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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000103_pilon:1050135..1055535+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13214.3.p1 ID=MSTRG.13214.3.p1|Name=MSTRG.13214.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5401bp|location=Sequence derived from alignment at sc0000103_pilon:1050135..1055535+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGATTTGTAGCTTAATTTGGTGACACCAATATAAGTGCGAACGTCAATA
GTCAATAAAACTGAATGtacttaaaaagaggaaaatggTCGTCTATATAA
ACATCACGTACAGTAGTCAGTAGTATTACATTTTGATTAAGACAGTTACT
TGACTGGTCAACCACTATATAAATCGCAGGATCACAgatgaaattttaca
tttttgggCAGACAatattattgattttttgagTTCACTTAAATATTACA
AGGCTTTTCTAAAGGTGTGATCCAATTAGCCTCTGGACGTTACAAATCAA
AAACACATTGGTGGTTTGATAGTAAATTTTGACAAGATtattttgtttca
ttggattgtTGTTTTGTGATTGAGAAGCTGACAAAGTGAGATCGCTATGG
AAACTTCGACGCCATTTATGATTGAAGCCTATCTTGAATCGTTCAGGTAT
ATTGAAGAGTTTAGAATCTTAGAATGTAGCTCTGATCAGAAAGAATAGAC
CTTTAGTTGGTAGGGACGGCTAGTAATTGACTAGCCCTTGGTTAGTTCGT
AAGGATATGTTTGCAAACATTATCCATCCAAAAAGTATTTCTGGAAAATA
TTTTAGGAAAgttgtgaaaattctcaaattccCAAAGGATGAAATAAACA
GCGATATTCCGGTCTTCAAGATAGCCCCTGGTTCATTGTTCATTATAAGT
TAAGAAAAATGACCGGTATTATTTCGGAATATTACCGGGATGTTACAGTA
TTCTGTTACCTTAATATTCAGTATTCACAATCATATGTtgtgaatacacg
tttttttaagaaatgttTTGAAGCCTTccaatgttcttaatattttgagt
ttcaaacctaaaaatgtcctttacatattcttattttcaccattttgtga
gtaatcgcacgatgggttactttttcttatttggcgcgccctcaaagaga
gcaattaatcgttaattgcatcctgtagagatcgttaatcacactctcca
atgccgcgccaatgtttacaaaattgattttaatgttttttcttacattt
tttttgcatcgaacgttttaattgcattcgaaatttattttgtgagaaag
aaaatcaataaacaacaataaaataaagacataagagaagagaaaaaata
aaactctcagtgtaatttctgtatttACTTTCCTagctgggaaaaagtag
tgaaagccattgtgcgattagctcgtaatcacatgataacgagtacaatt
cgaaaattgcacgcatgattttttcgtttcataacaaaaaaatcactcgt
gcaattattctcgaattgcacgcgttatcatgtgattacatatactaatc
tTCTCCATTTTATTAAGAAATTTgggtccacaaagccttaaaatatcttt
aactcgttcttaacatttttgaacGACAGAGTGAAATCAactatttattc
tttttttataggaacaccAGTATGCTTGCTAAATCAGCATCCACTACTAA
GCTTTCAGCATGCTTCATTTGTGGTCAAGAAATCCCTCTCTCGGAACTCA
CAACACACGAAAAAGCATGCTTAGACACCATCAAGGCTAATGATACACAG
