MSTRG.13036.2.p1 (mRNA) -

Overview
NameMSTRG.13036.2.p1
Unique NameMSTRG.13036.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000101_pilon:598033..599725-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13036.2.p1 ID=MSTRG.13036.2.p1|Name=MSTRG.13036.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1693bp|location=Sequence derived from alignment at sc0000101_pilon:598033..599725- (Clytia hemisphaerica_ch_hm2_pilon)
GAAGTTTCTTTACCTTCATGTAGAGTACTGTTTTGTTTTAAACTGACGCT CGTAGATATTTTCAGAATGGAGGTAGGTATAATATTTAATTAAGTTAAAA TAAGATAACTTTAGATGAAACATTTACTTTTGAGTCTGTTTTTCAATGTC ATTCCTCAAACACAAAAACTGCCATTGGTGATTTAATACAAGAATGGTTT TTAACTTCACCTCTTCTTACTTCCAGGCTGACGATCAAAGACGAGATGAA GGTGAATCAGGAGGCTGCACAAATTCCTGGACTCGAAACCGAGGAGCGAT CTTTGAGAAAATTTTAATGATCGGGGCAGGAGTTGGGCAATATTTCTTTC AAAATAATGTTTTTATCTGCCCAGTGAAGGATTATACTGAATACGCCCTT CTCATTTTGATCACGCCCATGTTGACTTTATTCTGTGTTTCGATCATCAT GGGAACAAACTCATCGAAAATTGGAAATGTCTTGAAAAGCTGTTATAAAA CTAGACGATTGCGTATTGGACGTGTGTGCCACACAGAGCTAGTTTTCAAC TTTTTGTACTATATCTCAATCAGTTTAATCACACCGATGGTTTGGTTGAT CATGTGTTTTCTTCGGAAGGACATCTATCTGTGTGCTGTGGTGGGTCCTT TGATGTACAATGGTACTAAAGCAGCTCAGATACACTTGAATGATCACCGT GCGGCTTCAATGAAATGGGGTCTGGGTTTGCTACAAGGATCCGTTGGTGC AGTCATCGTCATCTATATTGTCAAAGAAGTATTGAAGCATAAAAGAAAAA ATAATGGTGCGTATTTTTCTTCTTTCATATTTCCACTGTCGAAGCCTCAA TCACAAATTTCATTCCTTCATTTATTCATTCATTCTGACAATTTCCGAAT GTCTTTAGGACACAATAAATTTGCCAATATTCTCCCAAGCTTGTATCCAG AGTCATTTGTACCCTTTTTTGATTTTACTTCGGGGCGTTTGACCTTGCGT GCCATCAAAATAATACAACAGCGGAACTAAGGGTTTGAGTTTAGTGAGTA CTATCAGATTAATGAAGTAGCGAACTATTAGAACTGGATTCAGTTTACTT TTCTCTTTTTTTAAACAGCCAATGAATTGAAGATTTATCAGAGATACCAA AAACGATGCGCTCAACAATTCTTCCATCAGTCAGCTAAACAATACATCCG TCACTCACTCAAAAACAACATTGAGAATTTATTCTCCACTAAAGATGTCC AGCAAAATAACAATACTTCTTCACCGTTGGATGTTTTGGAGAATCTGGAA TCCATCTGGGAATCAATGAGAGCTGAATATCCTGGTGTTTGTTTGGAATG TTTTGATGAAGGAAAAGGGGAGGACTTCTTTGATGGGAATGCCATTGAAT ACGAGAAAGAGAGTGGGTCAAGTAATGAGGAAGAAACAATCAAGTTGACA CTTAACGCTTGAAATTAATCTTAAAATTATCGCCCGTGATACTTAATGGT ACTTTGAGCCTAAAATTGTTCTTATCCTGTTCTTATTACTAGGGCAAAGC TGAGTTTTTTTAGGTTTGATATCCTACTTTTATCGATTTTTGTCCTTAAT TTGCTTAAAATTCAGTTATTCCAGGCTTCTTATTTTTCGAAATTTTTTTA GCCTCATTGTTTTTATAAAAGGAGTATAAAATTTTGATGCAGG

