|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000100_pilon:595597..601892- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12943.1.p1 ID=MSTRG.12943.1.p1|Name=MSTRG.12943.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6296bp|location=Sequence derived from alignment at sc0000100_pilon:595597..601892- (Clytia hemisphaerica_ch_hm2_pilon)
ATCTTATTGATAAAAACAAATAGTATGGAATTCAAAATGGTAGACTTGTT
GCGACAACAGGAAAAGAAAGTTGTAAGGAGGTTGGAACGCTTTATCATAG
TGTAAACAGCTTCTCAAATAACAAACAAACAATTTCTTACGAATGGACAC
TCATAAATATGATGATGCATGAAAAGATATCACTCATGGTTATATCTTTG
TTGAGTGGAGAGTTTAACATATGAGAGGAAGGATCGATCAAAAATGAGAT
GCAAAATGAATTTTATGTTTTTGGTAACTTTCATTGTTGTTTCATTCAAT
AAGCATGGTAAGTCCGTTAAAGTTTTGATTATACACGTTTTTTTTAAGAA
CATAGGCTTCGATGGCCAAAATGTTAAGAACAAGTGAAAAACATTTTAAG
GCTTTGCGGACTCTAGTGGGGTCGTTTAGCATAATTTACGGGAAAACAAT
AAGATCTAGCTGAAACTTTCTCCAGACCTTCTCTATAGGATGGTTATGCC
TTAGGAAAAATTCCCCTAAAATCCCACTGGTGGAACATCCCTTTTTTGGG
ACATTTCTTTTTTCCCCAGGCAAAACCCTAAGGGCGAAATTTTTTCGCCC
TTAGGATTTTGCCTAGGGAAAATAGAAATGACCCAAAATCATATAATTGG
TTGTTTTTTCATTCAAAAAACATTATTAATAGCAATGCCCACCATCAAGC
CATGTTTCAATTTTCAATAAAATTGATTTTTGAAGCTGGAACTACCGTAT
TTAAAAATCGCCGGAACAACCTATTTTCGCCGGAAAGACAGTATTTCAGT
ATGTCTCGAGCTGTACTTTATATATTTTTTATGAAATTCTGCACACTTTT
TTTTATAAGAACATCCCAAATTTTTGAAGCCTTCGTTTGGATGTTCTTAA
CTTTTTGAGTTTTAAGCCTAAAAATGTTCCTAACATGTTCTTATTTTGAC
CATTTTGTGAGTAATTTTGTCCATTTTCCTAAGAAATTGGGTGTTTTTGA
GTCCACAAAGCCTCAAAATGTCCTTAACTTGTTTTTAGCATTTTGGCCAT
TGAAGCCTTATGATCTTGAATAGTTTGTTCTTATAAAAAAACGTGTATTC
TTATAAAAACACACATTTTCTTTACATTCTAGTTTGGTCGTTGAAAGTGA
ATGTCCATCCACGATTGGCATTTCCAGTCAATGGTTCATCCTTTGAAGTT
TCATGTGAGGTTGACGGAAGCAAAGAACAGAAGCAACATGACATCAAATT
TGTCAATACGAATAATCAAGAATACACAAATACATCTTCCAGATCCATCA
TTCGTGAAAAAATGCAAAGTAAATTACATGCTTTTTTTTATAAGTATAAC
GTTTATAAGCATATGAAGGCTAAGTTTTTGGTACCTAAACAATATTGCTC
TATTTTGTCGGGGAGCAGAATCCAAAAATAGCATTTTTTTAACCCAAGAG
AAGAATGGGGTTGTTATATATTGCTGGAACGGAAAGTTTTATGCTGATTA
TGGAAACCCAGGTCGTAAAAAGGCTTGAGTTTGCAATCCTCTGTGGTGTT