TACACGAGACAATCTGGGGACGACGGTTCATCAGATCACTCCTTCCCGAC
GGCTTATTCTAATCTCTCAACCCATTCTTCTTCGAGTGGCGATTCTGCCG
GTACCGAAAAGAAGTATTCGCAATGCTATATTTGTGGAACGGATGTCCCA
AGTTATTTAGCCTCTATTCACGAGAAGAATTGCAAAAAGAGCTGGGAAAC
AGGGCTACTAAATTCGATTTGTACACCAGCTCGAAAGAGTAAGTCAAAAA
GTAAGTGAAACTTCTACTCTACCTAAGTCGGAAAGTTTTCGAAACATtta
ttggtccagcgcgcagcagaatggacctttaaaaagcaactgattgaaaa
gattttgtctttgtcggggcctgtgcgcgcaataaattaacaagtccagg
ctaaaccaaccgccgatctagaatttttacccctcctacccgcgcgatgt
tttACCTATGtcttggattgaattggtagtagagtcaaatttcccggtta
gattaaagggttgtttcaggtagggtcaggtagggttagggctagggttg
gggatgggagttaacccctggttagggttttagcttccgggtagagtttg
gagtaaataccatgtttataaggaactttgaactccttagtgcagttgtg
actcgatggccgagtggttaaggcgctggcgttctaatTATATgtgcttt
gtatatagtgggttcgaatcccatcagcggcaaaagtttcgaaatttcgg
gaaatgcatcaaaaactgtCAAAACTTAGCAACataaagaaagtgtcaaa
gtgtcaaagaataaaAGCTCAGAGTAGAGGATGGGAAGGAAACTTTTTTG
CGTCAtttaaggaacccggtacgaacgacattcggttattgccacgtcag
ctggaccttcacgccgctccggcttcttgtttatttttgccccgctttaa
atgaaaatcttataCAAAGAATTACGTGTTATAATTCAAATCCTTCAATC
ATTTGTAAAAAGATCAGTTTTTCCGATGTATCGAAgtaacttttgaaaat
tctgatGATCATCATTTGACGTGTTGAAGTAGATCGGTATTCTTTCAGCT
GCGGTCTGAGTCAATTTAGGAGCTCCACTTGTCACCGCTATTTGCCAGAG
AGGCATACGAGCCTTTGGTGTGACCCGGCCAGCGGCGCACCGTAGCCAGA
TGTTCTACCTTTATGTTACAAATTGCTAAGAAATAGATTGGcacagtctg
ttcctctaaagaaccCTGCATTGTAGCACGcgtgcgtaatttgtcgttct
ttaaaccatatgtagttaattcctgtGATAAACAAATAAGAAGATTTCGT
AGGGGTTGACAAACCAACCGGGTAGGGGTTGTGGAGGgcgaaatttgtcg
tttttataaaatttgttgttctttttgtctacttttagtaaatgtaggat
tctttagataaacccacTCGGCATCATAAATTATATCATGTTCCATTCTC
TTTGTTTTCAGCTGATGTTTCGACGCTTTCAAGAAGCTCAAGCCGTGATA
ACATTTTACAAAAGCAAAATGACTTTTCCTTATCAACGCCAAACCTCACG
AAAGCCAAATCTACTACCAACTTACAGAATGCCAAAATGACGCCGACAAA
AAGCGACAAACCACGTCATTTACGATCAAACGGACGTAAAAGTACGTCAC
CTATGTCTCGGTCAACGACAAATTTATCGACGAAAACGACTTCTAAAGAT
TCGTTACTCTCATCTACCGAAAACCTTTCGAAGTCATCTCAAGATGTTCG
GGATGTTACCGATGCACCGAAACGCCGGAACACCGGAGATCCGCAATACG
TCATTTGTCAAATCTGCGGAAAACTGTATAGTAAGCATTCGATCAGTATA
CATCAGAGGAGTTGcgaaaaaatgtatcaaaaacaaaagagcGTGGGTAC
AAATGTAGactataaagtcaaaagtcgTTCACTTGTTGATCTAACGAAAA
