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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:1190810..1199309+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12985.1.p1 ID=MSTRG.12985.1.p1|Name=MSTRG.12985.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8500bp|location=Sequence derived from alignment at sc0000100_pilon:1190810..1199309+ (Clytia hemisphaerica_ch_hm2_pilon)
GTACTAGTGGAGGATTTCTTTATCGTTTTGGTTGTTCTTTCTGGTTGGTA
TCTAAAATAATGGAATTAATACCGTATTTatttgtttgcttgtttgttAA
CTCAATCTATTTTCTTTTCCATCTTTGTACAATCGACAGACGTGCTTCTC
CGGGTTTCTACAAATGCTTCAGAGCGATCTTTATCCCTTGTAAGTTTTAA
GAATCcttttaagaaagaaatacTTTACACATGAACTTTAGCATATCCTT
CTCAAATCGAATCGCTCTTAATATAGTAGCCAAAAGTTAAGTTAATTTTA
GTTAAAATACACGTGTTcagatgctcttaacttttagagttttaagccta
aaaatgttcttaacatgttcttatatttCAGCCATTGAAATCTCATCTTA
TGATATATTTTGCTCTTATAAACGTGCATCACTTTTAGAACAAAGCTTCA
AGGTACATTGAATCGGAAGTTTTGAGGTAAAGACATTATCCGGATATAGT
TACATTATCAGTATGTACTATCTGTTCAATAATAGTGAACATAAATAGTC
AATTCCAGAAGAAATCAGCactttttgatacatttttctttttcaaagca
aCGGCAATACACCCTTGTCTCCCGGCCCaggtggaacttcttcccacaat
ggggatgaaaattgTCTAACGAAATCCGCATGGGAATagtaattctattg
ttctcatgtcaaaaaatcgaatgggGATGGGTTTGGAGTGGAATTTTTCT
ACATTGAATATCTGATGGAAATTAAAATAACAAGTCAAGTTACCATATAT
TAGGGCTGAAATTGttgggtattttcccaccaggAGAAAGTTTAGCCAAA
CATTCCATCTGGTCTATTACGCGGAGGTCTAACAatattcatttcaaatt
ttcagatttgatgGTAAGTGACATTGTATTTGTGGTGATCTTTCTCTTCG
TCCCATCTTTACCACAAGCGTACTACCTTGTCTCATTTTCGTGGTTTGCA
CTGTTACTTATAAATTGGAGTTTCATAAATTGTTGGAATCGTTGGGAAGG
AATAAGAATCATAAAAGAATGGGGCACAGATGACAACGGTAATCCAAAAT
GTACCAAGCGGTATAGACACTCGATGAAAGAAATCAAGGAAATTCTGGAT
GAAAATTTACCAAAGGAGCCGAAAGTGATTGTTCAATGCGAAGCTGTGGA
ACCTCGAACTTCGTGCTGCAGAAAACAACGCGTTAGTTGGAGCAATCAGA
AAGAGTTTGAATTTCAACATTGGATCGATGTGACTGAACAACATTTGGTG
AAATCACAAATTGAAGAAGCGATTTTTGgtgaattgaaaattgatttcga
ATTTGATGACGAAGAAACGAAGGAATCATATGAACAACACGTTCAGAATC
TTGTAAAAGAAGCAAAGCAACATTCTCCACACGCTCAAGTCAACGTCAAG
CAACTTTTCCAAGTCGGTGAAAAAGATATCAAAACCTACAGACGGTCGTT
TTATGGCAAGAAGGCTCTTTTTGGAAGACCATGGGTGTGTCTTCAATGCG
TTTTTCCTCAGATCGAACTTTcgttcaaaatattgaaatggtttctcgaa
aaaattggcttcaaaagtttattgaccaaagaaattgtaatcaGAAAAGT
AATATCTGACAGAAATATTGTATCTGTATAGCATTTGTGATCAATAATTT
TATACCATTTTGAATAGTATAACATGGCGAAGACCTGTTCCACGGGACGT
TACGGTCTTTGTGTCTTAAACATTAAGCTATTCAACTTACAGTAAACCAA