TTTTCAATTTTACTTGTGTTAGAAAAATGCTGATTGTCAGCAAAGTAAAG
GGTTTTAGAATTCCATTTTTTAAAGAATAGACGATATCAGCTTTCCGAAT
TCTCCCCGAATGATTACCCGCGATGCACTGCGCAAAAAAATTCACGGACG
ATATCGACTTTCCGTGAATTTTTTTGCGCAATGCATCATGGGTAATCATT
CGGGGAGAATTCGGAAAGCTGATATCGTCTATTCTTTAAAAAATTTTTAA
CCAAATTTTAATTTATAAAGTATTCATTTGAGTTAGGCTCTACTAGGCTA
AAGGATTTAAAAAATCAAAAATTGATCTCCTTCGTTAAGGTTTTTTGACC
AAAACTCAGTCTTTTATTCGAAAAATATTTACAAAAGCAAAGGTTTTTAT
GAGTAAAATCACAAGTAAAAAAACCATTAAATGTTTTTAACTAAGAAATG
TAGGTAAGAAAGTATAGCGTTTTCAGCGCTTTCAAGATTTTTTTATATTT
ATGTATTTAGAAATTTACCTTGGAATACAGATATTCAGTCGCAACTTACC
ATGATCGATCAGATTTATCCTAGTGACTGAATCAGGATCAAAATTCCATT
CACTATATCAAGTGTGCACTGATTGAACAATGAGTAATTACAACATTGAC
AATATTTCTAAGTAGTACTAATTACTGCTATGAGGCAAATTTTGAAAATG
AAAAATGAAAATGAATATTTCACATTACAACAAATATTTCAGAATCTTTA
GAAACGTTAATAAATTGTTTATGTACCATTTTACTTTGAATTAAGCCCCC
CGAATAAACGCCTTTCCTGAAATCCAAAAAATTCAATAAAGGTCTGGGCG
TTTATATGAAGTGATCCGGGTAACACTGCAATAAATAACGATAATCAAAA
CTGATACTTATATACTTATGCTCTCTACTTCAGATGCTTTTGAGACGCGA
TCGAGGGTAGTTTGGAGTGAGATTGATACTACAAATGATGAGCATGGGAG
CTGTGAAGTCGATGATACTCTCTACTCGTTCAATATTTTCGTCATCCCAA
GTAAGTTCGAACTATCTTAACTTTTTTTGAAAAACAAACAGAAAAACTAT
GGCCAATTTTTATGTTTTTATTCTAGCTTCATGGGTTTTATATACCATTG
TTTTGGTATTTTTATATAATTTCAAGTTTGCGATATCCTCTTTTCTACTT
CACTGGGCTGAGCTCCATCAAAATCATCAGAAAGCAAAGTTCAGTTAGAA
GTAGCTCTATCTACTTTAGGCGTACAAACTTTCGCGAGTAGAAACTTTCG
TGAGGTCGAAGAATCGCGAAATCTACGACATTTACTTTCACGAATTTGAC
AAAAAAAAAAATTTCCGCCAGCATAAACTTTCGCGAATGAGGTAGATTTT
TAGTCGAGAATTCAAGTTTTCGGTGCATAAAACCAGTGTTTTGATCACTC
AAATGTATTCAAACCACAATTGATAGACTTTGGCATAATATCTATACTAA
ATTTTATCCTTGTTATCATCAAAGAGGAAAATTTGAGTAAATTTCCTTTT
CAGATTTTTTTTCGCGAGCAGAAACTTTCGCGAATTACCCTCTCGAGAAT
TTTCAAAGACATTTACTCTCGCGAAAATCGCGAAAGTTTCTGCTCGCAAA
AGTTTGTACGCCTGAAGTAGTCTACATTGTGTTCTACAAACTGATTTTAT
TTTTCAAACTTTAACAACAGAGGAAGGTAAACCTCGGATGTCAGTCAGTC
CACGCAAACCAGTGCCTGGTGTTCAAGGCGGAGATATATCATTTGAATGC
CATGCTGCTACTGACATATTTGAAAACATCAAAAACTTAACAATCTCCTG