Coding sequence (CDS) from alignment at sc0000101_pilon:598033..599725-

>MSTRG.13036.2.p1 ID=MSTRG.13036.2.p1|Name=MSTRG.13036.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2790bp|location=Sequence derived from alignment at sc0000101_pilon:598033..599725- (Clytia hemisphaerica_ch_hm2_pilon)
CCAATGAATTGAAGATTTATCAGAGATACCAAAAACGATGCGCTCAACAA
TTCTTCCATCAGTCAGCTAAACAATACATCCGTCACTCACTCAAAAACAA
CATTGAGAATTTATTCTCCACTAAAGATGTCCAGCAAAATAACAATACTT
CTTCACCGTTGGATGTTTTGGAGAATCTGGAATCCATCTGGGAATCAATG
AGAGCTGAATATCCTGGTGTTTGTTTGGAATGTTTTGATGAAGGAAAAGG
GGAGGACTTCTTTGATGGGAATGCCATTGAATACGAGAAAGAGAGTGGGT
CAAGTAATGAGGAAGAAACAATCAAGTTGACACTTAACGCTTGAGCTGAC
GATCAAAGACGAGATGAAGGTGAATCAGGAGGCTGCACAAATTCCTGGAC
TCGAAACCGAGGAGCGATCTTTGAGAAAATTTTAATGATCGGGGCAGGAG
TTGGGCAATATTTCTTTCAAAATAATGTTTTTATCTGCCCAGTGAAGGAT
TATACTGAATACGCCCTTCTCATTTTGATCACGCCCATGTTGACTTTATT
CTGTGTTTCGATCATCATGGGAACAAACTCATCGAAAATTGGAAATGTCT
TGAAAAGCTGTTATAAAACTAGACGATTGCGTATTGGACGTGTGTGCCAC
ACAGAGCTAGTTTTCAACTTTTTGTACTATATCTCAATCAGTTTAATCAC
ACCGATGGTTTGGTTGATCATGTGTTTTCTTCGGAAGGACATCTATCTGT
GTGCTGTGGTGGGTCCTTTGATGTACAATGGTACTAAAGCAGCTCAGATA
CACTTGAATGATCACCGTGCGGCTTCAATGAAATGGGGTCTGGGTTTGCT
ACAAGGATCCGTTGGTGCAGTCATCGTCATCTATATTGTCAAAGAAGTAT
TGAAGCATAAAAGAAAAAATAATGATGGAGCCAATGAATTGAAGATTTAT
CAGAGATACCAAAAACGATGCGCTCAACAATTCTTCCATCAGTCAGCTAA
ACAATACATCCGTCACTCACTCAAAAACAACATTGAGAATTTATTCTCCA
CTAAAGATGTCCAGCAAAATAACAATACTTCTTCACCGTTGGATGTTTTG
GAGAATCTGGAATCCATCTGGGAATCAATGAGAGCTGAATATCCTGGTGT
TTGTTTGGAATGTTTTGATGAAGGAAAAGGGGAGGACTTCTTTGATGGGA
ATGCCATTGAATACGAGAAAGAGAGTGGGTCAAGTAATGAGGAAGAAACA
ATCAAGTTGACACTTAACGCTTGAGCTGACGATCAAAGACGAGATGAAGG
TGAATCAGGAGGCTGCACAAATTCCTGGACTCGAAACCGAGGAGCGATCT
TTGAGAAAATTTTAATGATCGGGGCAGGAGTTGGGCAATATTTCTTTCAA
AATAATGTTTTTATCTGCCCAGTGAAGGATTATACTGAATACGCCCTTCT
CATTTTGATCACGCCCATGTTGACTTTATTCTGTGTTTCGATCATCATGG
GAACAAACTCATCGAAAATTGGAAATGTCTTGAAAAGCTGTTATAAAACT
AGACGATTGCGTATTGGACGTGTGTGCCACACAGAGCTAGTTTTCAACTT
TTTGTACTATATCTCAATCAGTTTAATCACACCGATGGTTTGGTTGATCA
TGTGTTTTCTTCGGAAGGACATCTATCTGTGTGCTGTGGTGGGTCCTTTG
ATGTACAATGGTACTAAAGCAGCTCAGATACACTTGAATGATCACCGTGC
GGCTTCAATGAAATGGGGTCTGGGTTTGCTACAAGGATCCGTTGGTGCAG
TCATCGTCATCTATATTGTCAAAGAAGTATTGAAGCATAAAAGAAAAAAT
AATGATGGAGCCAATGAATTGAAGATTTATCAGAGATACCAAAAACGATG
CGCTCAACAATTCTTCCATCAGTCAGCTAAACAATACATCCGTCACTCAC
TCAAAAACAACATTGAGAATTTATTCTCCACTAAAGATGTCCAGCAAAAT
AACAATACTTCTTCACCGTTGGATGTTTTGGAGAATCTGGAATCCATCTG
GGAATCAATGAGAGCTGAATATCCTGGTGTTTGTTTGGAATGTTTTGATG
AAGGAAAAGGGGAGGACTTCTTTGATGGGAATGCCATTGAATACGAGAAA
GAGAGTGGGTCAAGTAATGAGGAAGAAACAATCAAGTTGACACTTAACGC
TTGAGCTGACGATCAAAGACGAGATGAAGGTGAATCAGGAGGCTGCACAA
ATTCCTGGACTCGAAACCGAGGAGCGATCTTTGAGAAAATTTTAATGATC
GGGGCAGGAGTTGGGCAATATTTCTTTCAAAATAATGTTTTTATCTGCCC
AGTGAAGGATTATACTGAATACGCCCTTCTCATTTTGATCACGCCCATGT
TGACTTTATTCTGTGTTTCGATCATCATGGGAACAAACTCATCGAAAATT
GGAAATGTCTTGAAAAGCTGTTATAAAACTAGACGATTGCGTATTGGACG
TGTGTGCCACACAGAGCTAGTTTTCAACTTTTTGTACTATATCTCAATCA
GTTTAATCACACCGATGGTTTGGTTGATCATGTGTTTTCTTCGGAAGGAC
ATCTATCTGTGTGCTGTGGTGGGTCCTTTGATGTACAATGGTACTAAAGC
AGCTCAGATACACTTGAATGATCACCGTGCGGCTTCAATGAAATGGGGTC
TGGGTTTGCTACAAGGATCCGTTGGTGCAGTCATCGTCATCTATATTGTC
AAAGAAGTATTGAAGCATAAAAGAAAAAATAATGATGGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13036MSTRG.13036Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13036.2.p1MSTRG.13036.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13036.2.p1.exon3MSTRG.13036.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13036.2.p1.exon2MSTRG.13036.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13036.2.p1.exon1MSTRG.13036.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101_pilongenomesc0000101_pilon:598033..599725 -