TCAATCTGCTATACAGACCTGTTaggaaaaatttatttacactATAGCTC
TTAAAACATCCATCCACGAAagttagaatttagaaaatatacAAACTCTT
TCAAAATCAGCCTCTTGAAAACACTTTTCATAAAAGCCAGTAAGTTCGGT
TGAAGCTGCGActgctttcatttttctgtgattttcaGACTTTACTAAAT
TAACTAATTATTCGCATTCAATAACTTAAATGAGGCCTTTGTGAAATCTT
AAGCTAATAGCATACTCATTTTCGATTaagcatttttctttaaaaagggT
GAATTTTTTAGCTATTCTTTCACAAATTCCACTTTTTTACTGGAATGAGA
CTTCAATTTATAAATGGTCACTCTAAAAGACGAACACTTCTCATTAGCGG
ACAATTCAATTTTCACCGGACGTTTTCTAGTccaatcctcataaaaaaga
ttctaaaaggcggacactcaactAGCGGACCCTCCAATTAGCAGAAAAGC
TTTTTGCAAGAAATGACCAGAACCCTACTTTCTCTTCTCAAATTAGCGGA
CATCGATGGTCAAACTGATAACTGACTTTAAAAGAATTAGACAGGGTTGA
TTTATCCAAACTATTTATTTCTTAAACACTTCAATGAGTTTCATATCATT
GAACAAATTACTCATAGAAGTTTGGTGAATTTGCATAACAATGATATATA
ACAGGGACCCCAAGACTAACGATTCATAAAAAAGCAAATTGTTGCATTTG
AATAATTATTTTCTTGTCATCTCCATAAAAAAGCACTTTGGACCAAACTT
TTACATATTTAACCCTTTAGTAGTATCTTGTACCAAAATTAGAGCACaga
attgaaaagtttctaaaaggcggacacttctaaatAGCAGACAATAACCC
TATTCCCAAATAGTGTCTATAGGTATCACTATATGAAGATATCAACTTGG
TATCATAGCCATTTTGAAATAACCACATTCCTAATCAAGGAAACGTAGTA
ACTATTTCGAGCCTTTAAATGGAGAAAATCAAGagaaaagaatatatttt
tacCATTCAAGAGCACTATTAGAcgactttttttattgttttacttGTTA
TTTTCTTGATACTGAAATAAATGGAAATAGCAATTTATATTTCAAtgtgc
ttcatttttcattcgttGTTCTTCAAGTTCCATATTTGCACCATTGACAA
ATGTGCTTCTCTAGGTTGCACTTCAAAGTGGTCTTTATTCTTCGTAAGTT
TTAAgatgtttttgagaaagaaatatttaagggctctgaccatagtgagt
TTTTAATATAGTCATTCAAAATAATCGAAACTTTATAAcattaaaatcat
caaagatatctgaagaaatatttttgtcatttttctgaGGGCGTGTTTTC
TCTATTTTTAATGACAATCTTTGTGCATCGAGAGCGTTTTTGGCCAATAA
AGTCtagagaaaattttctccgtcatcGTTTAATAATGGTCGTCTTCGTC
TCCGTAGTCACTCATATTCTACTActcagtggcggcctggcagggggtgc
agggtgtgcagtgcaccacccagaaagacctgagaggggcgccaacaaag
cttttcaagggggcgccaaatttatttttgatgtttcgttgggcgatttg
gcgctctttgacacgtttttagcgccttctataagtgcaatgtgaatttt
ttttcgcctgcggcgcttcgttttattttacgaattttttcaaaactact
atcaacattgaattgcgaaaagtcaaagcaagagaagtgttgtgtgtcca
ccaggggttaaagaggatacTCCTCCCAAAAATGAGAGATTTatcgaaac
tgctcgctgtggtttatgtggtcttatgcggactaactttctccttttta
gaatatcttttaagctgtttgacatTTCTTACaccatttttttttgcctg
cggcgccagaattacaaataacccttattcctgccaactttcgaattttt
ggggactctttcagccattgatctttaatggagagtaaagtaagactaGG
AAATAACAAGTAAacagatatcaagttatcaataccaccaccttcgtata
aataaaagtttgttaactcagattccgggcgttattttcaaccagtcact
gctcttacagtttcatattttcacttaatggtagatgggcgcaaataagg