GAAGAAAGGAAATGCATCAAACATGGAAGACTTATCAGACAACCAAACAA
AGATTGAGACACGTCAAGAGACTAGAGGCCGATCACTTCTCTTATCATCA
CGCTTAACCATACATGATTTACAAGTGGACAATGTTGGTTCGTATTTTTG
TGTAGCTGATCTCCACGTTGCTACGAAACGAGGAAATAAAGTGAATTCAA
GAAATATTTTTCATGAAGAAATAAAACTAATTAAAGGTATTATTCCTATG
GCGCGTGGAAGCGCCAGTAAATACTATCTTGTTTGATTTTTTTTTTAATG
AAAGTATCTCAGTTGAAGCAATGCGGAGGAGAGTGAAATTTGCCTCAGTT
ATCCAAAGAAACTAAAAAGGGGTGGGAGAAAGAAGCAACACAAAAATGCA
GCGCAGGGTATCCTTACACAACAAATTGGCAGACCAGAAAGCAGGTCATG
AGATAGACCATTTAAGATTATTAATGAAAGACAAGTTGCTGGTCATTGGT
CTAAAATGGAGAGAAACTGCTAACTTTAGTCCTTGTGACCTACATTGATA
GTTTTCTCGCTTTTCCGTGCAAGCATGTAACTAAACGCGTATGCGCATAT
GATAAAACTTGCTAGTAATCGAGACAATGTACTTTTTTCTTATAGTTGCA
TTTGAAATATGATAGTTTCTTTTTAAACAACATAAGCAGTTTGGTTTTAA
ACAAGATATCATTTATTGGCGCTTCCGCGCGCCATATATTTCAATGTTTA
CGCGCGCCATATATTTTAATGTTTATAAGTGAGAACCGTCTGATCCTTTG
AAATTCTGCTTAACTTGCAAAAACGTTGGCTGCAGAAACCAAGAAATTCA
CTGACGGCCGGGGAAAATCCCAAATGAACATGTCTGTGATGAATTAACTG
AAAGAATGAGTCATTTCTAGAGGAAGGTGTTTTGTCGTATCCCAAATAGG
CTGGAAGGTCCGAGCAAGAAGGGAGGGGTGCAAATACTTTTTTATAAACG
ATAGTAATTTTATGAGACTTTTTGGCACTTTGAGCCTTAAGTTTTATTTT
ATCTTGTTTGTAGGGCAAGACAAGCATTTTAGGTTCAAGACCCTATTTTT
GATACTTTTAATAACTATAATTTGGTTAAAATTCAGTCATTCCAGATTCA
GTATTGTTCTTATTTTTAGCATTTTTTTGAGCCTCATTATTTAGATTTCT
AGAGAGTTGAGATGAGAGTTCAACATTTTGAAAAAGTTAGTTGTACTTTT
GTAAAATAGATTCTGTATTGGCGTTTTCTTCGTTTAGCACCTCGTATGCG
AATTAATGTTTTGAAAATAAATTAGCATGTTTGGGGGTTTGATAGGAGCA
AGGGTTTGGGTTTTTTTTTGTCAAATAGTTACTAGTTCGGAGCACTTATA
TGTCTAAATATCATTTTAAGAGTGGACCATGTAAATAAATCAGGATAAAT
CAAACATGTAAAAAGCAAAAGATTATGTGAACCAAAAATCACCGTTACGT
TAAAGGTTTCATTTCAAAATTCTAGAAATATATCTAATCCGATGTCTCAA
AATCCTTGATTTTCAACTAAATATTTCACTTCTACTTTCCTTGTTGTTAC
AGTTACGAGCAAGAAGAATGGAGGTGGGTCGAGCAACGCTCAAAGTAATG
CACCAAGTTTCTACCTGTTTGTTTTGGTCCTCATCGTGAGGGTATTCTTA
CAGAGATAAATACTTATCATATTTTTTATAGACGATTTTTCATATTTTAA
TATATTTTTTGATTTTATAAATTTTGTAAATTTTACTTAATATACTTTTA
CTCTATAATATTTTACCATACAAAAATATAACTGAAAAGGACCATACGCA
GCTACAGGTACAGATTATAGTTTGTAAATTCACTCACTGGTCGAGAATTT
