATCTTCCAGA
CACTCATTCTGAACGACgtctaaaaacaacaaaaaccacaagaaaaactg
tcccaacgactgaagccaaaacaacaGCTGAACCTGTGACAGATGAAAAC
ATAGCTACAGACACACCAGCACCAGTTATCGATCAGAATCGCCAAACACA
ACTCCAGCGTCAACAACATTTGAAAGAGTTTTGCCAAAACAATCGAAGAT
TACGGACGGAAAAGTTCAAAATCCGAGATTTCCATTTCATATATAGCGAC
AAAGCGTCCGCTCTATATTGTTATATCCCAAAAGTGGCTTGCACTAATTG
GAAAAAGGTGTTCCAAGTGATGGATGGGAATTATGAAACTCCTTTAGATA
TCAAGGGTAAagaaaaagttcattatttaaaGTTCAATACTTTTGAGAAA
ACGAATTTAACTGAAATCGAGTGGCGTCGAAATTTGTATTATTCTTTCTT
GTTCATACGGCACCCCTTTGAAAGGGTTTTATCAGCATACAGAAATAAGT
TTCAAGATCCCTACAACGAACAGTACCAACGTGTGTACGGCTCACGTGTT
TTACGTCTGTTCCGTAAGAACCTTACGGAAGCCGAGTACAAAGCCGGGAA
GAACGTCACTTTCCGAGAATTCGCCGATTATGTTATCCGAGTTCATACGA
AACGAGAATTTGTAAACGAGCATTGGGACACGATGCATAATTTATGCCAC
CCTTGTCGTGTGAAGTATGATTATATTGGCTCAATGGACTCACTTATCGA
AGACTCGGAGACGGTTCTAAAAGAGATTGGTTGGTATAATcgagtcaaat
ttcccgccaAAGCAACGGATAAATACAAGAATAAATTACCCACTTTGatg
aagcaatatttttcaCAATTACCGAGAAATGTGACAATGAAGCTGTATAA
AATTTATGAAGCTGATTTTAAAGCTTTTGGATACTCGGCCGATGAATATC
TGTAGATGCTAGATCACCATGGAGGAGGAAACTCTAAATTACAGAGACTT
TTCTTGGTGCTTCTCGGTGGGGTGATTGTTTTGTTGGCATTAGAAGGATT
GTCGATGGTCAGAAGTGAAGCAAGGTGTACTATACAACAAGTTCCAGTTG
TGATACAACAAGGAGATAGGCGGGAAAAGGTTCCAAGAGAGTTTGATCTT
CCAGACACTCATTCTGAACGACgtctaaaaacaacaaaaaccacaagaaa
aactgtcccaacgactgaagccaaaacaacaGCTGAACCTGTGACAGATG
AAAACATAGCTACAGACACACCAGCACCAGTTATCGATCAGAATCGCCAA
ACACAACTCCAGCGTCAACAACATTTGAAAGAGTTTTGCCAAAACAATCG
AAGATTACGGACGGAAAAGTTCAAAATCCGAGATTTCCATTTCATATATA
GCGACAAAGCGTCCGCTCTATATTGTTATATCCCAAAAGTGGCTTGCACT
AATTGGAAAAAGGTGTTCCAAGTGATGGATGGGAATTATGAAACTCCTTT
AGATATCAAGGGTAAagaaaaagttcattatttaaaGTTCAATACTTTTG
AGAAAACGAATTTAACTGAAATCGAGTGGCGTCGAAATTTGTATTATTCT
TTCTTGTTCATACGGCACCCCTTTGAAAGGGTTTTATCAGCATACAGAAA
TAAGTTTCAAGATCCCTACAACGAACAGTACCAACGTGTGTACGGCTCAC
GTGTTTTACGTCTGTTCCGTAAGAACCTTACGGAAGCCGAGTACAAAGCC
GGGAAGAACGTCACTTTCCGAGAATTCGCCGATTATGTTATCCGAGTTCA
TACGAAACGAGAATTTGTAAACGAGCATTGGGACACGATGCATAATTTAT
GCCACCCTTGTCGTGTGAAGTATGATTATATTGGCTCAATGGACTCACTT
ATCGAAGACTCGGAGACGGTTCTAAAAGAGATTGGTTGGTATAATcgagt
caaatttcccgccaAAGCAACGGATAAATACAAGAATAAATTACCCACTT
TGatgaagcaatatttttcaCAATTACCGAGAAATGTGACAATGAAGCTG
TATAAAATTTATGAAGCTGATTTTAAAGCTTTTGGATACTCGGCCGATGA
ATATCTGTAGATGCTAGATCACCATGGAGGAGGAAACTCTAAATTACAGA
GACTTTTCTTGGTGCTTCTCGGTGGGGTGATTGTTTTGTTGGCATTAGAA
GGATTGTCGATGGTCAGAAGTGAAGCAAGGTGTACTATACAACAAGTTCC
AGTTGTGATACAACAAGGAGATAGGCGGGAAAAGGTTCCAAGAGAGTTTG
ATCTTCCAGACACTCATTCTGAACGACgtctaaaaacaacaaaaaccaca
agaaaaactgtcccaacgactgaagccaaaacaacaGCTGAACCTGTGAC
AGATGAAAACATAGCTACAGACACACCAGCACCAGTTATCGATCAGAATC
GCCAAACACAACTCCAGCGTCAACAACATTTGAAAGAGTTTTGCCAAAAC
AATCGAAGATTACGGACGGAAAAGTTCAAAATCCGAGATTTCCATTTCAT
ATATAGCGACAAAGCGTCCGCTCTATATTGTTATATCCCAAAAGTGGCTT
GCACTAATTGGAAAAAGGTGTTCCAAGTGATGGATGGGAATTATGAAACT
CCTTTAGATATCAAGGGTAAagaaaaagttcattatttaaaGTTCAATAC
TTTTGAGAAAACGAATTTAACTGAAATCGAGTGGCGTCGAAATTTGTATT
ATTCTTTCTTGTTCATACGGCACCCCTTTGAAAGGGTTTTATCAGCATAC
AGAAATAAGTTTCAAGATCCCTACAACGAACAGTACCAACGTGTGTACGG
CTCACGTGTTTTACGTCTGTTCCGTAAGAACCTTACGGAAGCCGAGTACA
AAGCCGGGAAGAACGTCACTTTCCGAGAATTCGCCGATTATGTTATCCGA
GTTCATACGAAACGAGAATTTGTAAACGAGCATTGGGACACGATGCATAA
TTTATGCCACCCTTGTCGTGTGAAGTATGATTATATTGGCTCAATGGACT
CACTTATCGAAGACTCGGAGACGGTTCTAAAAGAGATTGGTTGGTATAAT
cgagtcaaatttcccgccaAAGCAACGGATAAATACAAGAATAAATTACC
CACTTTGatgaagcaatatttttcaCAATTACCGAGAAATGTGACAATGA
AGCTGTATAAAATTTATGAAGCTGATTTTAAAGCTTTTGGATACTCGGCC
GATGAATATCTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000105_pilon | genome | sc0000105_pilon:555279..558703 + |
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