acaaaaataccaggggcgccaatttcatagtttgcaccaccaaaaaaatt
aagccaggccgctactgacAATACAATACACAAAACGATACCGCATTAAC
TTAGAGGATTTTTGCTCTTTCAATAATTTGCAAAAGTAGGTAGCTCTAAA
ACATTTTGTATACATGCAGCATCGAACAATTAAAAAGTAATCCTCGTAGA
TAATggatgcacatgatgcgttttcaagcaatctagacattttaaatctc
aaaaattttctcttgagcgaaactcttggaacgccgcaccgggtaaGGCA
GGTACGTCACTCGTCGTAACcgatttttgccaacaaatggtcagtgctaa
ataaaatcaaaattttcaaaagaattgtgtGACTAAACAAGGCAAGCTTG
GCTatcaatagcgtattaaggccgttttcaGTCATAAAAGagcgaaaatt
gacaaaaaatttcgcgctcgcttcgctcgcctttattcccttgagaacgg
accgaatctgaaacatgtcgggaaaaatcaaaatataatagccgcattct
ttttcaccgtccaacacaTTTCCTTCCATCAGATAGGGATCAAACATTGG
AATTTGCGTCCTCTGGTTGTACTACCACTCTACTTCTTCGAAGCTTGTTT
TGAAGTATACGGCTTCTCAAACTATGATTGCCCTAACctcaatttaaaat
taaaaaagacttcTTAAGGGTCTGCGAGGAAAAAATCCCACACCAAAGGC
CCACCCTAAGATAAGAGGGTAgttctttgtaactttggcgCGCCAGACCT
AAAACATTGCTTTATTTAAGCTCAAATAGATGTAAAAGATGCCTTAAAAG
GTCGACcctatcgagaataaggtcacaaaactgcagaaaacttcaTATTG
ACGAAGATGTTTggcataagaataggtcaaactGCTTAAAGGAAACCATA
AAAAGGTaatatttagcccaataaggtcaaaATTGCTTTAATCAAAGATA
TAAAAGCAAAATCGACGCGTGAAcctgaaaatggtttttttcgcgcatga
atacgtgaattggaaaaattttgtgcgtgaatacgtgaattgagggtctc
CTCAGTGTTAGAAATCTAcccgtccaacctaatttaAATTGCTTCCAAAT
cttttgtggttgtaagatttcgagGGTATTTAACTTTgatctcaaatatt
atgactttgattatAAGAAGAATATTACTACATTTCAATATGGTTTCGTC
GCTTTGGGACTAAGACTCGATTGCCAACTTATTAGCGGAAAAACACCAGG
ACtccgggtagttgaaaaatgaacttcGGATAAAAAACTAGTTTCCCTAA
TCTCATATCggctatatttgaaaaaatagtaaaacTTAAGTTTTTAGCAA
TACGCATATTTTAGATAGTGTATATTACTCTTCTTTCAAATCACCTTAAA
CAATAattatttagaatttatttttgaaatatcgtAGTAGTAGTAGTGTT
CCAAGTTTAGTCTCGCCACAGAAGTTGCCTCTAACATTTTTCTGTAATGT
TGGCAAGAGATCAAGATTCTACCtttacacattttttcttttaacgTTAC
AAAATGACAATTACAAActtttcattggaaaatcttcttctttttatctt
cttctgttctgaaacatttctttatgtctttcGACGTACGTAATACAGAG
AACTTTGGGCTATGCTTGATTATTCGCTGGGGCAACAGTTATGATGATAT
AATTAACATGTTGTAATTAACATTTATAGATTGtattttaagtcattttt
gaACAATCACATTCCTAATCAAGGAAATGTAAATattatggagaaaaaaa
ttgaatagaaaagatTGTATTTAACACTCGAAAGTACTAGTGGAGgattt
ttttatagttttagTTGTTCTTTCTGAGTTGGTATTCAAAATAATGGAAT
TTGTAGCGTATCTATTTGTTTGCTCTACTTTTAACTTATTCTATTTCATC
TTCCATCTTTGTACAATCAACAGAAGTGCTTCTCCGCGTTTTTACAAATG
CTTCAGAGCGATCTTTATCCCttgtaagttttaaaaattcttttaagaaa
gaaatacTTTACATATGAAGCTTAAATATATCCTTCTCAAATCAAATCGC
TCTTAATGTAGTAGCCAAAAGTTAAGTTAAGTTAAGTTaaatcatacacg