TATCTAACTTAAACTGCGCCAGGTCTGAATATTTACAGTGTTGATATTCC
TTAGGAATAAAAAAAGTAAATGTTGAGCCTCTCTAAGATCTATGTTCGAC
GTTACTAGAAAAGGGAAGCAACGACACCCTTCCTAAGATTGCGTTTATAC
TAACTACGCGTTAAAAGAAAAACTCATTTTTTAAAGACTTTTTCACAGCC
CCAGCATCAAAAATCGATAACTTTTAACTCAAACTTTTTCTTGAAAGGCT
GTAGTATCTGATCTCTCAAATTAAAGAAATTGTTTTCAAACTATCTACAC
TTCTTTAACCAGGACAGCGATCGGTCGAATCATTCTGTCATTTTCTGTAA
CATAAACGTTTCTTCCATCATAATGAACTTTCGTTTTTGACATATCCAGT
CTATTCATAAACATGGCTTTGATTCTTTTCCCATTATAATTAAATGTTTC
TGCGAAACTTTCAGCTGTTTCCCAATTTGGTGATGAATAGATTCCTTCCC
CATACTGTTGTCGTTCGCTACAACTGACGTCGTATCCCCCAGCAATGATC
TTTTCAATCGTCTTATGATCTTTTGGACCATGGTATGAAATAGCCCATTC
CCCAGGCAATGAACACTTCTCATTTACCCTTTCGCCTGGTCCAAACCAAA
CGTCGTTGACATATTTTCCTTTGATGTTCAGGGCGTATTTATTCCAACCA
TTTGGGCGGTTGAAGACATAACCACCTCTGGTGAATCCCGTTTCTTTGTC
TTTGCCATATTGATGGTCGTACCTGGAGTCAGTAGCGCTTTCTGGAATGA
AATCTAGACGTTCTAGATTAACCATTTTCACCTCTTCAAAATCTGTATTT
TTTTTCGACCTGTGTATATAAACCTTCTTATCCAGATAAATCTCCAACAG
CAAAAGGTCTTTGTGAAGCCAAATGAGGTTTAAATACCACCTAATTTTAA
AGGGAATTTCTATATAGCCTGGTGATGTAATGTTACAAAGCAAGAG Coding sequence (CDS) from alignment at sc0000100_pilon:595597..601892- >MSTRG.12943.1.p1 ID=MSTRG.12943.1.p1|Name=MSTRG.12943.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4200bp|location=Sequence derived from alignment at sc0000100_pilon:595597..601892- (Clytia hemisphaerica_ch_hm2_pilon)
TTACGAGCAAGAAGAATGGAGGTGGGTCGAGCAACGCTCAAAGTAATGCA
CCAAGTTTCTACCTGTTTGTTTTGGTCCTCATCGTGAGGGTATTCTTACA
GAGATAAAGGAAGGTAAACCTCGGATGTCAGTCAGTCCACGCAAACCAGT
GCCTGGTGTTCAAGGCGGAGATATATCATTTGAATGCCATGCTGCTACTG
ACATATTTGAAAACATCAAAAACTTAACAATCTCCTGGAAGAAAGGAAAT
GCATCAAACATGGAAGACTTATCAGACAACCAAACAAAGATTGAGACACG
TCAAGAGACTAGAGGCCGATCACTTCTCTTATCATCACGCTTAACCATAC
ATGATTTACAAGTGGACAATGTTGGTTCGTATTTTTGTGTAGCTGATCTC
CACGTTGCTACGAAACGAGGAAATAAAGTGAATTCAAGAAATATTTTTCA
TGAAGAAATAAAACTAATTAAAGATGCTTTTGAGACGCGATCGAGGGTAG
TTTGGAGTGAGATTGATACTACAAATGATGAGCATGGGAGCTGTGAAGTC