CCAATAGCCGGCGAACACCAATCCCGACTTCAAAACCGAAATCGGAAAGG
AGACCTGCGTCGGCTAATCcgataaataaaatcaaaacgaaCTCTTTATC
TAGGAGTACGGGAAACTTAGCTCCAACTTCAACATATAGACGCCGATTAT
TAACATCCAATAAAAAGACAGTCGTAAATGGTGAAACAACAAATGAGTCA
TCAATGGCAAGCCCAATAAGTAAAAGTGAAATTGACATATCAACTACATC
GCCCGGATTACGGAAATGTTATTTATGTCGTCAGTTATACGGTACACGCT
CGTTACCCATTCACGAAAAACAGTGCCTCAAAAAATGGGAGCGAGCGCAA
GAAGACGAGCGCAAGCAACGGAAATCGAACGCGCGGACGGCCAAACAACA
AGATATACAAGTATCATCATTTGGACGAACAAAATTTGAAGAGGAAAATG
GGTTAAATTCGAAATCTGAGTCGGATCAAGAGGAGAATTATGATTTAGAA
TCGACCACTATTCAAAAGCCGATCATATCTCCATCAAAGATATTTGGTGT
CCCCTCGCCATTAAAGAAAGGTTTCACTGGCCCCGATACTGACGACTCGT
TAGATGAAGCCGATGGTAAGGCCAGTACCCTTGATAATGATAAGAACAAT
GGGAAAGTTTTAACGAACGGAGAGCCGGGACCTGAAAGACGTAAATCTGG
GAGCGGACCTAAATTCGTTGTCTGTATTTATTGTTCAAAACAATTTGGTC
AACACTCAATTTCTATTCACGagaaaagttgccgagagaaaatgaaaatc
gaaacaaaaacaaaagaaagaatggccacacaatctaaaataaaaaataa
taaaaaactcaGCCAAAGTGTTGGTGATATGACACTTTCTGACGCTTTTG
ATGTGACCACGAATGATATGTTACAATTGGTGAAATGTAATGAATGttta
aggaaatttttgaaatcagaCATCGAGAAACATAAAATACATTGCCGTGT
ATCTGTACTTTAAAACTTGCAGCGTGTCCTGAAGAAAGGAGGACAGAATT
TATATAACGTGGAATCCTCATAATTTATATACTAATATCATGactttatt
attcaatttcTTTCCCATCAAAACCTATTAAAACTATATTGGAAATTGAG
TATAATGTTGCCCGTGTGAATTAGGTTTAGACATTCTAGGGCGAAATTAT
TTTgccgtatttttgacaaaatctaCTGGATACCAAACTTTCTTATTTCT
GCTTTTCTAATTTTATAGGatcattttgaaattgaatactagaaaattat
tcttttggttagaagtttttttcaataaataataACCGGGCGAAGCAATT
CGTTTTTTGTGTAGTCCATATTTTGTTGTACAGTTAGCTCCTGCTAGTTT
GGAATCtgatttgttcgaattaaatataaattcgaattatagagagtatt
ttacgaGGATTTCCCTTAAAGGGGAATTATTTGTTCgtattatagaaaga
ttcgaattatggaagttcgaattagggagGGTCCActctatttgtttttt
taccTGGACAGTATTTTGGTTGTGTTTGTTTTCCAATTTTAGGGAAAATT
TGACACTCCTTGTTGTGAAAAGATAATATTGACATagattttgtttacaa
aaatcattaagaattattattagcaattaattgttattttactgtttatt
tattggtatttcattcaaattttacaaattggtAGATTATAGTTTCGTTT
TGTAATGTGTTTTTGGAAGAAAATAAACGATATCTTTCTctaaataaaga
a Coding sequence (CDS) from alignment at sc0000103_pilon:1050135..1055535+ >MSTRG.13214.3.p1 ID=MSTRG.13214.3.p1|Name=MSTRG.13214.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5823bp|location=Sequence derived from alignment at sc0000103_pilon:1050135..1055535+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACTTCGACGCCATTTATGATTGAAGCCTATCTTGAATCGTTCAG