ttttttataagaacattcaaaattttgaaagtcttcagatactcttaact
ttttgagttttaagcctaaaaaatgtttttatatttcagCCATCGAAGTT
TCATTTTCtcatatactttgttcttataaaaaacttgtatcGCTTTTAAA
ATATACCTTCAAGGTAcaaagaatttgaatttttagaaCTAAAGACCTGA
TTCTTActaaactagccataactttcattaaggtgcctccgcagcaaaac
gaacacatagagttgaatttgcgttcaaaaggatcttagccctacagtaa
tttttgttaagagtgacctctcatctgagacaaaattctttcaaatgcta
acaaatgtgtcaagggagtgatttacagtctacttagagtgacatccgtg
ccttgtcttacatgttttttataagaacaatttcataagaatacgaggct
gaaatttggccgaaacctaagaacaaattaaaaagaatctgaacctcaga
tttcagaaattactgagaagtacatgtttccattttaattaatattgaca
tttaaaggctgaaaaactcatataaatttaagagcagccgagccagaatc
atatgacttactggtttttcctataaaaagcgtatatatctgaagatact
gttcttcatatgttattttactaatgtacacgtttagcaacataaatGTT
CGAGTACTATAAgtaaagtaatatttttaacctatgaagagcgctttata
actacttgtggtataaaaaggaaatttcccagaaaagggaatttccttac
attcatttaactctccagggataagaaaaagacaaactgacatttcaaaa
tatataatcagatcaaaataactccggaaaagtatttttgatgatgataa
aacaatagagagaccgttagataagaatgataccgttaagcggaactaaa
atactgaaaaacgcgcgcaaaattatgagatgtttgcccaacttccttat
gcgtgaagctatgaatgccatcctcagaagctttaggcttcctccaGTGG
CAATGATAGTAACTTTCCAAAGAAATCGGCactttttgatacatttttct
tttttaaaccgACGACATACACCCTTATCTctcagccccagtggaacttc
ttcttttggagtgcaatttttctccaTCTAATTTTAGAAGGGAATGAAAA
TAAGTAAATTTTGCAGTGAATTTTCTAGACTGAAATTGTTGGGTATTTTC
TCACCGGGGACATTATTTTGTCACATGGAGGTCTAAcaatatttatttca
aattttcagatttgatgGTATGTGACATTGTATTTGTGGTTATCTTTCTC
TTCGTCCCATCTTTACCACAAGCGTACTACCTTGTCTCGTTTTCGTGGTT
TGCACTGTTACTTATGAATTGGAGTTGCGTAAATTGTTGTAATCGTTGGG
AAGGAATAAGAATCATACAAGAATGGGGCAGAGATGATAACGGTAATCCG
AAATGTACCAAGCAGTATAGAGAATCAATGAAAGAAATCAAGGAAATTCT
GGATGAAAATTTACCAAAGGACCCAAAAGTGATTGTCCAATGCGAGGCTG
CGGAACCTCAAACTTCATGCTGCAGAAAACAAAGAGTTATTTGGAGCAAT
CAGAAAGAGTTTGAGTTTCGACATTGGATCGATGTGACTGAACAATATTT
GGTGAAATCACAAATCCAAGAAGCGATTTTTGgtgaattgaaaattgatt
tcgaATTTGATGACGAAGAAACCAAAGAATCGTTTGAACAACACGTTCAG
AATCTTGTAAAAGAAGTAAAGCAACATTCTCCAAACGCTCAAGTCAACAT
CAAACAAATTTTCCAAGTCCGTGAAAAAGATATCAAAACCTACAGACAGT
CATTTTATGGAAAGAAGGCTCTTTTTAGAGAACCATTCGTTTGCCTTCAA
TGCATTTTCCCTCAAATTGAACTTTcgtttaaaatattgaaatagttttt
cgaaaaaactggcttcaaaagtttattgaccaaagaaattgtaatcaGAA
AAGTAATATCTGATAGAAATATTGTAGCTGTATAGCATTTGTGATAAATA
ATTTTGTACCATTTTGAATGATATAACAGAGTGGAGACTATCTGTACTAA
TGGAATGTCCCAGGGACATTACTGTCTTTGTGTTTAAAATATTAAGCGTC