GATGATACTCTCTACTCGTTCAATATTTTCGTCATCCCAATTTGGTCGTT
GAAAGTGAATGTCCATCCACGATTGGCATTTCCAGTCAATGGTTCATCCT
TTGAAGTTTCATGTGAGGTTGACGGAAGCAAAGAACAGAAGCAACATGAC
ATCAAATTTGTCAATACGAATAATCAAGAATACACAAATACATCTTCCAG
ATCCATCATTCGTGAAAAAATGCAAAATGAGATGCAAAATGAATTTTATG
TTTTTGGTAACTTTCATTGTTGTTTCATTCAATAAGCATGTTACGAGCAA
GAAGAATGGAGGTGGGTCGAGCAACGCTCAAAGTAATGCACCAAGTTTCT
ACCTGTTTGTTTTGGTCCTCATCGTGAGGGTATTCTTACAGAGATAAAGG
AAGGTAAACCTCGGATGTCAGTCAGTCCACGCAAACCAGTGCCTGGTGTT
CAAGGCGGAGATATATCATTTGAATGCCATGCTGCTACTGACATATTTGA
AAACATCAAAAACTTAACAATCTCCTGGAAGAAAGGAAATGCATCAAACA
TGGAAGACTTATCAGACAACCAAACAAAGATTGAGACACGTCAAGAGACT
AGAGGCCGATCACTTCTCTTATCATCACGCTTAACCATACATGATTTACA
AGTGGACAATGTTGGTTCGTATTTTTGTGTAGCTGATCTCCACGTTGCTA
CGAAACGAGGAAATAAAGTGAATTCAAGAAATATTTTTCATGAAGAAATA
AAACTAATTAAAGATGCTTTTGAGACGCGATCGAGGGTAGTTTGGAGTGA
GATTGATACTACAAATGATGAGCATGGGAGCTGTGAAGTCGATGATACTC
TCTACTCGTTCAATATTTTCGTCATCCCAATTTGGTCGTTGAAAGTGAAT
GTCCATCCACGATTGGCATTTCCAGTCAATGGTTCATCCTTTGAAGTTTC
ATGTGAGGTTGACGGAAGCAAAGAACAGAAGCAACATGACATCAAATTTG
TCAATACGAATAATCAAGAATACACAAATACATCTTCCAGATCCATCATT
CGTGAAAAAATGCAAAATGAGATGCAAAATGAATTTTATGTTTTTGGTAA
CTTTCATTGTTGTTTCATTCAATAAGCATGTTACGAGCAAGAAGAATGGA
GGTGGGTCGAGCAACGCTCAAAGTAATGCACCAAGTTTCTACCTGTTTGT
TTTGGTCCTCATCGTGAGGGTATTCTTACAGAGATAAAGGAAGGTAAACC
TCGGATGTCAGTCAGTCCACGCAAACCAGTGCCTGGTGTTCAAGGCGGAG
ATATATCATTTGAATGCCATGCTGCTACTGACATATTTGAAAACATCAAA
AACTTAACAATCTCCTGGAAGAAAGGAAATGCATCAAACATGGAAGACTT
ATCAGACAACCAAACAAAGATTGAGACACGTCAAGAGACTAGAGGCCGAT
CACTTCTCTTATCATCACGCTTAACCATACATGATTTACAAGTGGACAAT
GTTGGTTCGTATTTTTGTGTAGCTGATCTCCACGTTGCTACGAAACGAGG
AAATAAAGTGAATTCAAGAAATATTTTTCATGAAGAAATAAAACTAATTA
AAGATGCTTTTGAGACGCGATCGAGGGTAGTTTGGAGTGAGATTGATACT
ACAAATGATGAGCATGGGAGCTGTGAAGTCGATGATACTCTCTACTCGTT
CAATATTTTCGTCATCCCAATTTGGTCGTTGAAAGTGAATGTCCATCCAC
GATTGGCATTTCCAGTCAATGGTTCATCCTTTGAAGTTTCATGTGAGGTT
GACGGAAGCAAAGAACAGAAGCAACATGACATCAAATTTGTCAATACGAA
TAATCAAGAATACACAAATACATCTTCCAGATCCATCATTCGTGAAAAAA