gaacaccAGTATGCTTGCTAAATCAGCATCCACTACTAAGCTTTCAGCAT
GCTTCATTTGTGGTCAAGAAATCCCTCTCTCGGAACTCACAACACACGAA
AAAGCATGCTTAGACACCATCAAGGCTAATGATACACAGTACACGAGACA
ATCTGGGGACGACGGTTCATCAGATCACTCCTTCCCGACGGCTTATTCTA
ATCTCTCAACCCATTCTTCTTCGAGTGGCGATTCTGCCGGTACCGAAAAG
AAGTATTCGCAATGCTATATTTGTGGAACGGATGTCCCAAGTTATTTAGC
CTCTATTCACGAGAAGAATTGCAAAAAGAGCTGGGAAACAGGGCTACTAA
ATTCGATTTGTACACCAGCTCGAAAGAGTAAGTCAAAAACTGATGTTTCG
ACGCTTTCAAGAAGCTCAAGCCGTGATAACATTTTACAAAAGCAAAATGA
CTTTTCCTTATCAACGCCAAACCTCACGAAAGCCAAATCTACTACCAACT
TACAGAATGCCAAAATGACGCCGACAAAAAGCGACAAACCACGTCATTTA
CGATCAAACGGACGTAAAAGTACGTCACCTATGTCTCGGTCAACGACAAA
TTTATCGACGAAAACGACTTCTAAAGATTCGTTACTCTCATCTACCGAAA
ACCTTTCGAAGTCATCTCAAGATGTTCGGGATGTTACCGATGCACCGAAA
CGCCGGAACACCGGAGATCCGCAATACGTCATTTGTCAAATCTGCGGAAA
ACTGTATAGTAAGCATTCGATCAGTATACATCAGAGGAGTTGcgaaaaaa
tgtatcaaaaacaaaagagcGTGGGTACAAATGTAGactataaagtcaaa
agtcgTTCACTTGTTGATCTAACGAAAACCAATAGCCGGCGAACACCAAT
CCCGACTTCAAAACCGAAATCGGAAAGGAGACCTGCGTCGGCTAATCcga
taaataaaatcaaaacgaaCTCTTTATCTAGGAGTACGGGAAACTTAGCT
CCAACTTCAACATATAGACGCCGATTATTAACATCCAATAAAAAGACAGT
CGTAAATGGTGAAACAACAAATGAGTCATCAATGGCAAGCCCAATAAGTA
AAAGTGAAATTGACATATCAACTACATCGCCCGGATTACGGAAATGTTAT
TTATGTCGTCAGTTATACGGTACACGCTCGTTACCCATTCACGAAAAACA
GTGCCTCAAAAAATGGGAGCGAGCGCAAGAAGACGAGCGCAAGCAACGGA
AATCGAACGCGCGGACGGCCAAACAACAAGATATACAAGTATCATCATTT
GGACGAACAAAATTTGAAGAGGAAAATGGGTTAAATTCGAAATCTGAGTC
GGATCAAGAGGAGAATTATGATTTAGAATCGACCACTATTCAAAAGCCGA
TCATATCTCCATCAAAGATATTTGGTGTCCCCTCGCCATTAAAGAAAGGT
TTCACTGGCCCCGATACTGACGACTCGTTAGATGAAGCCGATGGTAAGGC
CAGTACCCTTGATAATGATAAGAACAATGGGAAAGTTTTAACGAACGGAG
AGCCGGGACCTGAAAGACGTAAATCTGGGAGCGGACCTAAATTCGTTGTC
TGTATTTATTGTTCAAAACAATTTGGTCAACACTCAATTTCTATTCACGa
gaaaagttgccgagagaaaatgaaaatcgaaacaaaaacaaaagaaagaa
tggccacacaatctaaaataaaaaataataaaaaactcaGCCAAAGTGTT
GGTGATATGACACTTTCTGACGCTTTTGATGTGACCACGAATGATATGTT
ACAATTGGTGAAATGTAATGAATGtttaaggaaatttttgaaatcagaCA
