MSTRG.12950.1.p1 (mRNA) -

Overview
NameMSTRG.12950.1.p1
Unique NameMSTRG.12950.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000100_pilon:707224..709184+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12950.1.p1 ID=MSTRG.12950.1.p1|Name=MSTRG.12950.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1961bp|location=Sequence derived from alignment at sc0000100_pilon:707224..709184+ (Clytia hemisphaerica_ch_hm2_pilon)
TGGCTGGTGAGCAAATAGCAGCAAATTATGAAAACTGGTTACGTCTGATG ACATTGATCCATTATGTTGGTttcgaaatttgtaaaaatattttacataa cATTGAAAAATTGCCTGTGAATGGTGCACAGTTATATTTAGCATTGTTTC GTCGGCAAAGAGAATTCAACAAATTATTACGAAAACAAGTGTTACACCAA GATCAATTCGATTTGATTTTCCCTGCCAATGGGTCAACTGATATTACACA ATTCGATATCACTTTGTTTTCTCTCGTCATTACTGTAATgtttggaaaaa agaaatacaaagtAATTGTTAACGAGTTAAAGAAATGGAGAAATGAGGAA TTTCATCAAGGAGAAATTCTTATGAATCAGGTGGATTTTAATGCAAAGTG GAATGCTTTTCTTTTATTGGCTACTCCTTATGGTGTCAATGTTGGAAAGT TTGTTGATTTGAAGACTTGTGCCATGGATAAAATATCACAACACAATAAC AGGtattaaaaattcttaaaaacagctttgaaggttttatttttacataa ctgctcccgtttcatatcaagcacatattttatatcaggacagtgtctgc ctattgttatattatgctgatatatgcaaaaaaaatgtttttcttttcct ttttctgaccaatcttgctccatactcgtgtcaatccaatgtgaaaaagc ttgtgaattaaaagttatgagtaagcaaacgatatcactcttatttaaaa acaaaacctttaaattttcaatgagtaccttattggtatatattttcgcg tgttacaaattttcgcgggtacttaatttcgcgagttttttggtcaattt tcgcgaaatttaatactgtttaaatttttcaaaattacaaaatcgcgaaa ttaaattcgcgggaaaaattttttcttagtattttgttagtttttttaca tcaaaaacgttgtgtttcaagcaaaatcagtctttttctagctttatatt cccactttctgaaaatacctagtttagtgaatcgcgaaatttaatacacg cgaaaaatttccagaagtcggcaaacgcgaaatttaatacacgcgaaaca cgttttttcgataaaatttgtaacacgcgaaaatatataccaataagggc agaagaagaaaatattgaagTCATTATATCTTGATCTGCTTCGTAACATT AATATTCTCATTTTATTAGCACCCTCTGTAGTATGGATTTCAACTGTATC CCTAATTACTATGGGTAACCATTTTGGGTCTAATCATTCTCAACACCCAA ACACTTGGGGCAGTTTGAATATGATGGGTTTTGATATCTGACACTAAACC AGTTTGGGTTGCTAGAAAATACTAAGGGCGATGGACGCCCCTACAGTTAG TCGCACTAGCGTCCCACcgaaatgcatatcaaagattaattcTGCGAAAG CGCtgtatcgtttacttgactcgcaagcaataaaaatgctttcccggaaa ttttgccggacctcaaacacatGTGCAGAATTacttttactttagcgtat aaacaaggccttaaaaattgaagcgCtgtctcgggaattgaatgaaaaaa tttggttggttgatacaCATATCATTTTAAGTTTACAAGTTTtAattaat tgtcttgggaacttgaacttgattcaggtaactctcatccttgttgttgc aaatacaccctgtagatgactgatgttgtttttttctgaaagcttgattt cctagtgtgactaactgccctatatttatttatttaggtCCTAGGCTGCG TGCATCCccagaattgattttgatatcaaATCATATTAgagggatgcgtg cagcctagagGTGTCCTTGAATTAATTAATTGTGCCCGTCTGCTTATTGG TTTCTATCTGGTGTCTGTCAGTGATCGCATAACGTATtcaattttcagat ttatttatgcc

Coding sequence (CDS) from alignment at sc0000100_pilon:707224..709184+

>MSTRG.12950.1.p1 ID=MSTRG.12950.1.p1|Name=MSTRG.12950.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1026bp|location=Sequence derived from alignment at sc0000100_pilon:707224..709184+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTGGTGAGCAAATAGCAGCAAATTATGAAAACTGGTTACGTCTGATGAC
ATTGATCCATTATGTTGGTttcgaaatttgtaaaaatattttacataacA
TTGAAAAATTGCCTGTGAATGGTGCACAGTTATATTTAGCATTGTTTCGT
CGGCAAAGAGAATTCAACAAATTATTACGAAAACAAGTGTTACACCAAGA
TCAATTCGATTTGATTTTCCCTGCCAATGGGTCAACTGATATTACACAAT
TCGATATCACTTTGTTTTCTCTCGTCATTACTGTAATgtttggaaaaaag
aaatacaaagtAATTGTTAACGAGTTAAAGAAATGGAGAAATGAGGAATT
TCATCAAGGAGAAATTCTTATGAATCAGGTGGATTTTAATGCAAAGTGGA
ATGCTTTTCTTTTATTGGCTACTCCTTATGGTGTCAATGTTGGAAAGTTT
GTTGATTTGAAGACTTGTGCCATGGATAAAATATCACAACACAATAACAG
atttatttatgccGCTGGTGAGCAAATAGCAGCAAATTATGAAAACTGGT
TACGTCTGATGACATTGATCCATTATGTTGGTttcgaaatttgtaaaaat
attttacataacATTGAAAAATTGCCTGTGAATGGTGCACAGTTATATTT
AGCATTGTTTCGTCGGCAAAGAGAATTCAACAAATTATTACGAAAACAAG
TGTTACACCAAGATCAATTCGATTTGATTTTCCCTGCCAATGGGTCAACT
GATATTACACAATTCGATATCACTTTGTTTTCTCTCGTCATTACTGTAAT
gtttggaaaaaagaaatacaaagtAATTGTTAACGAGTTAAAGAAATGGA
GAAATGAGGAATTTCATCAAGGAGAAATTCTTATGAATCAGGTGGATTTT
AATGCAAAGTGGAATGCTTTTCTTTTATTGGCTACTCCTTATGGTGTCAA
TGTTGGAAAGTTTGTTGATTTGAAGACTTGTGCCATGGATAAAATATCAC
AACACAATAACAGatttatttatgcc
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12950MSTRG.12950Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12950.1.p1.exon1MSTRG.12950.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12950.1.p1.exon2MSTRG.12950.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12950.1.p1MSTRG.12950.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100_pilongenomesc0000100_pilon:707224..709184 +