TGCAAAATGAGATGCAAAATGAATTTTATGTTTTTGGTAACTTTCATTGT
TGTTTCATTCAATAAGCATGTTACGAGCAAGAAGAATGGAGGTGGGTCGA
GCAACGCTCAAAGTAATGCACCAAGTTTCTACCTGTTTGTTTTGGTCCTC
ATCGTGAGGGTATTCTTACAGAGATAAAGGAAGGTAAACCTCGGATGTCA
GTCAGTCCACGCAAACCAGTGCCTGGTGTTCAAGGCGGAGATATATCATT
TGAATGCCATGCTGCTACTGACATATTTGAAAACATCAAAAACTTAACAA
TCTCCTGGAAGAAAGGAAATGCATCAAACATGGAAGACTTATCAGACAAC
CAAACAAAGATTGAGACACGTCAAGAGACTAGAGGCCGATCACTTCTCTT
ATCATCACGCTTAACCATACATGATTTACAAGTGGACAATGTTGGTTCGT
ATTTTTGTGTAGCTGATCTCCACGTTGCTACGAAACGAGGAAATAAAGTG
AATTCAAGAAATATTTTTCATGAAGAAATAAAACTAATTAAAGATGCTTT
TGAGACGCGATCGAGGGTAGTTTGGAGTGAGATTGATACTACAAATGATG
AGCATGGGAGCTGTGAAGTCGATGATACTCTCTACTCGTTCAATATTTTC
GTCATCCCAATTTGGTCGTTGAAAGTGAATGTCCATCCACGATTGGCATT
TCCAGTCAATGGTTCATCCTTTGAAGTTTCATGTGAGGTTGACGGAAGCA
AAGAACAGAAGCAACATGACATCAAATTTGTCAATACGAATAATCAAGAA
TACACAAATACATCTTCCAGATCCATCATTCGTGAAAAAATGCAAAATGA
GATGCAAAATGAATTTTATGTTTTTGGTAACTTTCATTGTTGTTTCATTC
AATAAGCATGTTACGAGCAAGAAGAATGGAGGTGGGTCGAGCAACGCTCA
AAGTAATGCACCAAGTTTCTACCTGTTTGTTTTGGTCCTCATCGTGAGGG
TATTCTTACAGAGATAAAGGAAGGTAAACCTCGGATGTCAGTCAGTCCAC
GCAAACCAGTGCCTGGTGTTCAAGGCGGAGATATATCATTTGAATGCCAT
GCTGCTACTGACATATTTGAAAACATCAAAAACTTAACAATCTCCTGGAA
GAAAGGAAATGCATCAAACATGGAAGACTTATCAGACAACCAAACAAAGA
TTGAGACACGTCAAGAGACTAGAGGCCGATCACTTCTCTTATCATCACGC
TTAACCATACATGATTTACAAGTGGACAATGTTGGTTCGTATTTTTGTGT
AGCTGATCTCCACGTTGCTACGAAACGAGGAAATAAAGTGAATTCAAGAA
ATATTTTTCATGAAGAAATAAAACTAATTAAAGATGCTTTTGAGACGCGA
TCGAGGGTAGTTTGGAGTGAGATTGATACTACAAATGATGAGCATGGGAG
CTGTGAAGTCGATGATACTCTCTACTCGTTCAATATTTTCGTCATCCCAA
TTTGGTCGTTGAAAGTGAATGTCCATCCACGATTGGCATTTCCAGTCAAT
GGTTCATCCTTTGAAGTTTCATGTGAGGTTGACGGAAGCAAAGAACAGAA
GCAACATGACATCAAATTTGTCAATACGAATAATCAAGAATACACAAATA
CATCTTCCAGATCCATCATTCGTGAAAAAATGCAAAATGAGATGCAAAAT
GAATTTTATGTTTTTGGTAACTTTCATTGTTGTTTCATTCAATAAGCATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000100_pilon | genome | sc0000100_pilon:595597..601892 - |
|