TCGAGAAACATAAAATACATTGCCGTGTATCTGTACTTTAAATGGAAACT
TCGACGCCATTTATGATTGAAGCCTATCTTGAATCGTTCAGgaacaccAG
TATGCTTGCTAAATCAGCATCCACTACTAAGCTTTCAGCATGCTTCATTT
GTGGTCAAGAAATCCCTCTCTCGGAACTCACAACACACGAAAAAGCATGC
TTAGACACCATCAAGGCTAATGATACACAGTACACGAGACAATCTGGGGA
CGACGGTTCATCAGATCACTCCTTCCCGACGGCTTATTCTAATCTCTCAA
CCCATTCTTCTTCGAGTGGCGATTCTGCCGGTACCGAAAAGAAGTATTCG
CAATGCTATATTTGTGGAACGGATGTCCCAAGTTATTTAGCCTCTATTCA
CGAGAAGAATTGCAAAAAGAGCTGGGAAACAGGGCTACTAAATTCGATTT
GTACACCAGCTCGAAAGAGTAAGTCAAAAACTGATGTTTCGACGCTTTCA
AGAAGCTCAAGCCGTGATAACATTTTACAAAAGCAAAATGACTTTTCCTT
ATCAACGCCAAACCTCACGAAAGCCAAATCTACTACCAACTTACAGAATG
CCAAAATGACGCCGACAAAAAGCGACAAACCACGTCATTTACGATCAAAC
GGACGTAAAAGTACGTCACCTATGTCTCGGTCAACGACAAATTTATCGAC
GAAAACGACTTCTAAAGATTCGTTACTCTCATCTACCGAAAACCTTTCGA
AGTCATCTCAAGATGTTCGGGATGTTACCGATGCACCGAAACGCCGGAAC
ACCGGAGATCCGCAATACGTCATTTGTCAAATCTGCGGAAAACTGTATAG
TAAGCATTCGATCAGTATACATCAGAGGAGTTGcgaaaaaatgtatcaaa
aacaaaagagcGTGGGTACAAATGTAGactataaagtcaaaagtcgTTCA
CTTGTTGATCTAACGAAAACCAATAGCCGGCGAACACCAATCCCGACTTC
AAAACCGAAATCGGAAAGGAGACCTGCGTCGGCTAATCcgataaataaaa
tcaaaacgaaCTCTTTATCTAGGAGTACGGGAAACTTAGCTCCAACTTCA
ACATATAGACGCCGATTATTAACATCCAATAAAAAGACAGTCGTAAATGG
TGAAACAACAAATGAGTCATCAATGGCAAGCCCAATAAGTAAAAGTGAAA
TTGACATATCAACTACATCGCCCGGATTACGGAAATGTTATTTATGTCGT
CAGTTATACGGTACACGCTCGTTACCCATTCACGAAAAACAGTGCCTCAA
AAAATGGGAGCGAGCGCAAGAAGACGAGCGCAAGCAACGGAAATCGAACG
CGCGGACGGCCAAACAACAAGATATACAAGTATCATCATTTGGACGAACA
AAATTTGAAGAGGAAAATGGGTTAAATTCGAAATCTGAGTCGGATCAAGA
GGAGAATTATGATTTAGAATCGACCACTATTCAAAAGCCGATCATATCTC
CATCAAAGATATTTGGTGTCCCCTCGCCATTAAAGAAAGGTTTCACTGGC
CCCGATACTGACGACTCGTTAGATGAAGCCGATGGTAAGGCCAGTACCCT
TGATAATGATAAGAACAATGGGAAAGTTTTAACGAACGGAGAGCCGGGAC
CTGAAAGACGTAAATCTGGGAGCGGACCTAAATTCGTTGTCTGTATTTAT
TGTTCAAAACAATTTGGTCAACACTCAATTTCTATTCACGagaaaagttg
ccgagagaaaatgaaaatcgaaacaaaaacaaaagaaagaatggccacac
aatctaaaataaaaaataataaaaaactcaGCCAAAGTGTTGGTGATATG
ACACTTTCTGACGCTTTTGATGTGACCACGAATGATATGTTACAATTGGT
GAAATGTAATGAATGtttaaggaaatttttgaaatcagaCATCGAGAAAC
ATAAAATACATTGCCGTGTATCTGTACTTTAAATGGAAACTTCGACGCCA