CAGGAAACACGCTACTCTTTTTATCAGAAACAACAAACTCGGCTAAAGCT
TTTCctgtttttgtgattttcaggCACAGACGttaaattattctaattat
Coding sequence (CDS) from alignment at sc0000100_pilon:1190810..1199309+ >MSTRG.12985.1.p1 ID=MSTRG.12985.1.p1|Name=MSTRG.12985.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000100_pilon:1190810..1199309+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTAGTGGAGGATTTCTTTATCGTTTTGGTTGTTCTTTCTGGTTGGTATC
TAAAATAATGGAATTAATACCGTATTTatttgtttgcttgtttgttAACT
CAATCTATTTTCTTTTCCATCTTTGTACAATCGACAGACGTGCTTCTCCG
GGTTTCTACAAATGCTTCAGAGCGATCTTTATCCCTTatttgatgGTATG
TGACATTGTATTTGTGGTTATCTTTCTCTTCGTCCCATCTTTACCACAAG
CGTACTACCTTGTCTCGTTTTCGTGGTTTGCACTGTTACTTATGAATTGG
AGTTGCGTAAATTGTTGTAATCGTTGGGAAGGAATAAGAATCATACAAGA
ATGGGGCAGAGATGATAACGGTAATCCGAAATGTACCAAGCAGTATAGAG
AATCAATGAAAGAAATCAAGGAAATTCTGGATGAAAATTTACCAAAGGAC
CCAAAAGTGATTGTCCAATGCGAGGCTGCGGAACCTCAAACTTCATGCTG
CAGAAAACAAAGAGTTATTTGGAGCAATCAGAAAGAGTTTGAGTTTCGAC
ATTGGATCGATGTGACTGAACAATATTTGGTGAAATCACAAATCCAAGAA
GCGATTTTTGgtgaattgaaaattgatttcgaATTTGATGACGAAGAAAC
CAAAGAATCGTTTGAACAACACGTTCAGAATCTTGTAAAAGAAGTAAAGC
AACATTCTCCAAACGCTCAAGTCAACATCAAACAAATTTTCCAAGTCCGT
GAAAAAGATATCAAAACCTACAGACAGTCATTTTATGGAAAGAAGGCTCT
TTTTAGAGAACCATTCGTTTGCCTTCAATGCATTTTCCCTCAAATTGAAC
TTTcgtttaaaatattgaaatagACTAGTGGAGGATTTCTTTATCGTTTT
GGTTGTTCTTTCTGGTTGGTATCTAAAATAATGGAATTAATACCGTATTT
atttgtttgcttgtttgttAACTCAATCTATTTTCTTTTCCATCTTTGTA
CAATCGACAGACGTGCTTCTCCGGGTTTCTACAAATGCTTCAGAGCGATC
TTTATCCCTTatttgatgGTATGTGACATTGTATTTGTGGTTATCTTTCT
CTTCGTCCCATCTTTACCACAAGCGTACTACCTTGTCTCGTTTTCGTGGT
TTGCACTGTTACTTATGAATTGGAGTTGCGTAAATTGTTGTAATCGTTGG
GAAGGAATAAGAATCATACAAGAATGGGGCAGAGATGATAACGGTAATCC
GAAATGTACCAAGCAGTATAGAGAATCAATGAAAGAAATCAAGGAAATTC
TGGATGAAAATTTACCAAAGGACCCAAAAGTGATTGTCCAATGCGAGGCT
GCGGAACCTCAAACTTCATGCTGCAGAAAACAAAGAGTTATTTGGAGCAA
TCAGAAAGAGTTTGAGTTTCGACATTGGATCGATGTGACTGAACAATATT
TGGTGAAATCACAAATCCAAGAAGCGATTTTTGgtgaattgaaaattgat
ttcgaATTTGATGACGAAGAAACCAAAGAATCGTTTGAACAACACGTTCA
GAATCTTGTAAAAGAAGTAAAGCAACATTCTCCAAACGCTCAAGTCAACA
TCAAACAAATTTTCCAAGTCCGTGAAAAAGATATCAAAACCTACAGACAG
TCATTTTATGGAAAGAAGGCTCTTTTTAGAGAACCATTCGTTTGCCTTCA
ATGCATTTTCCCTCAAATTGAACTTTcgtttaaaatattgaaatag
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:1190810..1199309 + |
|