TTTATGATTGAAGCCTATCTTGAATCGTTCAGgaacaccAGTATGCTTGC
TAAATCAGCATCCACTACTAAGCTTTCAGCATGCTTCATTTGTGGTCAAG
AAATCCCTCTCTCGGAACTCACAACACACGAAAAAGCATGCTTAGACACC
ATCAAGGCTAATGATACACAGTACACGAGACAATCTGGGGACGACGGTTC
ATCAGATCACTCCTTCCCGACGGCTTATTCTAATCTCTCAACCCATTCTT
CTTCGAGTGGCGATTCTGCCGGTACCGAAAAGAAGTATTCGCAATGCTAT
ATTTGTGGAACGGATGTCCCAAGTTATTTAGCCTCTATTCACGAGAAGAA
TTGCAAAAAGAGCTGGGAAACAGGGCTACTAAATTCGATTTGTACACCAG
CTCGAAAGAGTAAGTCAAAAACTGATGTTTCGACGCTTTCAAGAAGCTCA
AGCCGTGATAACATTTTACAAAAGCAAAATGACTTTTCCTTATCAACGCC
AAACCTCACGAAAGCCAAATCTACTACCAACTTACAGAATGCCAAAATGA
CGCCGACAAAAAGCGACAAACCACGTCATTTACGATCAAACGGACGTAAA
AGTACGTCACCTATGTCTCGGTCAACGACAAATTTATCGACGAAAACGAC
TTCTAAAGATTCGTTACTCTCATCTACCGAAAACCTTTCGAAGTCATCTC
AAGATGTTCGGGATGTTACCGATGCACCGAAACGCCGGAACACCGGAGAT
CCGCAATACGTCATTTGTCAAATCTGCGGAAAACTGTATAGTAAGCATTC
GATCAGTATACATCAGAGGAGTTGcgaaaaaatgtatcaaaaacaaaaga
gcGTGGGTACAAATGTAGactataaagtcaaaagtcgTTCACTTGTTGAT
CTAACGAAAACCAATAGCCGGCGAACACCAATCCCGACTTCAAAACCGAA
ATCGGAAAGGAGACCTGCGTCGGCTAATCcgataaataaaatcaaaacga
aCTCTTTATCTAGGAGTACGGGAAACTTAGCTCCAACTTCAACATATAGA
CGCCGATTATTAACATCCAATAAAAAGACAGTCGTAAATGGTGAAACAAC
AAATGAGTCATCAATGGCAAGCCCAATAAGTAAAAGTGAAATTGACATAT
CAACTACATCGCCCGGATTACGGAAATGTTATTTATGTCGTCAGTTATAC
GGTACACGCTCGTTACCCATTCACGAAAAACAGTGCCTCAAAAAATGGGA
GCGAGCGCAAGAAGACGAGCGCAAGCAACGGAAATCGAACGCGCGGACGG
CCAAACAACAAGATATACAAGTATCATCATTTGGACGAACAAAATTTGAA
GAGGAAAATGGGTTAAATTCGAAATCTGAGTCGGATCAAGAGGAGAATTA
TGATTTAGAATCGACCACTATTCAAAAGCCGATCATATCTCCATCAAAGA
TATTTGGTGTCCCCTCGCCATTAAAGAAAGGTTTCACTGGCCCCGATACT
GACGACTCGTTAGATGAAGCCGATGGTAAGGCCAGTACCCTTGATAATGA
TAAGAACAATGGGAAAGTTTTAACGAACGGAGAGCCGGGACCTGAAAGAC
GTAAATCTGGGAGCGGACCTAAATTCGTTGTCTGTATTTATTGTTCAAAA
CAATTTGGTCAACACTCAATTTCTATTCACGagaaaagttgccgagagaa
aatgaaaatcgaaacaaaaacaaaagaaagaatggccacacaatctaaaa
taaaaaataataaaaaactcaGCCAAAGTGTTGGTGATATGACACTTTCT
GACGCTTTTGATGTGACCACGAATGATATGTTACAATTGGTGAAATGTAA
TGAATGtttaaggaaatttttgaaatcagaCATCGAGAAACATAAAATAC
ATTGCCGTGTATCTGTACTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103_pilon | genome | sc0000103_pilon:1050135..1055535 + |
|
